Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 1.7e-59 232.6 130 100.0
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 2.0e-44 182.6 131 79.4
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 3.0e-40 168.7 127 77.2
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 7.3e-39 164.1 110 73.6
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.6e-38 162.9 124 66.1
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.1e-38 162.5 108 73.1
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 4.7e-38 161.4 123 74.0
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 1.1e-37 160.2 127 68.5
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.4e-37 159.8 109 69.7
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.8e-37 159.5 123 72.4
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 2.3e-37 159.1 127 70.9
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.1e-37 158.7 122 73.0
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 3.1e-37 158.7 123 74.8
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 4.0e-37 158.3 128 70.3
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 5.2e-37 157.9 111 70.3
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 8.9e-37 157.1 109 71.6
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 2.0e-36 156.0 110 68.2
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 2.0e-36 156.0 109 68.8
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 3.4e-36 155.2 123 69.9
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 3.4e-36 155.2 109 69.7
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 3.4e-36 155.2 110 67.3
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 4.4e-36 154.8 123 68.3
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 4.4e-36 154.8 128 69.5
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 4.4e-36 154.8 130 61.5
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 4.4e-36 154.8 130 66.9
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 4.4e-36 154.8 110 69.1
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 4.4e-36 154.8 109 65.1
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 4.4e-36 154.8 126 73.0
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 4.4e-36 154.8 110 71.8
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 5.8e-36 154.5 127 71.7
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 5.8e-36 154.5 110 67.3
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 5.8e-36 154.5 109 69.7
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 5.8e-36 154.5 123 68.3
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 7.5e-36 154.1 109 68.8
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 7.5e-36 154.1 128 71.1
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 7.5e-36 154.1 107 68.2
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 9.8e-36 153.7 109 67.0
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 9.8e-36 153.7 111 69.4
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 9.8e-36 153.7 123 69.1
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 9.8e-36 153.7 108 69.4
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 1.3e-35 153.3 109 67.0
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 1.3e-35 153.3 129 66.7
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 1.3e-35 153.3 129 62.0
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 1.7e-35 152.9 109 67.0
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 1.7e-35 152.9 107 70.1
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 1.7e-35 152.9 109 68.8
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 2.2e-35 152.5 108 66.7
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 2.2e-35 152.5 129 68.2
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 2.9e-35 152.1 109 67.9
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 2.9e-35 152.1 109 67.9
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 2.9e-35 152.1 129 69.0
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 3.7e-35 151.8 109 67.9
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 4.9e-35 151.4 108 66.7
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 8.3e-35 150.6 128 65.6
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 1.1e-34 150.2 108 67.6
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 1.1e-34 150.2 108 67.6
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 1.1e-34 150.2 108 67.6
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 1.9e-34 149.4 106 67.9
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 1.9e-34 149.4 106 67.9
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 3.2e-34 148.7 107 67.3
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.2e-34 148.7 129 66.7
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 4.1e-34 148.3 129 66.7
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 4.1e-34 148.3 129 66.7
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 5.4e-34 147.9 129 66.7
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 7.0e-34 147.5 106 67.9
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 7.0e-34 147.5 106 67.9
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 9.2e-34 147.1 127 59.8
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.2e-33 146.7 129 65.1
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.2e-33 146.7 146 61.6
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 2.7e-33 145.6 107 63.6
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 3.5e-33 145.2 128 60.9
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 1.0e-32 143.7 112 62.5
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 1.3e-32 143.3 116 62.9
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 1.3e-32 143.3 90 74.4
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 1.7e-32 142.9 110 64.5
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 2.3e-32 142.5 109 65.1
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 3.0e-32 142.1 108 63.0
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 5.1e-32 141.4 136 55.1
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 9.5e-31 137.1 100 69.0
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 2.3e-29 132.5 110 59.1
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 2.6e-28 129.0 194 47.4
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 1.7e-27 126.3 92 71.7
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 2.2e-27 125.9 103 60.2
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 3.7e-27 125.2 129 54.3
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 8.3e-27 124.0 96 66.7
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 3.2e-26 122.1 124 62.9
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 5.6e-23 111.3 94 71.3
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 9.5e-23 110.5 89 61.8
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 9.5e-23 110.5 89 61.8
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 4.7e-22 108.2 93 69.9
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 4.7e-22 108.2 89 60.7
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 6.2e-22 107.8 89 61.8
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.8e-21 106.3 108 63.0
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 3.1e-21 105.5 89 57.3
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 6.8e-21 104.4 89 57.3
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 6.8e-21 104.4 89 56.2
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 8.9e-21 104.0 89 59.6
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 2.0e-20 102.8 108 45.4
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 2.6e-20 102.4 89 56.2
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 3.4e-20 102.1 89 55.1
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 4.4e-20 101.7 89 56.2
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 4.4e-20 101.7 108 45.4
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 4.4e-20 101.7 71 67.6
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 5.8e-20 101.3 89 57.3
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 9.9e-20 100.5 89 57.3
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.3e-19 100.1 87 56.3
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 1.3e-19 100.1 87 56.3
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.2e-19 99.4 89 57.3
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 2.2e-19 99.4 111 53.2
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 2.2e-19 99.4 102 51.0
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 2.9e-19 99.0 103 51.5
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 3.8e-19 98.6 107 49.5
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 3.8e-19 98.6 104 51.0
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 4.9e-19 98.2 85 57.6
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 4.9e-19 98.2 87 55.2
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 6.4e-19 97.8 89 56.2
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 8.4e-19 97.4 90 57.8
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 8.4e-19 97.4 108 47.2
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 1.1e-18 97.1 64 75.0
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 1.4e-18 96.7 103 56.3
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 1.4e-18 96.7 108 51.9
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 1.4e-18 96.7 105 51.4
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 1.9e-18 96.3 89 58.4
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 1.9e-18 96.3 80 73.8
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 3.2e-18 95.5 107 54.2
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 4.2e-18 95.1 82 73.2
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 4.2e-18 95.1 87 55.2
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 7.1e-18 94.4 105 56.2
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 7.1e-18 94.4 105 49.5
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 7.1e-18 94.4 105 49.5
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 9.2e-18 94.0 89 51.7
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 1.2e-17 93.6 86 57.0
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 1.2e-17 93.6 86 57.0
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 1.2e-17 93.6 87 54.0
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 1.6e-17 93.2 108 49.1
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 1.6e-17 93.2 100 59.0
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 2.7e-17 92.4 110 53.6
RhsimUnG0040800 Rhododendron simsii HOM05D004087 ORTHO05D004787 2.7e-17 92.4 100 51.0
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 2.7e-17 92.4 60 71.7
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 7.8e-17 90.9 103 55.3
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 7.8e-17 90.9 90 53.3
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 1.0e-16 90.5 60 76.7
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.3e-16 90.1 87 51.7
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 1.7e-16 89.7 68 67.6
Haze_10292 Corylus avellana HOM05D004087 ORTHO05D004787 3.0e-16 89.0 192 34.4
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 3.0e-16 89.0 89 52.8
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 3.9e-16 88.6 87 50.6
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 3.9e-16 88.6 87 50.6
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 4.3e-15 85.1 89 51.7
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 5.6e-15 84.7 76 57.9
AUR62030868 Chenopodium quinoa HOM05D004087 ORTHO05D004787 7.3e-15 84.3 91 52.7
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 1.6e-14 83.2 89 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 2.0e-12 76.3 96 43.8
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 1.9e-10 69.7 87 35.6
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 4.2e-10 68.6 61 59.0
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 2.1e-09 66.2 63 57.1
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 3.5e-09 65.5 56 57.1
Lj5A221T58 Lonicera japonica HOM05D004087 ORTHO05D004787 4.6e-09 65.1 39 79.5
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 3.0e-08 62.4 102 45.1
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 1.5e-07 60.1 53 60.4
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 2.5e-07 59.3 52 57.7
Os02g0531900 Oryza sativa ssp. japonica HOM05D004087 ORTHO05D004787 4.3e-07 58.5 63 55.6
Lsat_1_v5_gn_3_112521 Lactuca sativa HOM05D004087 ORTHO05D004787 3.6e-06 55.5 78 57.7
Lsat_1_v5_gn_9_118200 Lactuca sativa HOM05D004087 ORTHO05D004787 3.6e-06 55.5 78 57.7
Cpa.g.sc106.30 Carica papaya HOM05D004087 ORTHO05D004787 8.1e-06 54.3 56 67.9


User provided reference genes

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