Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027472.1 Olea europaea HOM05D004252 ORTHO05D005101 7.0e-237 823.5 414 100.0
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 8.8e-171 604.0 361 82.3
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 1.4e-168 596.7 361 80.6
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 3.1e-168 595.5 361 80.6
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 4.1e-168 595.1 361 81.7
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 6.9e-168 594.3 360 81.4
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 2.6e-167 592.4 361 81.2
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 2.6e-167 592.4 361 80.3
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 1.3e-166 590.1 360 80.6
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 2.2e-166 589.3 361 80.6
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 3.8e-166 588.6 361 79.8
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 6.5e-166 587.8 361 80.9
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 8.5e-166 587.4 361 79.2
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 2.7e-164 582.4 362 79.0
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 6.1e-164 581.3 361 80.9
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.4e-163 580.1 361 78.9
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 5.1e-163 578.2 361 79.2
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 6.7e-163 577.8 367 77.9
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 6.7e-163 577.8 361 77.3
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 2.0e-162 576.2 361 77.6
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 2.6e-162 575.9 386 74.4
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 4.4e-162 575.1 361 77.8
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 1.3e-161 573.5 361 78.4
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 1.1e-160 570.5 361 78.7
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 1.4e-160 570.1 361 77.6
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 3.1e-160 568.9 361 76.2
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 5.3e-160 568.2 361 76.7
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 7.0e-160 567.8 364 74.5
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 9.1e-160 567.4 358 79.1
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 1.2e-159 567.0 361 76.7
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.2e-159 567.0 361 76.7
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 1.6e-159 566.6 361 78.1
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 2.0e-159 566.2 361 78.1
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 2.0e-159 566.2 361 78.9
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 1.0e-158 563.9 361 76.7
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 2.2e-158 562.8 361 77.6
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 3.8e-158 562.0 361 75.6
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 5.0e-158 561.6 361 77.0
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 5.0e-158 561.6 361 77.8
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 1.1e-157 560.5 361 76.7
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 1.9e-157 559.7 361 76.2
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 1.2e-156 557.0 349 77.7
Cpa.g.c42029 Carica papaya HOM05D004252 ORTHO05D005101 1.2e-156 557.0 361 76.7
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.2e-156 557.0 360 74.4
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 1.6e-156 556.6 364 73.6
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 2.1e-156 556.2 361 75.9
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 2.7e-156 555.8 361 75.9
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 3.6e-156 555.4 361 75.9
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 3.6e-156 555.4 361 76.5
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 6.1e-156 554.7 361 74.0
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.0e-155 553.9 368 75.0
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 5.2e-155 551.6 361 76.7
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.1e-154 550.4 361 73.4
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 1.1e-154 550.4 361 75.9
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 2.6e-154 549.3 349 77.7
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 3.3e-154 548.9 361 73.1
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 4.4e-154 548.5 361 75.9
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 9.7e-154 547.4 358 75.7
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 9.7e-154 547.4 361 75.6
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 8.2e-153 544.3 358 74.0
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 1.1e-152 543.9 361 73.7
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 1.4e-152 543.5 373 73.7
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 1.8e-152 543.1 361 74.2
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 1.8e-152 543.1 361 74.8
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 3.1e-152 542.3 363 74.9
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 5.3e-152 541.6 358 73.7
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 7.0e-152 541.2 358 74.3
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 7.0e-152 541.2 362 75.1
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 9.1e-152 540.8 364 74.2
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 1.6e-151 540.0 365 73.2
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 3.5e-151 538.9 372 71.8
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 3.5e-151 538.9 358 73.5
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 7.7e-151 537.7 358 73.7
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 1.0e-150 537.3 359 74.9
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 1.7e-150 536.6 358 73.2
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 2.9e-150 535.8 358 73.2
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 1.5e-149 533.5 358 73.2
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 4.2e-149 531.9 361 73.7
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 1.2e-148 530.4 358 72.9
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 1.2e-148 530.4 361 73.4
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 1.2e-148 530.4 330 77.6
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.6e-148 530.0 360 71.4
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.6e-148 530.0 360 71.4
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 1.6e-148 530.0 348 77.3
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 2.7e-148 529.3 358 70.9
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 8.0e-148 527.7 363 73.3
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 2.3e-147 526.2 358 72.3
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 9.1e-144 514.2 354 72.6
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 1.3e-142 510.4 349 72.2
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.7e-142 510.0 358 71.2
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.9e-141 506.5 349 72.8
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 5.5e-141 505.0 354 70.6
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 5.5e-141 505.0 359 68.8
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 7.2e-141 504.6 354 70.6
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 9.4e-141 504.2 361 70.1
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 2.1e-140 503.1 359 68.8
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 6.8e-139 498.0 349 70.5
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 4.4e-138 495.4 354 69.5
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.4e-136 490.3 330 74.5
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 3.1e-136 489.2 350 70.3
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 5.4e-136 488.4 350 70.6
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 5.4e-136 488.4 350 70.6
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 1.6e-135 486.9 361 66.2
arahy.Tifrunner.gnm1.ann1.8T8W7S Arachis hypogaea HOM05D004252 ORTHO05D005101 2.7e-135 486.1 327 73.1
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 3.5e-135 485.7 349 69.9
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 2.8e-132 476.1 349 65.6
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 3.6e-132 475.7 365 65.2
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 8.3e-129 464.5 360 65.0
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 3.2e-128 462.6 349 64.8
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 3.2e-128 462.6 358 64.5
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 3.0e-126 456.1 338 69.2
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 8.0e-124 448.0 349 61.9
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 3.1e-123 446.0 348 62.1
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 2.5e-117 426.4 362 60.8
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 1.0e-110 404.4 358 57.0
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 8.9e-99 364.8 357 53.8
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 3.4e-98 362.8 397 49.6
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.3e-94 350.9 360 48.9
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.6e-92 344.0 377 46.2
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 4.0e-38 163.3 90 87.8
SEGI_18631 Sequoiadendron giganteum HOM05D000173 ORTHO05D006747 4.7e-23 113.2 118 53.4
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 7.5e-21 105.9 54 92.6
SEGI_17147 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 1.8e-14 84.7 66 66.7
arahy.Tifrunner.gnm1.ann1.82F4VT Arachis hypogaea HOM05D004252 ORTHO05D005101 9.2e-11 72.4 61 63.9
PRCOL_00001722 Prasinoderma coloniale HOM05D000936 ORTHO05D005107 4.6e-10 70.1 448 22.8
MCO11G870 Micromonas commoda HOM05D004252 ORTHO05D005101 1.3e-09 68.6 131 29.8


User provided reference genes

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