Gene: AT5G55856

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G55856
  • Transcript Identifier AT5G55856.1
  • Gene Type Coding gene
  • Location Chr5 : 22607927-22608640 : positive

Gene Family Information

  • ID HOM05D000984
  • #Genes/#Species 611/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G55856.1
  • uniprot B3H5R8

Descriptions

  • Description Ubiquitin-like superfamily protein
  • Computational description Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 (TAIR:AT4G26840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016925
IBA
Gene Ontologyprotein sumoylation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044389
IBA
Gene Ontologyubiquitin-like protein ligase binding1
GO:0031386
IBA
Gene Ontologyprotein tag1
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000984

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022617 Rad60/SUMO-like domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.2.2.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).ubiquitin-fold protein (SUMO)