Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026545.1 Olea europaea HOM05D003779 ORTHO05D002678 6.5e-76 287.3 149 100.0
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 3.3e-43 178.7 145 63.4
Dinv41398 Davidia involucrata HOM05D003779 ORTHO05D002678 6.8e-41 171.0 148 64.9
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 2.0e-40 169.5 145 60.7
Actinidia04285 Actinidia chinensis HOM05D003779 ORTHO05D002678 1.3e-39 166.8 148 62.2
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 1.7e-39 166.4 145 60.7
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 1.7e-39 166.4 145 60.0
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 4.9e-39 164.9 145 59.3
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 1.1e-38 163.7 145 59.3
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 1.1e-38 163.7 143 63.6
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 2.4e-38 162.5 149 62.4
CSS0012306 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 7.1e-38 161.0 149 62.4
Thecc.09G033700 Theobroma cacao HOM05D003779 ORTHO05D002678 2.7e-37 159.1 148 60.1
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 3.9e-36 155.2 148 61.5
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 5.1e-36 154.8 154 59.7
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 6.6e-36 154.5 144 63.2
Cfa020847 Carpinus fangiana HOM05D003779 ORTHO05D002678 8.6e-36 154.1 148 59.5
Actinidia38340 Actinidia chinensis HOM05D003779 ORTHO05D007251 1.9e-35 152.9 143 60.1
CSS0041477 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 2.5e-35 152.5 149 62.4
QL02p092676 Quercus lobata HOM05D003779 ORTHO05D002678 4.3e-35 151.8 149 61.1
Manes.14G111700 Manihot esculenta HOM05D003779 ORTHO05D002678 7.3e-35 151.0 147 59.2
Haze_19235 Corylus avellana HOM05D003779 ORTHO05D002678 2.1e-34 149.4 148 57.4
Gohir.D07G030200 Gossypium hirsutum HOM05D003779 ORTHO05D002678 4.7e-34 148.3 145 59.3
Gorai.001G031400 Gossypium raimondii HOM05D003779 ORTHO05D002678 4.7e-34 148.3 145 59.3
Duzib168G2294 Durio zibethinus HOM05D003779 ORTHO05D002678 1.4e-33 146.7 148 58.1
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 2.4e-33 146.0 145 62.8
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 3.1e-33 145.6 155 56.1
Ciclev10007258m.g Citrus clementina HOM05D003779 ORTHO05D002678 4.0e-33 145.2 148 58.8
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 4.0e-33 145.2 148 58.1
Ca_14533_v3 Cicer arietinum L. HOM05D003779 ORTHO05D002678 5.2e-33 144.8 147 58.5
Gohir.A07G026300 Gossypium hirsutum HOM05D003779 ORTHO05D002678 5.2e-33 144.8 145 57.9
Phvul.009G194000 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 5.2e-33 144.8 149 58.4
Glyma.09G097600 Glycine max HOM05D003779 ORTHO05D002678 1.2e-32 143.7 148 57.4
TPR.G35880 Trifolium pratense HOM05D003779 ORTHO05D002678 1.2e-32 143.7 147 55.1
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 2.0e-32 142.9 148 59.5
AUR62039744 Chenopodium quinoa HOM05D003779 ORTHO05D002678 2.6e-32 142.5 147 53.1
Atru.chr7.134 Acer truncatum HOM05D003779 ORTHO05D002678 3.4e-32 142.1 152 60.5
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 3.4e-32 142.1 146 58.2
HanXRQChr12g0357201 Helianthus annuus HOM05D003779 ORTHO05D002678 5.8e-32 141.4 143 57.3
Glyma.15G205600 Glycine max HOM05D003779 ORTHO05D002678 7.6e-32 141.0 148 56.8
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 1.7e-31 139.8 147 56.5
MELO3C010242.2 Cucumis melo HOM05D003779 ORTHO05D002678 1.7e-31 139.8 145 57.9
Lj9C714G7 Lonicera japonica HOM05D003779 ORTHO05D002678 2.2e-31 139.4 151 55.0
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 2.2e-31 139.4 149 56.4
Medtr2g450210 Medicago truncatula HOM05D003779 ORTHO05D002678 2.9e-31 139.0 147 55.1
Manes.06G037900 Manihot esculenta HOM05D003779 ORTHO05D002678 1.4e-30 136.7 147 57.1
ClCG06G012240 Citrullus lanatus HOM05D003779 ORTHO05D002678 3.2e-30 135.6 146 57.5
COL.COLO4_18776 Corchorus olitorius HOM05D003779 ORTHO05D002678 3.2e-30 135.6 146 54.1
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 3.2e-30 135.6 146 56.2
CsaV3_1G028740 Cucumis sativus L. HOM05D003779 ORTHO05D002678 4.1e-30 135.2 144 57.6
EL10Ac8g18849 Beta vulgaris HOM05D003779 ORTHO05D002678 7.1e-30 134.4 148 54.7
MD02G1009900 Malus domestica HOM05D003779 ORTHO05D002678 9.2e-30 134.0 177 50.8
PGR102G2779 Punica granatum HOM05D003779 ORTHO05D002678 9.2e-30 134.0 151 55.0
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 1.2e-29 133.7 155 52.9
HanXRQChr10g0314671 Helianthus annuus HOM05D003779 ORTHO05D002678 1.6e-29 133.3 145 55.9
VMungo1309G0106 Vigna mungo HOM05D003779 ORTHO05D002678 1.6e-29 133.3 149 55.0
ECA234G1613 Erigeron canadensis HOM05D003779 ORTHO05D002678 2.1e-29 132.9 146 57.5
FAN26G3236 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.1e-29 132.9 154 56.5
FvH4_1g01180 Fragaria vesca HOM05D003779 ORTHO05D002678 3.5e-29 132.1 153 56.9
Sabra18G0093100 Salix brachista HOM05D003779 ORTHO05D002678 3.5e-29 132.1 161 50.3
FAN19G1766 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.6e-29 131.7 152 56.6
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 4.6e-29 131.7 155 51.6
PGSC0003DMG400003182 Solanum tuberosum HOM05D003779 ORTHO05D002678 6.0e-29 131.3 117 58.1
Lj6g0022686 Lotus japonicus HOM05D003779 ORTHO05D002678 7.8e-29 131.0 145 56.6
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea HOM05D003779 ORTHO05D002678 1.3e-28 130.2 146 54.1
SGA_v2.0_scaffold387G50508 Striga asiatica HOM05D003779 ORTHO05D002678 1.3e-28 130.2 145 51.7
DCAR_019379 Daucus carota HOM05D003779 ORTHO05D002678 1.7e-28 129.8 149 51.7
FAN28G2365 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.7e-28 129.8 153 55.6
Potri.018G110100 Populus trichocarpa HOM05D003779 ORTHO05D002678 1.7e-28 129.8 157 51.0
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea HOM05D003779 ORTHO05D002678 3.0e-28 129.0 146 53.4
Gorai.013G217400 Gossypium raimondii HOM05D003779 ORTHO05D002678 3.9e-28 128.6 148 54.1
Lalb_Chr13g0300951 Lupinus albus HOM05D003779 ORTHO05D002678 5.1e-28 128.3 149 55.7
CiPaw.15G174200 Carya illinoinensis HOM05D003779 ORTHO05D002678 6.6e-28 127.9 148 53.4
Gohir.A13G184900 Gossypium hirsutum HOM05D003779 ORTHO05D002678 6.6e-28 127.9 148 53.4
Sed0010991 Sechium edule HOM05D003779 ORTHO05D002678 1.1e-27 127.1 149 53.0
Duzib187G1590 Durio zibethinus HOM05D003779 ORTHO05D002678 1.9e-27 126.3 150 52.0
TAR636G1028 Trochodendron aralioides HOM05D003779 ORTHO05D002678 1.9e-27 126.3 162 51.9
Ah.14g078430 Amaranthus hybridus HOM05D003779 ORTHO05D002678 2.5e-27 125.9 144 52.8
TAR625G1002 Trochodendron aralioides HOM05D003779 ORTHO05D002678 4.3e-27 125.2 158 52.5
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 1.6e-26 123.2 151 55.6
AL8G34140 Arabidopsis lyrata HOM05D003779 ORTHO05D002678 4.7e-26 121.7 145 49.0
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 1.1e-25 120.6 155 51.6
AT5G58040 Arabidopsis thaliana HOM05D003779 ORTHO05D002678 3.1e-25 119.0 146 49.3
SalBow1G3877 Salvia bowleyana HOM05D003779 ORTHO05D002678 4.0e-25 118.6 146 52.1
C09p49960 Brassica napus HOM05D003779 ORTHO05D002678 5.2e-25 118.2 151 51.0
BolC9t57849H Brassica oleracea HOM05D003779 ORTHO05D002678 5.2e-25 118.2 151 51.0
Psat1g022120 Pisum sativum HOM05D003779 ORTHO05D002678 5.2e-25 118.2 188 42.6
Aa31LG3G13870 Aethionema arabicum HOM05D003779 ORTHO05D002678 9.0e-25 117.5 145 46.2
Carub.0008s1859 Capsella rubella HOM05D003779 ORTHO05D002678 1.2e-24 117.1 145 47.6
SGA_v2.0_scaffold206G41814 Striga asiatica HOM05D003779 ORTHO05D002678 1.2e-24 117.1 148 50.7
BcaB08g36155 Brassica carinata HOM05D003779 ORTHO05D002678 2.6e-24 115.9 146 47.9
BcaC04g19912 Brassica carinata HOM05D003779 ORTHO05D002678 3.4e-24 115.5 151 50.3
A10p16130 Brassica napus HOM05D003779 ORTHO05D002678 3.4e-24 115.5 151 50.3
BraA10t43616Z Brassica rapa HOM05D003779 ORTHO05D002678 3.4e-24 115.5 151 50.3
CARHR271850 Cardamine hirsuta HOM05D003779 ORTHO05D002678 3.4e-24 115.5 145 46.9
Thhalv10012479m.g Eutrema salsugineum HOM05D003779 ORTHO05D002678 4.4e-24 115.2 145 48.3
Lalb_Chr08g0233951 Lupinus albus HOM05D003779 ORTHO05D002678 7.6e-24 114.4 149 51.7
Lalb_Chr08g0234021 Lupinus albus HOM05D003779 ORTHO05D002678 7.6e-24 114.4 149 51.7
Sp6g19720 Schrenkiella parvula HOM05D003779 ORTHO05D002678 7.6e-24 114.4 149 50.3
Rhsim01G0045400 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.7e-23 113.2 151 52.3
Rhsim01G0036200 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.2e-23 112.8 148 50.7
A03p12430 Brassica napus HOM05D003779 ORTHO05D002678 1.9e-22 109.8 151 46.4
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 2.4e-22 109.4 164 45.7
Lsat_1_v5_gn_5_91481 Lactuca sativa HOM05D003779 ORTHO05D002678 3.2e-22 109.0 147 49.7
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.2e-22 108.6 128 56.2
MBI15_g10629_MAGBIO Magnolia biondii HOM05D003779 ORTHO05D002678 4.2e-22 108.6 150 50.0
Ah.14g078210 Amaranthus hybridus HOM05D003779 ORTHO05D002678 1.2e-21 107.1 142 49.3
Migut.J01330 Erythranthe guttata HOM05D003779 ORTHO05D002678 3.5e-21 105.5 158 48.1
Hma1.2p1_0222F.1_g093310 Hydrangea macrophylla HOM05D003779 ORTHO05D002678 6.0e-21 104.8 85 64.7
Hma1.2p1_2658F.1_g326355 Hydrangea macrophylla HOM05D003779 ORTHO05D002678 6.0e-21 104.8 85 64.7
C03p14630 Brassica napus HOM05D003779 ORTHO05D002678 1.7e-20 103.2 148 45.3
Aqoxy7G03464 Aquilegia oxysepala HOM05D003779 ORTHO05D002678 6.6e-20 101.3 157 44.6
Os03g0725100 Oryza sativa ssp. japonica HOM05D003779 ORTHO05D002678 8.7e-20 100.9 144 43.8
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 1.1e-19 100.5 145 44.1
CDE05G1362 Ceratophyllum demersum HOM05D003779 ORTHO05D002678 1.5e-19 100.1 150 44.0
DCAR_020882 Daucus carota HOM05D003779 ORTHO05D002678 4.3e-19 98.6 137 47.4
unitig_0.g2698 Utricularia gibba HOM05D003779 ORTHO05D002678 4.3e-19 98.6 142 50.0
Zm00001eb055800 Zea mays HOM05D003779 ORTHO05D002678 4.3e-19 98.6 146 42.5
THA.LOC104817824 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 7.3e-19 97.8 146 44.5
Phvul.003G157600 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 1.3e-18 97.1 90 55.6
Zm00001eb215820 Zea mays HOM05D003779 ORTHO05D002678 2.1e-18 96.3 146 43.2
PSO170G5719 Papaver somniferum HOM05D003779 ORTHO05D002678 1.4e-17 93.6 145 48.3
HPP92_020551 Vanilla planifolia HOM05D003779 ORTHO05D002678 9.9e-16 87.4 155 41.9
THA.LOC104813541 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 1.3e-15 87.0 156 41.0
SHI02627 Sapria himalayana HOM05D003779 ORTHO05D002678 4.9e-15 85.1 144 41.0
BcaC09g49900 Brassica carinata HOM05D003779 ORTHO05D002678 6.4e-15 84.7 126 46.8
PSO017G3118 Papaver somniferum HOM05D003779 ORTHO05D002678 8.4e-15 84.3 146 45.9
VMungo1215G0704 Vigna mungo HOM05D003779 ORTHO05D002678 2.7e-13 79.3 144 43.8
BcaB01g04473 Brassica carinata HOM05D003779 ORTHO05D002678 1.8e-12 76.6 126 44.4
ATR0739G197 Amborella trichopoda HOM05D003779 ORTHO05D002678 6.7e-12 74.7 155 39.4
HPP92_020618 Vanilla planifolia HOM05D003779 ORTHO05D002678 7.6e-08 61.2 66 57.6


User provided reference genes

Program Settings