Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026538.1 Olea europaea HOM05D003779 ORTHO05D002678 8.7e-222 773.5 432 100.0
Oeu026546.1 Olea europaea HOM05D003779 ORTHO05D002678 4.7e-26 123.2 91 76.9
Oeu050477.1 Olea europaea HOM05D003779 ORTHO05D002678 4.9e-23 113.2 91 74.7
CSS0008137 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.3e-20 105.1 246 37.4
Dinv42884 Davidia involucrata HOM05D003779 ORTHO05D002678 5.1e-20 103.2 246 36.2
Dinv43216 Davidia involucrata HOM05D003779 ORTHO05D002678 5.1e-20 103.2 246 36.2
Peaxi162Scf00347g00821 Petunia axillaris HOM05D003779 ORTHO05D002678 6.6e-20 102.8 236 37.3
SGA_v2.0_scaffold206G41814 Striga asiatica HOM05D003779 ORTHO05D002678 5.6e-19 99.8 249 36.1
CiPaw.15G174200 Carya illinoinensis HOM05D003779 ORTHO05D002678 4.0e-17 93.6 234 33.8
Nitab4.5_0001201g0070 Nicotiana tabacum HOM05D003779 ORTHO05D002678 5.2e-17 93.2 93 64.5
Actinidia23546 Actinidia chinensis HOM05D003779 ORTHO05D002678 1.2e-16 92.0 233 35.6
Sopen07g001470 Solanum pennellii HOM05D003779 ORTHO05D002678 1.2e-16 92.0 92 63.0
CSS0005827 Camellia sinensis var. sinensis HOM05D003779 ORTHO05D002678 1.5e-16 91.7 100 60.0
Prupe.7G260100 Prunus persica HOM05D003779 ORTHO05D002678 2.0e-16 91.3 234 33.3
CAN.G1116.7 Capsicum annuum HOM05D003779 ORTHO05D002678 3.4e-16 90.5 92 62.0
GSVIVG01023597001 Vitis vinifera HOM05D003779 ORTHO05D002678 9.9e-16 89.0 231 32.5
Ciclev10007258m.g Citrus clementina HOM05D003779 ORTHO05D002678 1.7e-15 88.2 260 33.1
Nitab4.5_0008534g0010 Nicotiana tabacum HOM05D003779 ORTHO05D002678 2.9e-15 87.4 96 58.3
Migut.J01330 Erythranthe guttata HOM05D003779 ORTHO05D002678 3.8e-15 87.0 242 32.6
Solyc07g005320.3 Solanum lycopersicum HOM05D003779 ORTHO05D002678 6.4e-15 86.3 92 59.8
vmacro06092 Vaccinium macrocarpon HOM05D003779 ORTHO05D002678 6.4e-15 86.3 92 58.7
Dinv41398 Davidia involucrata HOM05D003779 ORTHO05D002678 1.9e-14 84.7 248 33.5
CiPaw.16G114900 Carya illinoinensis HOM05D003779 ORTHO05D002678 3.2e-14 84.0 77 61.0
SGA_v2.0_scaffold387G50508 Striga asiatica HOM05D003779 ORTHO05D002678 5.4e-14 83.2 296 30.1
TAR625G1002 Trochodendron aralioides HOM05D003779 ORTHO05D002678 5.4e-14 83.2 235 32.3
QL02p092676 Quercus lobata HOM05D003779 ORTHO05D002678 7.1e-14 82.8 98 54.1
Lj9C714G7 Lonicera japonica HOM05D003779 ORTHO05D002678 1.6e-13 81.6 241 32.0
Atru.chr7.134 Acer truncatum HOM05D003779 ORTHO05D002678 2.1e-13 81.3 104 51.9
Cpa.g.sc46.127 Carica papaya HOM05D003779 ORTHO05D002678 6.0e-13 79.7 100 54.0
CANSAT11G0231 Cannabis sativa HOM05D003779 ORTHO05D002678 7.8e-13 79.3 243 31.3
Haze_19235 Corylus avellana HOM05D003779 ORTHO05D002678 7.8e-13 79.3 82 57.3
TWI34G0110 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 7.8e-13 79.3 216 33.8
MD02G1009900 Malus domestica HOM05D003779 ORTHO05D002678 1.0e-12 79.0 77 61.0
SalBow1G6151 Salvia bowleyana HOM05D003779 ORTHO05D002678 1.3e-12 78.6 76 67.1
Cfa020847 Carpinus fangiana HOM05D003779 ORTHO05D002678 1.7e-12 78.2 82 56.1
Manes.14G111700 Manihot esculenta HOM05D003779 ORTHO05D002678 1.7e-12 78.2 78 59.0
RcHm_v2.0_Chr2g0085981 Rosa chinensis HOM05D003779 ORTHO05D002678 1.7e-12 78.2 234 29.5
VMungo1215G0704 Vigna mungo HOM05D003779 ORTHO05D002678 1.7e-12 78.2 102 49.0
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.3e-12 77.8 92 54.3
TAR636G1028 Trochodendron aralioides HOM05D003779 ORTHO05D002678 5.1e-12 76.6 227 31.7
Phvul.003G157600 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 8.7e-12 75.9 98 51.0
TWI63G1714 Tripterygium wilfordii HOM05D003779 ORTHO05D002678 1.1e-11 75.5 99 48.5
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.5e-11 75.1 77 53.2
MBI15_g10629_MAGBIO Magnolia biondii HOM05D003779 ORTHO05D002678 1.5e-11 75.1 80 58.8
Oeu026547.1 Olea europaea HOM05D003779 ORTHO05D002678 1.9e-11 74.7 58 65.5
TPR.G35880 Trifolium pratense HOM05D003779 ORTHO05D002678 1.9e-11 74.7 115 43.5
Ca_14533_v3 Cicer arietinum L. HOM05D003779 ORTHO05D002678 2.5e-11 74.3 84 53.6
FAN19G1766 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.5e-11 74.3 77 53.2
FAN28G2365 Fragaria x ananassa HOM05D003779 ORTHO05D002678 2.5e-11 74.3 77 53.2
Gohir.A07G026300 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.5e-11 74.3 77 59.7
Gohir.D07G030200 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.5e-11 74.3 77 59.7
Eucgr.C00363 Eucalyptus grandis HOM05D003779 ORTHO05D002678 4.3e-11 73.6 113 51.3
EL10Ac8g18849 Beta vulgaris HOM05D003779 ORTHO05D002678 7.3e-11 72.8 77 57.1
Glyma.09G097600 Glycine max HOM05D003779 ORTHO05D002678 7.3e-11 72.8 88 52.3
Lj6g0022686 Lotus japonicus HOM05D003779 ORTHO05D002678 7.3e-11 72.8 87 52.9
MELO3C010242.2 Cucumis melo HOM05D003779 ORTHO05D002678 9.6e-11 72.4 123 42.3
Gorai.001G031400 Gossypium raimondii HOM05D003779 ORTHO05D002678 9.6e-11 72.4 77 58.4
Psat1g022120 Pisum sativum HOM05D003779 ORTHO05D002678 9.6e-11 72.4 86 51.2
FAN26G3236 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.3e-10 72.0 75 52.0
Glyma.15G205600 Glycine max HOM05D003779 ORTHO05D002678 1.3e-10 72.0 88 53.4
Phvul.009G194000 Phaseolus vulgaris HOM05D003779 ORTHO05D002678 1.3e-10 72.0 85 54.1
Thecc.09G033700 Theobroma cacao HOM05D003779 ORTHO05D002678 1.3e-10 72.0 77 55.8
Actinidia04285 Actinidia chinensis HOM05D003779 ORTHO05D002678 1.6e-10 71.6 99 50.5
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea HOM05D003779 ORTHO05D002678 1.6e-10 71.6 84 53.6
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea HOM05D003779 ORTHO05D002678 1.6e-10 71.6 84 53.6
ClCG06G012240 Citrullus lanatus HOM05D003779 ORTHO05D002678 1.6e-10 71.6 74 56.8
COL.COLO4_18776 Corchorus olitorius HOM05D003779 ORTHO05D002678 1.6e-10 71.6 77 57.1
SalBow1G3877 Salvia bowleyana HOM05D003779 ORTHO05D002678 1.6e-10 71.6 94 54.3
VMungo1309G0106 Vigna mungo HOM05D003779 ORTHO05D002678 1.6e-10 71.6 86 54.7
CsaV3_1G028740 Cucumis sativus L. HOM05D003779 ORTHO05D002678 2.1e-10 71.2 77 58.4
DCAR_019379 Daucus carota HOM05D003779 ORTHO05D002678 2.1e-10 71.2 97 49.5
FvH4_1g01180 Fragaria vesca HOM05D003779 ORTHO05D002678 2.1e-10 71.2 100 45.0
HanXRQChr10g0314671 Helianthus annuus HOM05D003779 ORTHO05D002678 2.8e-10 70.9 118 45.8
Duzib168G2294 Durio zibethinus HOM05D003779 ORTHO05D002678 3.6e-10 70.5 77 55.8
Lalb_Chr13g0300951 Lupinus albus HOM05D003779 ORTHO05D002678 3.6e-10 70.5 107 49.5
Sed0025790 Sechium edule HOM05D003779 ORTHO05D002678 4.8e-10 70.1 76 55.3
Manes.06G037900 Manihot esculenta HOM05D003779 ORTHO05D002678 6.2e-10 69.7 122 41.8
Medtr2g450210 Medicago truncatula HOM05D003779 ORTHO05D002678 6.2e-10 69.7 101 45.5
PGR102G2779 Punica granatum HOM05D003779 ORTHO05D002678 6.2e-10 69.7 85 50.6
Sc08g0004970 Simmondsia chinensis HOM05D003779 ORTHO05D002678 8.1e-10 69.3 99 47.5
AT5G58040 Arabidopsis thaliana HOM05D003779 ORTHO05D002678 1.1e-09 68.9 85 52.9
Carub.0008s1859 Capsella rubella HOM05D003779 ORTHO05D002678 1.1e-09 68.9 85 52.9
Nn8g39802 Nelumbo nucifera HOM05D003779 ORTHO05D002678 1.1e-09 68.9 250 28.4
AL8G34140 Arabidopsis lyrata HOM05D003779 ORTHO05D002678 1.4e-09 68.6 105 47.6
AUR62039744 Chenopodium quinoa HOM05D003779 ORTHO05D002678 1.4e-09 68.6 94 44.7
AUR62043250 Chenopodium quinoa HOM05D003779 ORTHO05D002678 1.4e-09 68.6 95 48.4
Gohir.A05G051500 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.4e-09 68.6 108 48.1
Gohir.D05G053000 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.8e-09 68.2 108 49.1
Gohir.D13G191400 Gossypium hirsutum HOM05D003779 ORTHO05D002678 1.8e-09 68.2 76 52.6
Gorai.009G054800 Gossypium raimondii HOM05D003779 ORTHO05D002678 1.8e-09 68.2 108 49.1
Sp6g19720 Schrenkiella parvula HOM05D003779 ORTHO05D002678 1.8e-09 68.2 85 51.8
Gohir.A13G184900 Gossypium hirsutum HOM05D003779 ORTHO05D002678 2.4e-09 67.8 76 52.6
Duzib187G1590 Durio zibethinus HOM05D003779 ORTHO05D002678 3.1e-09 67.4 99 47.5
THA.LOC104817824 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 3.1e-09 67.4 96 46.9
Gorai.013G217400 Gossypium raimondii HOM05D003779 ORTHO05D002678 5.3e-09 66.6 76 52.6
THA.LOC104813541 Tarenaya hassleriana HOM05D003779 ORTHO05D002678 5.3e-09 66.6 91 49.5
Rhsim01G0045400 Rhododendron simsii HOM05D003779 ORTHO05D002678 6.9e-09 66.2 81 51.9
Potri.018G110100 Populus trichocarpa HOM05D003779 ORTHO05D002678 9.0e-09 65.9 77 49.4
Sed0010991 Sechium edule HOM05D003779 ORTHO05D002678 1.2e-08 65.5 76 53.9
A10p16130 Brassica napus HOM05D003779 ORTHO05D002678 1.5e-08 65.1 92 48.9
BraA10t43616Z Brassica rapa HOM05D003779 ORTHO05D002678 1.5e-08 65.1 92 48.9
CARHR271850 Cardamine hirsuta HOM05D003779 ORTHO05D002678 1.5e-08 65.1 85 49.4
Rhsim01G0036200 Rhododendron simsii HOM05D003779 ORTHO05D002678 1.5e-08 65.1 69 53.6
DCAR_020882 Daucus carota HOM05D003779 ORTHO05D002678 2.0e-08 64.7 103 44.7
Thhalv10012479m.g Eutrema salsugineum HOM05D003779 ORTHO05D002678 2.6e-08 64.3 110 43.6
ATR0739G197 Amborella trichopoda HOM05D003779 ORTHO05D002678 4.4e-08 63.5 101 45.5
CDE05G1362 Ceratophyllum demersum HOM05D003779 ORTHO05D002678 4.4e-08 63.5 89 47.2
HanXRQChr12g0357201 Helianthus annuus HOM05D003779 ORTHO05D002678 4.4e-08 63.5 76 55.3
BcaC04g19912 Brassica carinata HOM05D003779 ORTHO05D002678 5.8e-08 63.2 92 47.8
C09p49960 Brassica napus HOM05D003779 ORTHO05D002678 7.6e-08 62.8 92 47.8
BolC9t57849H Brassica oleracea HOM05D003779 ORTHO05D002678 7.6e-08 62.8 92 47.8
Sabra06G0142300 Salix brachista HOM05D003779 ORTHO05D002678 7.6e-08 62.8 75 52.0
Sabra06G0143300 Salix brachista HOM05D003779 ORTHO05D002678 7.6e-08 62.8 75 52.0
ECA234G1613 Erigeron canadensis HOM05D003779 ORTHO05D002678 9.9e-08 62.4 113 43.4
Sabra18G0093100 Salix brachista HOM05D003779 ORTHO05D002678 9.9e-08 62.4 75 50.7
Aqoxy7G03464 Aquilegia oxysepala HOM05D003779 ORTHO05D002678 1.3e-07 62.0 106 42.5
Lalb_Chr08g0234021 Lupinus albus HOM05D003779 ORTHO05D002678 2.2e-07 61.2 102 45.1
Aa31LG3G13870 Aethionema arabicum HOM05D003779 ORTHO05D002678 2.9e-07 60.8 101 45.5
BcaB01g04473 Brassica carinata HOM05D003779 ORTHO05D002678 4.9e-07 60.1 84 51.2
BcaB08g36155 Brassica carinata HOM05D003779 ORTHO05D002678 4.9e-07 60.1 92 45.7
unitig_0.g2698 Utricularia gibba HOM05D003779 ORTHO05D002678 4.9e-07 60.1 257 26.8
Dinv17810 Davidia involucrata HOM05D003779 ORTHO05D002678 8.4e-07 59.3 88 45.5
Lsat_1_v5_gn_5_91481 Lactuca sativa HOM05D003779 ORTHO05D002678 1.4e-06 58.5 62 59.7
Ah.14g078430 Amaranthus hybridus HOM05D003779 ORTHO05D002678 5.4e-06 56.6 100 39.0
Potri.006G187400 Populus trichocarpa HOM05D003779 ORTHO05D002678 5.4e-06 56.6 77 49.4
C03p14630 Brassica napus HOM05D003779 ORTHO05D002678 9.3e-06 55.8 102 45.1
BolC3t13903H Brassica oleracea HOM05D003779 ORTHO05D002678 9.3e-06 55.8 102 45.1


User provided reference genes

Program Settings