Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027937.2 Olea europaea HOM05D005205 ORTHO05D006155 6.2e-217 757.3 412 100.0
Oeu006323.1 Olea europaea HOM05D005205 ORTHO05D006155 2.1e-132 476.5 419 70.9
SGA_v2.0_scaffold34G13663 Striga asiatica HOM05D005205 ORTHO05D006155 5.4e-112 408.7 408 58.6
MSTRG.2087 Avicennia marina HOM05D005205 ORTHO05D006155 5.6e-109 398.7 399 61.2
Cc11_g00390 Coffea canephora HOM05D005205 ORTHO05D006155 9.5e-109 397.9 324 66.7
Migut.E00589 Erythranthe guttata HOM05D005205 ORTHO05D006155 3.4e-106 389.4 412 56.3
Dinv17655 Davidia involucrata HOM05D005205 ORTHO05D006155 8.3e-105 384.8 382 62.6
Actinidia18451 Actinidia chinensis HOM05D005205 ORTHO05D006155 3.2e-104 382.9 325 64.3
Ciclev10015886m.g Citrus clementina HOM05D005205 ORTHO05D006155 1.5e-101 374.0 325 62.5
TWI53G0012 Tripterygium wilfordii HOM05D005205 ORTHO05D006155 3.3e-101 372.9 324 61.7
CSS0009404 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 4.3e-101 372.5 326 63.2
CSS0028662 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 7.3e-101 371.7 326 63.2
Manes.04G160800 Manihot esculenta HOM05D005205 ORTHO05D006155 9.5e-101 371.3 324 62.3
Solyc02g049070.4 Solanum lycopersicum HOM05D005205 ORTHO05D006155 2.8e-100 369.8 324 62.3
MD16G1004900 Malus domestica HOM05D005205 ORTHO05D006155 6.2e-100 368.6 325 60.3
Haze_17397 Corylus avellana HOM05D005205 ORTHO05D006155 1.1e-99 367.9 416 53.4
Nitab4.5_0003034g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 1.4e-99 367.5 322 62.1
Thecc.02G152000 Theobroma cacao HOM05D005205 ORTHO05D006155 2.3e-99 366.7 325 62.2
SalBow2G1531 Salvia bowleyana HOM05D005205 ORTHO05D006155 4.0e-99 365.9 416 54.6
ClCG11G012770 Citrullus lanatus HOM05D005205 ORTHO05D006155 6.8e-99 365.2 325 60.6
PGR044G0613 Punica granatum HOM05D005205 ORTHO05D006155 6.8e-99 365.2 324 60.8
TAR622G1118 Trochodendron aralioides HOM05D005205 ORTHO05D006155 1.2e-98 364.4 323 61.3
FvH4_4g37340 Fragaria vesca HOM05D005205 ORTHO05D006155 1.5e-98 364.0 324 60.8
GSVIVG01034351001 Vitis vinifera HOM05D005205 ORTHO05D006155 1.5e-98 364.0 325 60.9
Prupe.1G351900 Prunus persica HOM05D005205 ORTHO05D006155 2.0e-98 363.6 325 59.7
COL.COLO4_33151 Corchorus olitorius HOM05D005205 ORTHO05D006155 2.6e-98 363.2 323 61.9
Duzib248G0811 Durio zibethinus HOM05D005205 ORTHO05D006155 2.6e-98 363.2 325 61.8
Sopen02g008300 Solanum pennellii HOM05D005205 ORTHO05D006155 2.6e-98 363.2 410 54.1
CiPaw.16G000600 Carya illinoinensis HOM05D005205 ORTHO05D006155 5.8e-98 362.1 419 53.0
DCAR_023495 Daucus carota HOM05D005205 ORTHO05D006155 5.8e-98 362.1 324 61.7
Lj3A844T51 Lonicera japonica HOM05D005205 ORTHO05D006155 7.5e-98 361.7 324 61.1
Potri.010G254800 Populus trichocarpa HOM05D005205 ORTHO05D006155 7.5e-98 361.7 332 61.1
FAN17G1859 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.3e-97 360.9 324 60.2
Gorai.005G213800 Gossypium raimondii HOM05D005205 ORTHO05D006155 1.3e-97 360.9 325 60.6
Nn3g18536 Nelumbo nucifera HOM05D005205 ORTHO05D006155 1.7e-97 360.5 325 59.7
RcHm_v2.0_Chr4g0447201 Rosa chinensis HOM05D005205 ORTHO05D006155 2.2e-97 360.1 325 60.0
CsaV3_5G029150 Cucumis sativus L. HOM05D005205 ORTHO05D006155 2.9e-97 359.8 324 59.9
Gohir.D02G191000 Gossypium hirsutum HOM05D005205 ORTHO05D006155 2.9e-97 359.8 325 60.6
Atru.chr11.38 Acer truncatum HOM05D005205 ORTHO05D006155 3.7e-97 359.4 325 59.1
MELO3C011767.2 Cucumis melo HOM05D005205 ORTHO05D006155 8.3e-97 358.2 325 59.1
Nitab4.5_0000067g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 8.3e-97 358.2 412 55.1
Eucgr.J00330 Eucalyptus grandis HOM05D005205 ORTHO05D006155 1.4e-96 357.5 325 59.4
FAN07G0818 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.4e-96 357.5 324 59.6
Glyma.09G286000 Glycine max HOM05D005205 ORTHO05D006155 1.9e-96 357.1 324 59.0
MD13G1000800 Malus domestica HOM05D005205 ORTHO05D006155 1.9e-96 357.1 325 59.7
THA.LOC104800388 Tarenaya hassleriana HOM05D005205 ORTHO05D006155 1.9e-96 357.1 330 59.1
Sc06g0007780 Simmondsia chinensis HOM05D005205 ORTHO05D006155 2.4e-96 356.7 324 60.2
Duzib052G0598 Durio zibethinus HOM05D005205 ORTHO05D006155 3.2e-96 356.3 325 60.6
Gohir.A03G167900 Gossypium hirsutum HOM05D005205 ORTHO05D006155 3.2e-96 356.3 325 60.0
Phvul.003G000300 Phaseolus vulgaris HOM05D005205 ORTHO05D006155 5.4e-96 355.5 324 59.0
Sed0014845 Sechium edule HOM05D005205 ORTHO05D006155 5.4e-96 355.5 325 59.1
MBI03_g11900_MAGBIO Magnolia biondii HOM05D005205 ORTHO05D006155 9.2e-96 354.8 325 57.8
QL01p000318 Quercus lobata HOM05D005205 ORTHO05D006155 9.2e-96 354.8 325 60.6
Sabra10G0198100 Salix brachista HOM05D005205 ORTHO05D006155 1.2e-95 354.4 331 59.8
PSO782G4176 Papaver somniferum HOM05D005205 ORTHO05D006155 1.6e-95 354.0 325 58.8
PSO063G1005 Papaver somniferum HOM05D005205 ORTHO05D006155 3.5e-95 352.8 325 58.5
Aqoxy3G04336 Aquilegia oxysepala HOM05D005205 ORTHO05D006155 6.0e-95 352.1 324 59.3
VMungo0251G0539 Vigna mungo HOM05D001906 ORTHO05D002083 1.7e-94 350.5 324 58.3
Lalb_Chr04g0259081 Lupinus albus HOM05D005205 ORTHO05D006155 2.3e-94 350.1 325 58.2
Glyma.20G000300 Glycine max HOM05D005205 ORTHO05D006155 3.0e-94 349.7 325 56.9
arahy.Tifrunner.gnm1.ann1.LXEK1C Arachis hypogaea HOM05D005205 ORTHO05D006155 5.1e-94 349.0 328 58.5
Cfa018669 Carpinus fangiana HOM05D001610 ORTHO05D001585 5.1e-94 349.0 320 60.6
Lj2g0013395 Lotus japonicus HOM05D005205 ORTHO05D006155 6.6e-94 348.6 325 57.5
Sed0020094 Sechium edule HOM05D005205 ORTHO05D006155 6.6e-94 348.6 325 58.5
arahy.Tifrunner.gnm1.ann1.JXP1KB Arachis hypogaea HOM05D005205 ORTHO05D006155 1.1e-93 347.8 328 58.2
Ca_12345_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 7.3e-93 345.1 325 57.8
CANSAT78G1147 Cannabis sativa HOM05D005205 ORTHO05D006155 2.8e-92 343.2 407 50.1
unitig_27.g25294 Utricularia gibba HOM05D005205 ORTHO05D006155 1.4e-91 340.9 407 53.1
ECA246G5176 Erigeron canadensis HOM05D005205 ORTHO05D006155 8.9e-91 338.2 325 57.2
Ah.01g011460 Amaranthus hybridus HOM05D005205 ORTHO05D006155 2.0e-90 337.0 324 56.2
ATR0124G008 Amborella trichopoda HOM05D005205 ORTHO05D006155 3.7e-89 332.8 324 54.3
HanXRQChr04g0099271 Helianthus annuus HOM05D005205 ORTHO05D006155 4.9e-89 332.4 325 56.9
Lalb_Chr10g0094691 Lupinus albus HOM05D005205 ORTHO05D006155 6.4e-89 332.0 325 54.8
Aa31LG3G17990 Aethionema arabicum HOM05D005205 ORTHO05D006155 7.1e-88 328.6 325 56.0
AUR62017757 Chenopodium quinoa HOM05D005205 ORTHO05D006155 7.1e-88 328.6 326 55.2
HanXRQChr06g0171581 Helianthus annuus HOM05D005205 ORTHO05D006155 7.1e-88 328.6 318 56.9
AUR62032894 Chenopodium quinoa HOM05D005205 ORTHO05D006155 1.7e-86 323.9 326 54.6
HPP92_007317 Vanilla planifolia HOM05D005205 ORTHO05D006155 2.3e-86 323.6 324 54.6
Os04g0527800 Oryza sativa ssp. japonica HOM05D005205 ORTHO05D006155 5.1e-86 322.4 322 51.9
Cpa.g.sc221.15 Carica papaya HOM05D005205 ORTHO05D006155 3.3e-85 319.7 325 56.0
A10p28180 Brassica napus HOM05D005205 ORTHO05D006155 4.3e-85 319.3 319 54.2
BraA10t44867Z Brassica rapa HOM05D005205 ORTHO05D006155 4.3e-85 319.3 319 54.2
BcaB08g37247 Brassica carinata HOM05D005205 ORTHO05D006155 5.6e-85 318.9 319 53.9
Thhalv10013959m.g Eutrema salsugineum HOM05D005205 ORTHO05D006155 5.6e-85 318.9 319 54.5
C09p68390 Brassica napus HOM05D005205 ORTHO05D006155 7.3e-85 318.5 319 53.9
BolC9t59586H Brassica oleracea HOM05D005205 ORTHO05D006155 7.3e-85 318.5 319 53.9
AT5G08540 Arabidopsis thaliana HOM05D005205 ORTHO05D006155 2.1e-84 317.0 325 53.8
EL10Ac9g23020 Beta vulgaris HOM05D005205 ORTHO05D006155 3.6e-84 316.2 326 53.7
Carub.0006s0750 Capsella rubella HOM05D005205 ORTHO05D006155 2.4e-83 313.5 319 54.2
Sp6g34350 Schrenkiella parvula HOM05D005205 ORTHO05D006155 2.4e-83 313.5 325 53.5
AL6G19250 Arabidopsis lyrata HOM05D005205 ORTHO05D006155 4.0e-83 312.8 382 50.3
CARHR204440 Cardamine hirsuta HOM05D005205 ORTHO05D006155 1.2e-82 311.2 318 53.8
RcHm_v2.0_Chr6g0263291 Rosa chinensis HOM05D005205 ORTHO05D006155 1.3e-76 291.2 257 61.1
Lsat_1_v5_gn_3_35240 Lactuca sativa HOM05D005205 ORTHO05D006155 4.8e-76 289.3 218 66.5
Medtr1g039490 Medicago truncatula HOM05D005205 ORTHO05D006155 1.1e-75 288.1 292 59.2
C03p04410 Brassica napus HOM05D005205 ORTHO05D006155 1.8e-75 287.3 388 51.0
BolC3t12972H Brassica oleracea HOM05D005205 ORTHO05D006155 9.0e-75 285.0 388 50.5
BcaB01g05587 Brassica carinata HOM05D005205 ORTHO05D006155 1.5e-74 284.3 313 49.8
BraA03t09738Z Brassica rapa HOM05D005205 ORTHO05D006155 2.0e-74 283.9 319 48.6
A03p03920 Brassica napus HOM05D005205 ORTHO05D006155 4.4e-74 282.7 392 49.5
Peaxi162Scf00655g00330 Petunia axillaris HOM05D005205 ORTHO05D006155 1.9e-72 277.3 324 51.9
Zm00001eb076700 Zea mays HOM05D005205 ORTHO05D006155 3.8e-65 253.1 325 44.3
RcHm_v2.0_Chr1g0316621 Rosa chinensis HOM05D005205 ORTHO05D006155 8.4e-65 251.9 163 76.1
SMO367G0125 Selaginella moellendorffii HOM05D005205 ORTHO05D006155 1.4e-59 234.6 324 38.6
Mapoly0169s0014 Marchantia polymorpha HOM05D005205 ORTHO05D006155 4.0e-59 233.0 327 39.8
Pp3c3_33330 Physcomitrium patens HOM05D005205 ORTHO05D006155 2.0e-58 230.7 324 40.4
FAN28G1115 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.3e-57 228.0 170 69.4
FAN03G0776 Fragaria x ananassa HOM05D005205 ORTHO05D006155 2.5e-53 213.8 185 62.7
Rhsim04G0130700 Rhododendron simsii HOM05D005205 ORTHO05D006155 1.4e-51 208.0 166 64.5
vmacro08834 Vaccinium macrocarpon HOM05D005205 ORTHO05D006155 1.8e-51 207.6 151 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2354 Anthoceros agrestis HOM05D005205 ORTHO05D006155 2.4e-51 207.2 214 49.5
CBR_g39443 Chara braunii HOM05D005205 ORTHO05D006155 5.7e-45 186.0 318 36.2
CDE05G2447 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 2.8e-44 183.7 216 49.1
TPR.G30235 Trifolium pratense HOM05D005205 ORTHO05D006155 2.4e-43 180.6 177 58.2
Hma1.2p1_3386F.1_g335770 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 9.0e-43 178.7 184 57.6
RcHm_v2.0_Chr4g0403031 Rosa chinensis HOM05D005205 ORTHO05D006155 5.1e-38 162.9 161 58.4
Ca_12346_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 1.4e-35 154.8 107 68.2
Psat0s5832g0080 Pisum sativum HOM05D005205 ORTHO05D006155 1.8e-35 154.5 107 67.3
Nn1g04118 Nelumbo nucifera HOM05D005205 ORTHO05D006155 3.8e-33 146.7 197 45.7
FAN14G4394 Fragaria x ananassa HOM05D005205 ORTHO05D006155 2.5e-32 144.1 104 67.3
SEGI_15080 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 3.6e-31 140.2 104 63.5
HanXRQChr01g0001451 Helianthus annuus HOM05D005205 ORTHO05D006155 3.1e-27 127.1 120 58.3
RcHm_v2.0_Chr3g0483731 Rosa chinensis HOM05D005205 ORTHO05D006155 3.1e-27 127.1 96 65.6
CDE05G2109 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 1.2e-26 125.2 72 76.4
BcaB01g05586 Brassica carinata HOM05D005205 ORTHO05D006155 1.6e-26 124.8 119 56.3
Hma1.2p1_3386F.1_g335780 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 1.9e-24 117.9 139 51.1
RcHm_v2.0_Chr3g0483721 Rosa chinensis HOM05D005205 ORTHO05D006155 1.8e-22 111.3 69 73.9
Oeu063552.2 Olea europaea HOM05D000198 ORTHO05D003232 6.3e-20 102.8 56 82.1
Cc00_g03890 Coffea canephora HOM05D005205 ORTHO05D006155 1.1e-19 102.1 136 45.6
SHI21163 Sapria himalayana HOM05D005205 ORTHO05D006155 2.4e-19 100.9 78 57.7
FAN01G2591 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.2e-18 98.6 97 55.7
TPR.G15012 Trifolium pratense HOM05D005205 ORTHO05D006155 1.3e-17 95.1 56 83.9
Nn7g36511 Nelumbo nucifera HOM05D005205 ORTHO05D006155 2.5e-16 90.9 151 41.1
PRCOL_00005587 Prasinoderma coloniale HOM05D005205 ORTHO05D006155 3.4e-13 80.5 274 22.6
Nn5g29101 Nelumbo nucifera HOM05D005205 ORTHO05D006155 1.7e-12 78.2 90 52.2
SEGI_28687 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 1.7e-12 78.2 141 38.3
SHI21160 Sapria himalayana HOM05D005205 ORTHO05D006155 2.4e-11 74.3 144 36.1
MBI16_g05633_MAGBIO Magnolia biondii HOM05D000869 ORTHO05D000685 2.0e-10 71.2 116 36.2
Sabra08G0000800 Salix brachista HOM05D005205 ORTHO05D006155 2.7e-10 70.9 61 60.7
Cre09.g402950 Chlamydomonas reinhardtii HOM05D005205 ORTHO05D006155 3.8e-09 67.0 181 28.2
SHI21161 Sapria himalayana HOM05D005205 ORTHO05D006155 6.5e-09 66.2 39 71.8
Psat5g249280 Pisum sativum HOM05D005205 ORTHO05D006155 1.1e-08 65.5 35 88.6
Oeu044544.2 Olea europaea HOM05D000251 ORTHO05D000414 4.2e-08 63.5 45 71.1
Mapoly0067s0102 Marchantia polymorpha HOM05D005205 ORTHO05D006155 5.5e-08 63.2 151 29.1
SalBow1G0093 Salvia bowleyana HOM05D005205 ORTHO05D006155 1.2e-07 62.0 53 64.2
TPR.G39699 Trifolium pratense HOM05D005205 ORTHO05D006155 1.2e-07 62.0 106 37.7
Mapoly0067s0101 Marchantia polymorpha HOM05D005205 ORTHO05D006155 8.0e-07 59.3 203 23.2


User provided reference genes

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