Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 2.8e-97 358.6 180 100.0
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 1.5e-82 309.7 192 82.8
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 4.5e-79 298.1 184 81.0
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 4.5e-79 298.1 184 81.0
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 5.8e-79 297.7 184 80.4
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 6.5e-78 294.3 184 79.9
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 1.9e-77 292.7 184 79.3
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 1.0e-75 287.0 176 81.2
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 1.3e-75 286.6 185 78.9
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 1.8e-75 286.2 182 80.8
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 5.1e-75 284.6 176 81.2
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 8.7e-75 283.9 182 80.2
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 1.1e-74 283.5 177 79.7
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 1.1e-74 283.5 177 79.7
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 1.1e-74 283.5 176 81.2
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 1.9e-74 282.7 177 79.1
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 5.7e-74 281.2 182 81.9
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 1.3e-73 280.0 180 78.9
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 1.3e-73 280.0 176 80.1
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 2.8e-73 278.9 179 79.3
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 2.8e-73 278.9 182 78.0
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 6.3e-73 277.7 177 81.4
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 6.3e-73 277.7 178 79.2
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 1.8e-72 276.2 181 77.9
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 6.9e-72 274.2 180 76.1
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 6.9e-72 274.2 180 76.1
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 5.9e-71 271.2 180 77.2
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 1.3e-70 270.0 183 76.0
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 1.3e-70 270.0 182 78.6
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 1.3e-70 270.0 182 79.1
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 2.9e-70 268.9 177 78.5
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 3.2e-69 265.4 182 76.4
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 4.2e-69 265.0 181 74.6
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 4.2e-69 265.0 181 74.6
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 5.5e-69 264.6 187 72.2
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 5.5e-69 264.6 182 76.9
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 5.5e-69 264.6 175 77.1
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 5.5e-69 264.6 174 74.1
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 9.3e-69 263.8 181 74.0
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 9.3e-69 263.8 181 74.0
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 9.3e-69 263.8 169 78.7
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 9.3e-69 263.8 171 76.0
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.2e-68 263.5 177 75.7
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 1.2e-68 263.5 171 76.0
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.2e-68 263.5 171 76.0
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 1.6e-68 263.1 181 74.0
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 2.1e-68 262.7 182 74.2
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 2.7e-68 262.3 175 76.6
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 3.6e-68 261.9 184 75.0
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 3.6e-68 261.9 178 74.2
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 3.6e-68 261.9 177 74.6
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 3.6e-68 261.9 179 74.9
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 4.6e-68 261.5 174 75.3
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 4.6e-68 261.5 175 76.6
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 7.9e-68 260.8 171 75.4
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 1.0e-67 260.4 182 76.4
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 1.0e-67 260.4 181 75.1
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.3e-67 260.0 182 72.5
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 1.8e-67 259.6 177 73.4
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 1.8e-67 259.6 184 73.4
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 3.0e-67 258.8 176 75.6
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 3.0e-67 258.8 180 71.1
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 3.9e-67 258.5 180 73.9
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 8.7e-67 257.3 182 72.5
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 1.1e-66 256.9 175 74.3
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 1.1e-66 256.9 180 73.3
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.9e-66 256.1 177 74.6
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 2.5e-66 255.8 178 74.2
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.3e-66 255.4 182 70.9
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 3.3e-66 255.4 184 72.3
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 4.3e-66 255.0 180 72.2
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 5.7e-66 254.6 177 75.1
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 7.4e-66 254.2 174 74.1
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 1.3e-65 253.4 184 72.8
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 2.8e-65 252.3 175 73.1
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 3.7e-65 251.9 182 73.1
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 3.7e-65 251.9 171 74.3
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 4.8e-65 251.5 182 71.4
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 4.8e-65 251.5 175 73.1
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 8.2e-65 250.8 177 72.3
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 1.1e-64 250.4 172 75.0
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 1.4e-64 250.0 178 73.0
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 1.8e-64 249.6 181 69.1
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 4.1e-64 248.4 177 71.2
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 9.1e-64 247.3 179 73.2
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 5.9e-63 244.6 180 70.0
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 5.9e-63 244.6 181 70.7
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 1.0e-62 243.8 179 70.4
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 1.3e-62 243.4 169 74.6
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.7e-62 243.0 177 70.1
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 2.2e-62 242.7 179 66.5
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 3.8e-62 241.9 184 69.6
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 8.5e-62 240.7 185 68.6
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 1.4e-61 240.0 182 70.3
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 2.5e-61 239.2 178 69.7
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 5.5e-61 238.0 182 67.6
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 5.5e-61 238.0 175 70.9
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 5.5e-61 238.0 167 73.1
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 2.7e-60 235.7 185 68.1
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 2.7e-60 235.7 176 69.9
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 2.7e-60 235.7 180 67.8
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 3.6e-60 235.3 179 69.8
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 3.6e-60 235.3 179 69.8
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 7.9e-60 234.2 182 69.2
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 1.4e-59 233.4 177 69.5
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 3.9e-59 231.9 176 68.2
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 6.7e-59 231.1 140 81.4
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 8.8e-59 230.7 174 69.0
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 8.8e-59 230.7 174 69.0
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 1.1e-58 230.3 170 68.8
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 1.1e-58 230.3 175 67.4
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 1.5e-58 229.9 170 68.8
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 2.0e-58 229.6 180 65.6
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 4.4e-58 228.4 176 67.6
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 4.4e-58 228.4 177 64.4
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 7.4e-58 227.6 152 77.0
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 1.3e-57 226.9 177 66.7
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 1.7e-57 226.5 171 67.8
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 3.7e-57 225.3 172 66.9
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 3.7e-57 225.3 175 65.1
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 6.3e-57 224.6 191 63.4
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 1.1e-56 223.8 158 70.9
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 1.8e-56 223.0 174 66.1
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 3.1e-56 222.2 153 71.2
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 1.0e-54 217.2 182 67.0
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 2.2e-54 216.1 133 82.7
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 3.8e-54 215.3 168 66.7
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 7.2e-53 211.1 138 73.9
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 7.9e-52 207.6 178 63.5
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 1.8e-51 206.5 171 62.6
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 3.3e-50 202.2 249 48.2
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 3.7e-49 198.7 118 79.7
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 1.3e-46 190.3 192 58.3
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 8.5e-46 187.6 179 55.3
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 7.2e-45 184.5 145 65.5
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 1.4e-43 180.3 167 55.7
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 3.0e-43 179.1 143 59.4
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 4.0e-43 178.7 183 54.1
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 5.7e-42 174.9 186 51.1
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 2.3e-35 152.9 119 69.7
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 1.5e-34 150.2 90 77.8
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 2.0e-34 149.8 180 48.9
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 2.6e-34 149.4 132 60.6
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 9.1e-32 141.0 87 75.9
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.0e-31 139.8 83 74.7
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 7.7e-31 137.9 175 48.6
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 6.5e-30 134.8 125 61.6
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 6.5e-30 134.8 83 74.7
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 8.6e-30 134.4 113 61.9
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 2.8e-28 129.4 104 68.3
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 2.7e-23 112.8 127 47.2
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 1.0e-22 110.9 87 69.0
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 1.0e-22 110.9 87 69.0
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 6.6e-22 108.2 127 42.5
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 1.6e-20 103.6 86 64.0
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 1.8e-19 100.1 105 46.7
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 2.3e-19 99.8 87 64.4
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 1.3e-17 94.0 160 37.5
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.3e-13 79.3 47 76.6
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 7.3e-13 78.2 84 50.0
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 2.8e-12 76.3 70 58.6
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 2.3e-11 73.2 79 57.0
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 4.0e-11 72.4 87 49.4
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 8.9e-11 71.2 89 37.1
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 1.0e-06 57.8 191 32.5


User provided reference genes

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