Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 8.6e-120 433.7 226 100.0
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 7.5e-108 394.0 226 91.6
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 4.8e-78 295.0 226 66.8
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 3.8e-67 258.8 227 63.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.1e-66 257.3 224 62.1
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.9e-66 256.5 226 61.5
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 3.2e-66 255.8 223 61.9
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 9.3e-66 254.2 226 62.4
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.2e-65 253.8 226 63.7
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 4.6e-65 251.9 241 59.3
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.3e-64 249.6 227 59.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 8.7e-64 247.7 226 61.5
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.3e-62 243.8 228 60.5
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 3.7e-62 242.3 226 58.0
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.4e-61 240.4 226 59.7
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.8e-61 240.0 227 60.4
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.8e-61 240.0 225 57.8
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 3.1e-61 239.2 227 60.4
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.1e-61 239.2 227 59.9
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 4.0e-61 238.8 227 61.2
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.2e-60 237.3 226 60.6
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.2e-60 237.3 230 59.6
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.5e-60 236.9 230 60.0
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.0e-60 236.5 225 59.6
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.3e-59 233.8 226 58.8
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.3e-59 233.8 226 58.8
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.5e-58 229.6 226 58.0
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 3.2e-58 229.2 228 58.8
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.1e-57 226.5 223 58.3
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 2.1e-57 226.5 232 57.3
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 4.6e-57 225.3 229 57.2
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 6.0e-57 224.9 228 56.6
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.9e-55 219.9 225 59.1
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 3.3e-55 219.2 227 55.9
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 3.3e-55 219.2 228 56.1
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.6e-54 216.9 228 56.1
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 3.7e-54 215.7 226 56.6
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 6.3e-54 214.9 229 56.8
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.1e-53 214.2 225 57.8
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.4e-53 213.8 222 55.0
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.8e-53 213.4 228 55.3
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.1e-53 212.2 229 55.9
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 5.3e-53 211.8 230 54.8
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 2.0e-52 209.9 238 55.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 3.4e-52 209.1 219 54.3
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.5e-52 208.8 228 50.4
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.7e-51 206.8 231 54.1
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.8e-51 205.7 228 53.5
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 3.8e-51 205.7 227 48.0
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 5.0e-51 205.3 179 63.7
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 8.4e-51 204.5 229 54.1
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 8.4e-51 204.5 232 53.9
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.1e-50 204.1 223 58.3
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.4e-50 203.8 233 53.6
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.5e-50 203.0 224 51.3
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 3.2e-50 202.6 174 63.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.2e-49 200.7 229 52.8
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.6e-49 200.3 271 46.9
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.1e-49 199.9 224 55.8
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 7.9e-49 198.0 227 52.0
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.5e-47 193.7 229 50.2
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 7.4e-47 191.4 227 48.9
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.6e-46 190.3 222 50.5
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 3.7e-46 189.1 224 51.3
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.1e-45 186.0 226 48.2
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 4.1e-45 185.7 228 51.3
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 5.3e-45 185.3 232 46.6
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 9.0e-45 184.5 229 50.7
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 9.0e-45 184.5 229 50.7
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.2e-44 184.1 226 48.2
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 1.5e-44 183.7 222 50.0
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.5e-44 183.7 226 48.2
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 2.6e-44 183.0 226 49.1
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 2.6e-44 183.0 230 50.9
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 2.6e-44 183.0 231 48.5
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 5.9e-44 181.8 228 50.0
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 5.9e-44 181.8 228 48.7
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.7e-43 180.3 226 48.2
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 5.0e-43 178.7 226 48.2
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 8.5e-43 177.9 228 48.2
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.1e-42 177.6 222 49.5
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 3.2e-42 176.0 202 53.5
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 4.2e-42 175.6 226 50.4
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 4.2e-42 175.6 223 49.3
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 9.4e-42 174.5 225 51.1
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 3.6e-41 172.6 242 45.9
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 4.6e-41 172.2 229 46.7
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.0e-40 171.0 232 45.3
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 3.0e-40 169.5 129 69.8
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 6.7e-40 168.3 224 44.6
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 8.8e-40 167.9 226 46.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.1e-39 167.5 161 59.6
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 8.2e-38 161.4 226 42.9
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.4e-37 160.6 127 66.1
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.6e-36 156.4 229 45.9
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.7e-36 154.8 240 45.0
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 8.5e-35 151.4 219 44.7
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.6e-33 147.1 328 37.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.6e-33 146.0 181 51.4
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 4.4e-31 139.0 228 42.1
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 3.7e-30 136.0 228 39.0
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 6.3e-30 135.2 228 39.5
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 8.2e-30 134.8 228 37.7
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.6e-28 129.8 133 51.1
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 2.1e-25 120.2 225 36.4
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.7e-25 119.8 123 52.0
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 6.1e-25 118.6 123 52.8
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.6e-17 92.8 237 31.2
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.4e-16 90.9 56 75.0
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.8e-16 90.5 242 30.6
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 2.2e-14 83.6 223 32.7
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.8e-14 82.4 117 47.0
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 3.8e-11 72.8 96 47.9
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 5.5e-10 68.9 101 41.6
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 3.6e-09 66.2 98 50.0
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 4.7e-09 65.9 88 42.0
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 8.0e-09 65.1 101 47.5
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 8.0e-09 65.1 199 34.7
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.2e-07 61.2 49 61.2
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 2.6e-07 60.1 88 33.0
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 2.2e-06 57.0 88 33.0
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 2.8e-06 56.6 79 39.2
AT5G55856 Arabidopsis thaliana HOM05D000984 ORTHO05D001096 6.3e-06 55.5 77 32.5


User provided reference genes

Program Settings