Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 8.6e-152 540.4 300 100.0
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.9e-82 310.1 307 59.6
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 2.0e-79 300.1 298 60.4
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.1e-74 284.3 299 55.5
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.6e-73 280.4 302 55.0
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 3.6e-73 279.3 303 54.1
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 6.1e-73 278.5 302 54.6
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.8e-72 276.9 303 53.8
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 5.2e-72 275.4 312 54.5
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.4e-71 272.7 307 57.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 5.7e-71 271.9 301 53.5
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 2.8e-70 269.6 301 51.5
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 2.4e-69 266.5 302 55.6
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 1.6e-68 263.8 303 56.1
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.6e-68 263.8 303 55.4
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 2.9e-67 259.6 303 49.8
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 8.5e-67 258.1 301 50.5
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 4.2e-66 255.8 304 51.0
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 4.2e-66 255.8 304 52.6
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 4.2e-66 255.8 303 53.1
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 1.2e-65 254.2 311 49.8
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 8.0e-65 251.5 306 54.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.8e-64 250.4 303 54.5
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 3.0e-64 249.6 303 54.5
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 3.0e-64 249.6 307 50.8
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 4.0e-64 249.2 302 54.6
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 5.2e-64 248.8 307 54.7
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 7.5e-63 245.0 312 51.3
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 7.5e-63 245.0 299 48.2
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 9.8e-63 244.6 308 50.6
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 2.8e-62 243.0 314 54.1
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 6.3e-62 241.9 246 64.2
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 8.3e-62 241.5 385 43.1
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 1.4e-61 240.7 286 52.4
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 1.8e-61 240.4 352 45.7
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 3.1e-61 239.6 311 48.2
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 5.4e-61 238.8 245 58.0
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 9.2e-61 238.0 298 48.7
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.2e-60 237.7 305 46.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 3.5e-60 236.1 215 61.4
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 4.5e-60 235.7 302 53.0
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 7.7e-60 235.0 295 48.5
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.0e-59 234.6 366 43.7
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.3e-59 234.2 297 46.1
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.8e-59 232.6 297 47.5
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 3.8e-59 232.6 294 51.7
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 7.3e-58 228.4 301 46.2
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 1.2e-57 227.6 242 58.3
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 2.1e-57 226.9 259 52.1
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 2.8e-57 226.5 253 56.1
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 6.1e-57 225.3 274 54.4
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.0e-56 224.6 209 57.9
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.4e-56 224.2 249 51.8
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 6.8e-56 221.9 211 57.3
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.2e-55 221.1 245 57.6
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.5e-55 220.7 300 50.0
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 2.0e-55 220.3 296 50.3
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 2.0e-55 220.3 218 62.8
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 3.4e-55 219.5 213 56.3
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 4.4e-55 219.2 261 49.4
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 7.5e-55 218.4 297 47.5
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 7.5e-55 218.4 308 45.5
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 7.5e-55 218.4 237 50.6
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 7.5e-55 218.4 209 58.4
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 9.8e-55 218.0 285 50.2
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.3e-54 217.6 306 46.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 2.2e-54 216.9 210 60.0
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.9e-54 216.5 210 53.8
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.9e-54 216.5 309 51.1
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 3.7e-54 216.1 308 45.1
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 4.9e-54 215.7 209 58.4
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 6.4e-54 215.3 308 46.4
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.1e-53 214.5 317 50.8
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 3.2e-53 213.0 317 43.8
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 4.1e-53 212.6 213 54.5
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 9.2e-53 211.5 211 53.6
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 1.6e-52 210.7 257 50.2
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.9e-52 208.8 296 52.0
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 8.6e-51 204.9 316 43.7
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 8.6e-51 204.9 193 64.8
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 1.1e-50 204.5 207 52.7
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.9e-50 203.8 307 47.6
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.9e-50 203.8 253 52.6
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 5.6e-50 202.2 214 51.9
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 7.3e-50 201.8 305 43.3
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 6.2e-49 198.7 212 57.1
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.0e-48 198.0 240 48.3
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 1.0e-48 198.0 204 52.5
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 1.4e-48 197.6 205 58.0
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 4.0e-48 196.1 217 51.6
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 4.4e-47 192.6 296 44.9
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 4.4e-47 192.6 217 51.2
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.8e-47 192.2 212 57.1
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.2e-46 190.3 193 62.7
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.7e-43 180.6 381 36.7
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.0e-43 179.1 202 52.5
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.9e-42 177.2 286 44.4
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.2e-39 167.9 177 57.1
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.9e-38 162.5 294 38.8
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 2.7e-28 130.2 176 43.2
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 6.6e-27 125.6 210 39.0
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.6e-26 122.5 218 41.7
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 9.6e-26 121.7 208 41.8
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.9e-22 110.2 150 50.7
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 2.1e-20 104.0 192 38.5
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.0e-19 100.1 143 49.7
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 5.6e-18 95.9 62 75.8
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.9e-16 89.0 123 52.8
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 1.9e-13 80.9 92 46.7
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.2e-13 80.1 55 70.9
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 3.2e-13 80.1 120 37.5
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.2e-13 79.7 88 45.5
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.6e-12 77.8 206 36.9
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 3.5e-12 76.6 55 63.6
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.1e-09 67.4 103 38.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.6e-09 66.6 130 39.2
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.6e-09 66.6 55 54.5
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 3.6e-09 66.6 42 73.8
Sabra02G0016800 Salix brachista HOM05D006975 ORTHO05D008736 4.9e-06 56.2 72 52.8


User provided reference genes

Program Settings