Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028758.1 Olea europaea HOM05D000216 ORTHO05D000634 8.3e-31 136.3 66 100.0
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 1.0e-09 66.2 40 80.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 6.8e-09 63.5 40 77.5
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.4e-08 61.2 40 77.5
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.4e-08 61.2 40 72.5
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 4.4e-08 60.8 40 75.0
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.3e-07 59.3 40 72.5
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.7e-07 58.9 40 70.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.2e-07 58.5 38 71.1
Nn092s42879 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.7e-07 57.8 40 67.5
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 6.4e-07 57.0 40 72.5
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 6.4e-07 57.0 34 79.4
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 8.3e-07 56.6 33 78.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.1e-06 56.2 41 58.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.1e-06 56.2 41 58.5
CSS0009554 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 1.9e-06 55.5 30 83.3
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 1.9e-06 55.5 40 65.0
Oeu023333.1 Olea europaea HOM05D000216 ORTHO05D000634 2.4e-06 55.1 38 71.1
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 2.4e-06 55.1 40 60.0
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.1e-06 54.3 39 71.8
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 7.0e-06 53.5 40 65.0
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 7.0e-06 53.5 40 62.5


User provided reference genes

Program Settings