Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026314.1 Olea europaea HOM05D001780 ORTHO05D005322 1.2e-126 456.4 225 100.0
Migut.G00161 Erythranthe guttata HOM05D001780 ORTHO05D005322 4.3e-71 271.9 175 77.1
SGA_v2.0_scaffold67G22635 Striga asiatica HOM05D001780 ORTHO05D005322 7.3e-71 271.2 188 71.8
Rhsim04G0222400 Rhododendron simsii HOM05D001780 ORTHO05D005322 1.1e-69 267.3 175 76.0
Dinv29743 Davidia involucrata HOM05D001780 ORTHO05D005322 2.0e-68 263.1 175 74.3
vmacro08154 Vaccinium macrocarpon HOM05D001780 ORTHO05D005322 7.6e-68 261.2 175 75.4
Lj6A676G60 Lonicera japonica HOM05D001780 ORTHO05D005322 2.2e-67 259.6 175 73.7
Lj6A675T27 Lonicera japonica HOM05D001780 ORTHO05D005322 1.9e-66 256.5 175 73.1
GSVIVG01017762001 Vitis vinifera HOM05D001780 ORTHO05D005322 4.2e-66 255.4 175 73.1
SalBow2G1454 Salvia bowleyana HOM05D001780 ORTHO05D005322 5.4e-66 255.0 175 69.1
Hund03251 Selenicereus undatus HOM05D001780 ORTHO05D005322 5.4e-66 255.0 175 68.0
Cc03_g01900 Coffea canephora HOM05D001780 ORTHO05D005322 1.2e-65 253.8 171 72.5
CSS0032424 Camellia sinensis var. sinensis HOM05D001780 ORTHO05D005322 4.6e-65 251.9 175 72.0
Potri.010G014500 Populus trichocarpa HOM05D001780 ORTHO05D005322 1.5e-63 246.9 175 72.0
CANSAT78G1960 Cannabis sativa HOM05D001780 ORTHO05D005322 1.9e-63 246.5 175 70.3
QL06p008943 Quercus lobata HOM05D001780 ORTHO05D005322 4.3e-63 245.4 175 69.7
Cfa015386 Carpinus fangiana HOM05D001780 ORTHO05D005322 7.3e-63 244.6 175 69.7
EL10Ac9g22594 Beta vulgaris HOM05D001780 ORTHO05D005322 9.6e-63 244.2 168 71.4
TAR362G0169 Trochodendron aralioides HOM05D001780 ORTHO05D005322 1.3e-62 243.8 175 69.7
Gohir.D09G080700 Gossypium hirsutum HOM05D001780 ORTHO05D005322 2.8e-62 242.7 167 70.1
Sabra10G0009300 Salix brachista HOM05D001780 ORTHO05D005322 2.8e-62 242.7 175 70.3
Cpa.g.sc16.173 Carica papaya HOM05D001780 ORTHO05D005322 8.1e-62 241.1 175 65.7
Gorai.006G096300 Gossypium raimondii HOM05D001780 ORTHO05D005322 1.4e-61 240.4 167 69.5
Prupe.1G136500 Prunus persica HOM05D001780 ORTHO05D005322 1.4e-61 240.4 175 68.6
Gohir.A09G080700 Gossypium hirsutum HOM05D001780 ORTHO05D005322 2.4e-61 239.6 167 68.9
MBI19_g29219_MAGBIO Magnolia biondii HOM05D001780 ORTHO05D005322 3.1e-61 239.2 175 66.9
COL.COLO4_34741 Corchorus olitorius HOM05D001780 ORTHO05D005322 4.0e-61 238.8 166 70.5
Peaxi162Scf00048g01820 Petunia axillaris HOM05D001780 ORTHO05D005322 5.3e-61 238.4 175 68.6
AUR62029200 Chenopodium quinoa HOM05D001780 ORTHO05D005322 6.9e-61 238.0 168 69.6
Lalb_Chr15g0083491 Lupinus albus HOM05D001780 ORTHO05D005322 6.9e-61 238.0 175 67.4
HanXRQChr03g0080971 Helianthus annuus HOM05D001780 ORTHO05D005322 1.5e-60 236.9 175 67.4
Psat1g153920 Pisum sativum HOM05D001780 ORTHO05D005322 1.5e-60 236.9 175 67.4
CiPaw.01G148500 Carya illinoinensis HOM05D001780 ORTHO05D005322 2.0e-60 236.5 175 67.4
Nn3g18527 Nelumbo nucifera HOM05D001780 ORTHO05D005322 2.0e-60 236.5 175 68.0
Nitab4.5_0000700g0090 Nicotiana tabacum HOM05D001780 ORTHO05D005322 3.4e-60 235.7 175 68.0
CAN.G185.35 Capsicum annuum HOM05D001780 ORTHO05D005322 4.4e-60 235.3 175 66.9
Duzib160G0626 Durio zibethinus HOM05D001780 ORTHO05D005322 4.4e-60 235.3 167 68.9
Lj6g0027734 Lotus japonicus HOM05D001780 ORTHO05D005322 4.4e-60 235.3 175 65.1
Nitab4.5_0027974g0010 Nicotiana tabacum HOM05D001780 ORTHO05D005322 4.4e-60 235.3 176 68.2
Nitab4.5_0000059g0580 Nicotiana tabacum HOM05D001780 ORTHO05D005322 5.8e-60 235.0 175 68.6
Solyc01g080810.3 Solanum lycopersicum HOM05D001780 ORTHO05D005322 9.9e-60 234.2 175 66.9
Sopen01g030670 Solanum pennellii HOM05D001780 ORTHO05D005322 9.9e-60 234.2 175 66.9
TWI09G1280 Tripterygium wilfordii HOM05D001780 ORTHO05D005322 9.9e-60 234.2 175 66.9
ECA240G0962 Erigeron canadensis HOM05D001780 ORTHO05D005322 1.3e-59 233.8 175 67.4
MD13G1168400 Malus domestica HOM05D001780 ORTHO05D005322 1.3e-59 233.8 175 68.6
Ciclev10004211m.g Citrus clementina HOM05D001780 ORTHO05D005322 1.7e-59 233.4 175 67.4
Sp2g19410 Schrenkiella parvula HOM05D001780 ORTHO05D005322 2.2e-59 233.0 175 64.6
Medtr2g436760 Medicago truncatula HOM05D001780 ORTHO05D005322 2.9e-59 232.6 175 65.7
VMungo1215G2474 Vigna mungo HOM05D001780 ORTHO05D005322 2.9e-59 232.6 175 62.9
Thecc.02G218100 Theobroma cacao HOM05D001780 ORTHO05D005322 3.8e-59 232.3 167 69.5
A02p37850 Brassica napus HOM05D001780 ORTHO05D005322 1.4e-58 230.3 164 66.5
BraA02t08767Z Brassica rapa HOM05D001780 ORTHO05D005322 1.4e-58 230.3 164 66.5
Ca_01936_v3 Cicer arietinum L. HOM05D001780 ORTHO05D005322 1.4e-58 230.3 175 65.7
DCAR_002465 Daucus carota HOM05D001780 ORTHO05D005322 1.4e-58 230.3 195 61.5
PGSC0003DMG400006289 Solanum tuberosum HOM05D001780 ORTHO05D005322 1.4e-58 230.3 175 65.1
BcaB07g34212 Brassica carinata HOM05D001780 ORTHO05D005322 1.9e-58 229.9 175 64.0
A06p38600 Brassica napus HOM05D001780 ORTHO05D005322 1.9e-58 229.9 175 63.4
Phvul.003G105600 Phaseolus vulgaris HOM05D001780 ORTHO05D005322 4.2e-58 228.8 175 63.4
CARHR182680 Cardamine hirsuta HOM05D001780 ORTHO05D005322 5.4e-58 228.4 175 62.9
Glyma.17G026600 Glycine max HOM05D001780 ORTHO05D005322 5.4e-58 228.4 175 62.9
ClCG05G006110 Citrullus lanatus HOM05D001780 ORTHO05D005322 7.1e-58 228.0 169 66.9
Thhalv10003524m.g Eutrema salsugineum HOM05D001780 ORTHO05D005322 7.1e-58 228.0 175 62.9
THA.LOC104818925 Tarenaya hassleriana HOM05D001780 ORTHO05D005322 9.3e-58 227.6 175 65.7
BolC7t44489H Brassica oleracea HOM05D001780 ORTHO05D005322 1.2e-57 227.3 175 62.9
arahy.Tifrunner.gnm1.ann1.I7AL06 Arachis hypogaea HOM05D001780 ORTHO05D005322 1.6e-57 226.9 168 64.9
BraA06t26775Z Brassica rapa HOM05D001780 ORTHO05D005322 1.6e-57 226.9 175 62.9
MD16G1168800 Malus domestica HOM05D001780 ORTHO05D005322 1.6e-57 226.9 175 66.9
C07p39660 Brassica napus HOM05D001780 ORTHO05D005322 2.1e-57 226.5 175 62.9
AT5G49030 Arabidopsis thaliana HOM05D001780 ORTHO05D005322 4.6e-57 225.3 175 62.3
PSO170G3623 Papaver somniferum HOM05D001780 ORTHO05D005322 4.6e-57 225.3 169 66.3
unitig_0.g2594 Utricularia gibba HOM05D001780 ORTHO05D005322 6.0e-57 224.9 167 66.5
Ah.01g003180 Amaranthus hybridus HOM05D001780 ORTHO05D005322 7.9e-57 224.6 168 69.6
Aqoxy2G02980_Aqoxy2G02981 Aquilegia oxysepala HOM05D001780 ORTHO05D005322 7.9e-57 224.6 175 65.1
C02p57010 Brassica napus HOM05D001780 ORTHO05D005322 1.0e-56 224.2 164 65.2
BolC2t11771H Brassica oleracea HOM05D001780 ORTHO05D005322 1.0e-56 224.2 164 65.2
PSO210G4510 Papaver somniferum HOM05D001780 ORTHO05D005322 3.0e-56 222.6 169 65.7
Aa31sc180G20 Aethionema arabicum HOM05D001780 ORTHO05D005322 3.9e-56 222.2 175 61.7
AL8G22400 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 3.9e-56 222.2 175 61.7
Sed0021413 Sechium edule HOM05D001780 ORTHO05D005322 3.9e-56 222.2 168 65.5
BcaC03g17692 Brassica carinata HOM05D001780 ORTHO05D005322 6.6e-56 221.5 164 65.2
Carub.0008s0885 Capsella rubella HOM05D001780 ORTHO05D005322 1.1e-55 220.7 175 61.7
Manes.03G195400 Manihot esculenta HOM05D001780 ORTHO05D005322 1.1e-55 220.7 175 64.6
MELO3C006665.2 Cucumis melo HOM05D001780 ORTHO05D005322 3.3e-55 219.2 168 65.5
CsaV3_3G014640 Cucumis sativus L. HOM05D001780 ORTHO05D005322 5.6e-55 218.4 168 64.9
RcHm_v2.0_Chr4g0422271 Rosa chinensis HOM05D001780 ORTHO05D005322 1.3e-54 217.2 175 64.0
TPR.G13840 Trifolium pratense HOM05D001780 ORTHO05D005322 1.3e-54 217.2 153 69.3
FvH4_4g18060 Fragaria vesca HOM05D001780 ORTHO05D005322 2.1e-54 216.5 163 67.5
FAN12G1911 Fragaria x ananassa HOM05D001780 ORTHO05D005322 1.1e-53 214.2 163 66.9
Eucgr.H03916 Eucalyptus grandis HOM05D001780 ORTHO05D005322 1.4e-53 213.8 169 65.7
FAN12G3693 Fragaria x ananassa HOM05D001780 ORTHO05D005322 4.0e-53 212.2 163 66.9
FAN07G2352 Fragaria x ananassa HOM05D000639 ORTHO05D005322 6.9e-53 211.5 161 67.1
FAN17G0722 Fragaria x ananassa HOM05D001780 ORTHO05D005322 9.0e-53 211.1 161 67.1
PGR004G0386 Punica granatum HOM05D001780 ORTHO05D005322 2.6e-52 209.5 169 64.5
arahy.Tifrunner.gnm1.ann1.A68CME Arachis hypogaea HOM05D001780 ORTHO05D005322 5.8e-52 208.4 205 53.2
Eucgr.H03911 Eucalyptus grandis HOM05D001780 ORTHO05D005322 4.9e-51 205.3 162 65.4
HPP92_016436 Vanilla planifolia HOM05D001780 ORTHO05D005322 8.4e-51 204.5 152 65.8
Actinidia40255 Actinidia chinensis HOM05D001780 ORTHO05D005322 4.2e-50 202.2 175 60.6
SEGI_15432 Sequoiadendron giganteum HOM05D001780 ORTHO05D005322 1.0e-48 197.6 168 57.1
Os02g0778200 Oryza sativa ssp. japonica HOM05D001780 ORTHO05D005322 1.6e-46 190.3 164 57.3
Zm00001eb256880 Zea mays HOM05D001780 ORTHO05D005322 1.8e-45 186.8 164 56.7
COL.COLO4_04957 Corchorus olitorius HOM05D001780 ORTHO05D005322 1.5e-39 167.2 121 67.8
ATR0796G005 Amborella trichopoda HOM05D001780 ORTHO05D005322 2.8e-38 162.9 141 60.3
Pp3c17_5990 Physcomitrium patens HOM05D001780 ORTHO05D005322 3.7e-38 162.5 175 50.9
Mapoly0002s0241 Marchantia polymorpha HOM05D001780 ORTHO05D005322 1.2e-36 157.5 168 48.8
SMO230G0004 Selaginella moellendorffii HOM05D001780 ORTHO05D005322 5.1e-32 142.1 172 49.4
SMO367G0518 Selaginella moellendorffii HOM05D001780 ORTHO05D005322 1.9e-31 140.2 172 48.8
CBR_g29448 Chara braunii HOM05D001780 ORTHO05D005322 2.2e-30 136.7 154 48.7
AL8G22430 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 5.0e-27 125.6 96 61.5
AagrBONN_evm.TU.Sc2ySwM_340.179 Anthoceros agrestis HOM05D001780 ORTHO05D005322 6.5e-27 125.2 155 48.4
PRCOL_00005558 Prasinoderma coloniale HOM05D001780 ORTHO05D005322 1.3e-19 100.9 154 40.9
CDE01G0296 Ceratophyllum demersum HOM05D001780 ORTHO05D005322 6.1e-17 92.0 85 62.4
Cre16.g689871 Chlamydomonas reinhardtii HOM05D001780 ORTHO05D005322 2.3e-16 90.1 150 36.0
Atru.chr4.2840 Acer truncatum HOM05D001780 ORTHO05D005322 2.6e-15 86.7 223 31.4
Haze_01210 Corylus avellana HOM05D001780 ORTHO05D005322 4.4e-15 85.9 52 75.0
Pp3s46_440 Physcomitrium patens HOM05D001780 ORTHO05D005322 1.4e-13 80.9 145 33.8
MCO13G360 Micromonas commoda HOM05D001780 ORTHO05D005322 5.3e-13 79.0 157 31.8
AL8G22410 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 7.5e-07 58.5 59 49.2


User provided reference genes

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