Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 3.1e-128 461.8 236 100.0
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 4.2e-85 318.5 239 69.5
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 2.7e-84 315.8 239 67.8
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 4.6e-84 315.1 236 69.1
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 1.0e-83 313.9 239 68.2
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.0e-83 313.9 239 68.2
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 1.3e-83 313.5 239 68.2
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 1.8e-83 313.2 239 68.2
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 5.1e-83 311.6 239 67.4
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 8.7e-83 310.8 239 67.4
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 8.7e-83 310.8 239 66.9
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 2.5e-82 309.3 239 67.8
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 1.6e-81 306.6 239 66.1
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.2e-81 306.2 242 66.9
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 3.7e-81 305.4 236 65.7
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 8.2e-81 304.3 239 64.9
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 1.1e-80 303.9 239 65.3
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.8e-80 303.1 239 65.7
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 4.1e-80 302.0 239 65.3
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 5.3e-80 301.6 239 64.9
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 9.0e-80 300.8 239 64.9
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.0e-80 300.8 239 64.4
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 9.0e-80 300.8 239 65.3
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 2.0e-79 299.7 239 66.1
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.0e-79 299.7 239 64.4
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.0e-79 299.7 239 64.4
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.6e-79 299.3 246 64.2
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 3.4e-79 298.9 259 62.2
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 3.4e-79 298.9 239 64.4
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 4.5e-79 298.5 239 64.4
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 5.9e-79 298.1 239 62.8
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 1.0e-78 297.4 239 64.0
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 1.3e-78 297.0 239 62.3
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 1.3e-78 297.0 239 65.7
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.7e-78 296.6 239 63.6
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 1.7e-78 296.6 239 63.6
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 2.9e-78 295.8 239 63.2
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 2.9e-78 295.8 240 65.8
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 5.0e-78 295.0 239 62.8
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 5.0e-78 295.0 240 64.6
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 5.0e-78 295.0 238 62.6
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 8.5e-78 294.3 239 63.6
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 8.5e-78 294.3 239 64.0
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 8.5e-78 294.3 239 62.3
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.1e-77 293.9 239 62.3
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 1.4e-77 293.5 239 61.9
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 1.4e-77 293.5 239 61.9
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.9e-77 293.1 236 64.8
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 3.2e-77 292.4 239 65.7
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 5.5e-77 291.6 239 62.3
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 9.4e-77 290.8 239 64.0
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.2e-76 290.4 239 63.2
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.2e-76 290.4 226 65.0
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 1.6e-76 290.0 238 63.0
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 2.1e-76 289.7 240 63.8
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 6.1e-76 288.1 250 59.6
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 6.1e-76 288.1 240 62.5
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 1.4e-75 287.0 239 60.7
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.8e-75 286.6 240 61.2
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 5.1e-75 285.0 240 60.8
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 6.7e-75 284.6 239 61.9
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 6.7e-75 284.6 239 61.5
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 6.7e-75 284.6 239 61.1
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 8.8e-75 284.3 239 61.5
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 1.1e-74 283.9 239 60.7
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 1.5e-74 283.5 239 60.7
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.5e-74 283.5 239 61.5
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 2.5e-74 282.7 239 62.3
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 2.5e-74 282.7 239 60.3
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 5.7e-74 281.6 240 60.0
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 7.4e-74 281.2 241 63.1
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 7.4e-74 281.2 236 63.1
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 9.7e-74 280.8 240 59.2
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 9.7e-74 280.8 236 63.1
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 1.3e-73 280.4 240 63.8
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.2e-73 279.6 241 62.2
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 2.8e-73 279.3 240 62.1
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.8e-73 279.3 241 62.2
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.7e-73 278.9 241 62.2
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 3.7e-73 278.9 237 62.4
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 4.8e-73 278.5 241 60.2
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 4.8e-73 278.5 240 62.1
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.4e-72 276.9 241 61.8
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 1.4e-72 276.9 239 58.6
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.4e-72 276.9 239 60.7
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 1.8e-72 276.6 240 62.5
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 1.8e-72 276.6 239 58.6
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 4.1e-72 275.4 235 60.4
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 4.1e-72 275.4 239 57.7
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 5.3e-72 275.0 240 61.7
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 5.3e-72 275.0 236 60.6
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 5.3e-72 275.0 243 58.8
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.0e-71 273.1 233 62.2
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 2.6e-71 272.7 237 61.2
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 4.5e-71 271.9 267 55.4
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 1.0e-70 270.8 240 60.4
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.9e-70 269.2 240 60.4
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 3.8e-70 268.9 237 59.9
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 3.8e-70 268.9 239 56.9
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.1e-69 267.3 240 59.6
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.9e-69 266.5 241 60.2
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 2.5e-69 266.2 243 60.9
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.5e-69 266.2 240 60.0
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.5e-69 266.2 241 60.6
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.2e-69 265.8 248 59.7
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 4.2e-69 265.4 243 57.2
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 4.2e-69 265.4 239 56.1
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 7.2e-69 264.6 240 60.0
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 7.2e-69 264.6 239 58.2
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 7.9e-68 261.2 239 58.2
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 1.0e-67 260.8 281 53.0
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 1.8e-67 260.0 243 59.7
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.8e-67 260.0 239 58.6
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 3.0e-67 259.2 298 49.7
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 3.0e-67 259.2 237 59.5
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 3.0e-67 259.2 243 59.3
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 3.0e-67 259.2 237 59.5
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 3.9e-67 258.8 243 59.3
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 3.9e-67 258.8 243 59.7
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 3.9e-67 258.8 243 59.3
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 1.1e-66 257.3 243 59.3
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 4.4e-66 255.4 237 59.9
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 9.7e-66 254.2 239 55.6
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 9.7e-66 254.2 239 55.6
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.8e-65 252.7 243 55.6
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 3.1e-64 249.2 205 62.4
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 9.1e-64 247.7 236 58.1
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.2e-63 247.3 238 53.8
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.5e-63 246.9 232 59.1
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 5.9e-63 245.0 212 58.0
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 1.7e-62 243.4 240 52.9
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 6.5e-62 241.5 239 56.1
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.9e-61 240.0 239 54.4
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 1.6e-60 236.9 241 55.6
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.4e-59 233.8 263 50.2
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 2.0e-58 229.9 242 55.8
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 2.0e-58 229.9 239 53.6
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 3.3e-58 229.2 207 58.9
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 5.3e-56 221.9 239 53.6
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 1.2e-55 220.7 128 87.5
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 4.5e-55 218.8 223 52.9
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 1.6e-52 210.3 128 78.9
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.3e-51 206.5 180 61.7
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 1.3e-49 200.7 239 45.2
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 1.8e-48 196.8 298 42.3
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 2.9e-46 189.5 128 68.8
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 3.8e-46 189.1 132 66.7
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 1.2e-44 184.1 240 42.9
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.0e-39 166.8 213 50.2
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 4.0e-35 152.5 128 57.0
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 8.9e-35 151.4 128 60.2
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.0e-30 135.6 253 39.5
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 6.8e-27 125.2 212 39.6
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 9.8e-26 121.3 137 44.5
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 8.3e-25 118.2 131 45.8
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.4e-24 117.5 284 35.6
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.2e-23 114.4 264 36.7
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.5e-23 112.8 66 86.4
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.7e-22 110.5 133 45.9
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.1e-21 107.8 130 45.4
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 2.5e-21 106.7 65 81.5
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 7.1e-16 88.6 128 42.2
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.2e-15 87.8 102 48.0
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 6.0e-15 85.5 225 34.7
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 8.6e-14 81.6 47 87.2
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 3.3e-13 79.7 64 59.4
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 1.8e-11 73.9 201 29.4
Oeu056757.1 Olea europaea HOM05D006194 ORTHO05D005076 1.8e-11 73.9 40 87.5
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.7e-06 57.4 38 73.7


User provided reference genes

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