Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025996.1 Olea europaea HOM05D003169 ORTHO05D003700 1.3e-210 736.1 363 100.0
Oeu005061.1 Olea europaea HOM05D003169 ORTHO05D003700 3.3e-137 492.3 346 75.1
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 3.0e-130 469.2 344 72.4
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 3.0e-130 469.2 345 71.6
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 1.5e-126 456.8 344 67.7
Cc00_g09110 Coffea canephora HOM05D003169 ORTHO05D003700 7.0e-124 448.0 350 67.4
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 1.0e-122 444.1 352 64.8
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 1.0e-122 444.1 352 64.8
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 6.6e-122 441.4 343 65.9
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.9e-121 439.9 346 64.7
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 2.5e-121 439.5 346 64.7
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 3.3e-121 439.1 346 64.7
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.2e-120 437.2 342 64.3
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 2.8e-120 436.0 363 62.8
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.4e-119 433.7 356 62.9
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 1.4e-119 433.7 344 66.3
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 2.3e-119 433.0 339 65.5
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 4.0e-119 432.2 345 66.4
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 4.0e-119 432.2 342 64.9
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 5.2e-119 431.8 351 63.8
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 8.9e-119 431.0 303 72.6
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 2.0e-118 429.9 355 62.5
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 3.4e-118 429.1 326 65.3
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 7.5e-118 427.9 343 63.0
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 9.9e-118 427.6 346 67.1
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 2.9e-117 426.0 343 66.8
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 2.9e-117 426.0 343 64.7
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 3.2e-116 422.5 347 65.1
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 5.4e-116 421.8 316 65.8
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 7.1e-116 421.4 311 66.9
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.1e-115 419.9 350 62.3
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.1e-115 419.9 350 62.3
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 2.7e-115 419.5 356 63.5
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 2.7e-115 419.5 357 61.1
MBI18_g42879_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 7.8e-115 417.9 345 63.8
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.0e-114 417.5 435 53.6
Lj2A8G63 Lonicera japonica HOM05D003169 ORTHO05D003700 1.3e-114 417.2 353 63.2
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.7e-114 416.8 318 64.8
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 1.7e-114 416.8 353 62.9
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 2.3e-114 416.4 355 62.8
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 2.3e-114 416.4 353 60.9
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 3.9e-114 415.6 319 64.6
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 1.1e-113 414.1 352 61.4
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.1e-113 414.1 352 61.4
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.1e-113 414.1 335 63.0
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 1.9e-113 413.3 326 66.6
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.3e-113 412.5 335 63.0
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 9.5e-113 411.0 319 63.0
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.6e-112 410.2 359 60.2
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.6e-112 410.2 355 60.6
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 1.6e-112 410.2 349 60.5
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 6.2e-112 408.3 330 61.5
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 6.2e-112 408.3 328 64.6
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 8.1e-112 407.9 314 65.6
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.1e-111 407.5 330 61.8
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 2.4e-111 406.4 332 62.3
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 3.1e-111 406.0 319 62.4
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 4.0e-111 405.6 366 61.5
CiPaw.15G112000 Carya illinoinensis HOM05D003169 ORTHO05D003700 5.2e-111 405.2 308 65.9
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 5.2e-111 405.2 316 63.3
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 8.9e-111 404.4 364 57.7
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 8.9e-111 404.4 344 65.4
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 5.8e-110 401.7 363 58.4
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 5.8e-110 401.7 319 64.3
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 6.4e-109 398.3 300 66.7
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 3.2e-108 396.0 337 61.4
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 5.4e-108 395.2 325 61.5
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 3.5e-107 392.5 378 56.6
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 3.5e-107 392.5 338 59.8
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 7.8e-107 391.3 361 58.2
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 1.0e-106 391.0 398 52.8
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.3e-106 390.6 418 52.9
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.7e-106 390.2 315 62.9
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 6.6e-106 388.3 360 57.5
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 8.7e-106 387.9 334 59.6
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 2.5e-105 386.3 319 62.1
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 3.3e-105 386.0 361 56.2
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 3.3e-105 386.0 326 60.1
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 4.3e-105 385.6 361 56.0
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 4.3e-105 385.6 325 62.2
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 5.6e-105 385.2 329 60.5
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 5.6e-105 385.2 333 59.5
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 5.6e-105 385.2 333 59.5
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 5.6e-105 385.2 361 57.6
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 7.3e-105 384.8 329 60.8
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 8.1e-104 381.3 333 59.2
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 1.1e-103 380.9 365 56.2
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 4.0e-103 379.0 354 56.5
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 9.9e-102 374.4 321 59.8
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 4.2e-100 369.0 346 54.0
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 7.8e-99 364.8 346 57.2
Nitab4.5_0007774g0010 Nicotiana tabacum HOM05D003169 ORTHO05D003700 3.0e-98 362.8 320 63.1
Nitab4.5_0003291g0050 Nicotiana tabacum HOM05D003169 ORTHO05D003700 4.3e-97 359.0 318 63.5
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 5.6e-97 358.6 329 54.4
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 2.4e-95 353.2 343 59.8
HanXRQChr13g0408921 Helianthus annuus HOM05D003169 ORTHO05D003700 1.3e-93 347.4 300 58.3
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.3e-93 347.4 300 58.3
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 1.2e-91 340.9 369 53.9
Os08g0223700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.8e-88 329.7 329 52.3
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 1.4e-87 327.4 307 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 2.0e-86 323.6 298 56.7
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.6e-83 313.9 330 48.8
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 1.6e-83 313.9 306 52.3
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 2.3e-82 310.1 330 48.5
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 6.7e-82 308.5 342 50.3
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 1.9e-81 307.0 248 64.5
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 1.4e-79 300.8 243 62.6
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 1.2e-78 297.7 287 56.1
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 2.2e-77 293.5 323 49.5
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 2.1e-75 287.0 319 49.8
VMungo1127G0472 Vigna mungo HOM05D003169 ORTHO05D003700 3.9e-74 282.7 158 82.9
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 8.2e-72 275.0 247 53.8
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 1.1e-71 274.6 309 50.5
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 1.4e-71 274.2 249 55.0
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 1.3e-69 267.7 159 78.0
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.3e-69 267.7 159 78.0
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 2.2e-69 266.9 252 53.2
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.1e-68 264.6 151 83.4
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 5.5e-68 262.3 163 74.8
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 2.1e-67 260.4 254 53.1
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 1.8e-66 257.3 154 77.3
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 3.0e-66 256.5 159 74.2
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 8.8e-66 255.0 219 59.8
Cpa.g.sc32.155 Carica papaya HOM05D003169 ORTHO05D003700 8.5e-61 238.4 128 88.3
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 3.6e-59 233.0 377 38.7
MD07G1097900 Malus domestica HOM05D003169 ORTHO05D003700 6.5e-53 212.2 131 76.3
TPR.G3613 Trifolium pratense HOM05D003169 ORTHO05D003700 3.9e-50 203.0 154 65.6
PGSC0003DMG400011248 Solanum tuberosum HOM05D003169 ORTHO05D003700 7.2e-44 182.2 164 57.9
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 8.0e-43 178.7 101 82.2
Cpa.g.sc32.156 Carica papaya HOM05D003169 ORTHO05D003700 1.4e-42 177.9 127 63.0
SGA_v2.0_scaffold4G01863 Striga asiatica HOM05D003169 ORTHO05D003700 3.8e-37 159.8 116 69.8
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 2.7e-35 153.7 144 51.4
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 2.3e-34 150.6 136 55.1
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.5e-33 147.9 142 52.1
VMungo1127G0791 Vigna mungo HOM05D003169 ORTHO05D003700 5.4e-31 139.4 128 53.1
COL.COLO4_25000 Corchorus olitorius HOM05D003169 ORTHO05D003700 8.6e-29 132.1 116 56.9
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 4.7e-27 126.3 143 46.9
TPR.G373 Trifolium pratense HOM05D003169 ORTHO05D003700 8.0e-27 125.6 122 56.6
Hund12039 Selenicereus undatus HOM05D003169 ORTHO05D003700 3.0e-26 123.6 109 52.3
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 3.7e-24 116.7 122 50.0
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 6.3e-24 115.9 118 49.2
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 1.1e-23 115.2 132 47.7
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.0e-21 108.6 119 47.9
Actinidia33342 Actinidia chinensis HOM05D003169 ORTHO05D003700 5.2e-18 96.3 50 92.0
QL04p095737 Quercus lobata HOM05D003169 ORTHO05D003700 1.4e-15 88.2 138 40.6
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.2e-14 85.1 97 44.3
Os04g0610200 Oryza sativa ssp. japonica HOM05D034463 ORTHO05D036998 1.0e-13 82.0 132 38.6
Potri.002G262101 Populus trichocarpa HOM05D003169 ORTHO05D003700 2.6e-09 67.4 33 87.9
Cre02.g095052 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 3.4e-09 67.0 63 52.4


User provided reference genes

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