Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025793.1 Olea europaea HOM05D004045 ORTHO05D004923 0.0e+00 1206.0 607 100.0
MSTRG.21511 Avicennia marina HOM05D004045 ORTHO05D004923 4.3e-235 818.1 609 71.3
SGA_v2.0_scaffold138G35275 Striga asiatica HOM05D004045 ORTHO05D004923 2.2e-226 789.3 620 67.3
Migut.D00375 Erythranthe guttata HOM05D004045 ORTHO05D004923 1.7e-223 779.6 609 70.1
Dinv22479 Davidia involucrata HOM05D004045 ORTHO05D004923 2.2e-223 779.2 618 68.0
Nitab4.5_0004899g0010 Nicotiana tabacum HOM05D004045 ORTHO05D004923 8.5e-223 777.3 615 66.3
SGA_v2.0_scaffold1G00558 Striga asiatica HOM05D004045 ORTHO05D004923 6.1e-221 771.2 601 67.4
Actinidia09090 Actinidia chinensis HOM05D004045 ORTHO05D004923 3.0e-220 768.8 607 68.4
Nitab4.5_0001044g0050 Nicotiana tabacum HOM05D004045 ORTHO05D004923 1.1e-219 766.9 614 65.5
PGSC0003DMG400019300 Solanum tuberosum HOM05D004045 ORTHO05D004923 3.3e-219 765.4 602 67.1
SalBow4G0878 Salvia bowleyana HOM05D004045 ORTHO05D004923 7.4e-219 764.2 553 71.2
Sopen09g027670 Solanum pennellii HOM05D004045 ORTHO05D004923 8.2e-218 760.8 605 66.9
Nitab4.5_0000187g0210 Nicotiana tabacum HOM05D004045 ORTHO05D004923 9.1e-217 757.3 636 64.8
TAR362G1267 Trochodendron aralioides HOM05D004045 ORTHO05D004923 1.5e-216 756.5 609 66.8
vmacro14871 Vaccinium macrocarpon HOM05D004045 ORTHO05D004923 1.7e-215 753.1 610 66.6
Cc01_g18840 Coffea canephora HOM05D004045 ORTHO05D004923 1.8e-212 743.0 616 64.3
Gorai.001G243100 Gossypium raimondii HOM05D004045 ORTHO05D004923 8.8e-212 740.7 617 64.0
Peaxi162Scf00049g00208 Petunia axillaris HOM05D004045 ORTHO05D004923 8.8e-212 740.7 612 64.9
Gohir.D07G215300 Gossypium hirsutum HOM05D004045 ORTHO05D004923 1.5e-211 740.0 617 63.9
CAN.G1259.1 Capsicum annuum HOM05D004045 ORTHO05D004923 2.6e-211 739.2 596 66.6
Gorai.001G243000 Gossypium raimondii HOM05D004045 ORTHO05D004923 2.6e-211 739.2 616 63.3
Nitab4.5_0003053g0010 Nicotiana tabacum HOM05D004045 ORTHO05D004923 7.4e-211 737.6 626 64.5
Gohir.D07G215000 Gossypium hirsutum HOM05D004045 ORTHO05D004923 8.2e-210 734.2 617 63.0
Solyc06g084060.3 Solanum lycopersicum HOM05D004045 ORTHO05D004923 8.2e-210 734.2 607 66.1
Gohir.A07G209100 Gossypium hirsutum HOM05D004045 ORTHO05D004923 1.8e-209 733.0 611 63.7
Peaxi162Scf01311g00024 Petunia axillaris HOM05D004045 ORTHO05D004923 2.4e-209 732.6 613 63.9
Sopen06g035450 Solanum pennellii HOM05D004045 ORTHO05D004923 9.1e-209 730.7 607 65.7
PGSC0003DMG400020140 Solanum tuberosum HOM05D004045 ORTHO05D004923 9.1e-209 730.7 603 65.8
CiPaw.03G257500 Carya illinoinensis HOM05D004045 ORTHO05D004923 1.3e-207 726.9 621 63.9
PGR119G1275 Punica granatum HOM05D004045 ORTHO05D004923 4.2e-206 721.8 613 63.9
VMungo0720G0425 Vigna mungo HOM05D004045 ORTHO05D004923 1.6e-205 719.9 599 63.6
GSVIVG01000724001 Vitis vinifera HOM05D004045 ORTHO05D004923 4.7e-205 718.4 606 64.4
TWI12G0443 Tripterygium wilfordii HOM05D004045 ORTHO05D004923 1.0e-204 717.2 606 64.7
Actinidia19983 Actinidia chinensis HOM05D004045 ORTHO05D004923 2.6e-203 712.6 484 75.0
Lsat_1_v5_gn_9_9980 Lactuca sativa HOM05D004045 ORTHO05D004923 2.6e-203 712.6 608 61.8
Rhsim01G0269600 Rhododendron simsii HOM05D004045 ORTHO05D004923 2.6e-203 712.6 606 64.7
Ciclev10019274m.g Citrus clementina HOM05D004045 ORTHO05D004923 3.3e-203 712.2 600 64.0
Manes.01G201500 Manihot esculenta HOM05D004045 ORTHO05D004923 5.7e-203 711.4 615 63.7
Phvul.007G176500 Phaseolus vulgaris HOM05D004045 ORTHO05D004923 1.7e-202 709.9 592 63.2
Potri.005G218400 Populus trichocarpa HOM05D004045 ORTHO05D004923 4.8e-202 708.4 608 62.8
QL12p042733 Quercus lobata HOM05D004045 ORTHO05D004923 1.1e-201 707.2 621 62.2
TWI18G1228 Tripterygium wilfordii HOM05D004045 ORTHO05D004923 4.1e-201 705.3 605 63.1
Haze_24534 Corylus avellana HOM05D004045 ORTHO05D004923 7.0e-201 704.5 608 63.5
Glyma.19G161300 Glycine max HOM05D004045 ORTHO05D004923 1.2e-200 703.7 604 62.9
Nn3g19505 Nelumbo nucifera HOM05D004045 ORTHO05D004923 4.5e-200 701.8 590 62.5
Cpa.g.sc52.91 Carica papaya HOM05D004045 ORTHO05D004923 5.9e-200 701.4 605 63.5
Atru.chr5.1570 Acer truncatum HOM05D004045 ORTHO05D004923 1.3e-199 700.3 600 62.5
CSS0003244 Camellia sinensis var. sinensis HOM05D004045 ORTHO05D004923 2.9e-199 699.1 608 63.0
arahy.Tifrunner.gnm1.ann1.ZDV5ZG Arachis hypogaea HOM05D004045 ORTHO05D004923 3.2e-198 695.7 592 62.2
Potri.002G044800 Populus trichocarpa HOM05D004045 ORTHO05D004923 4.2e-198 695.3 612 61.1
Lalb_Chr02g0142411 Lupinus albus HOM05D004045 ORTHO05D004923 9.4e-198 694.1 607 61.1
arahy.Tifrunner.gnm1.ann1.4ZN8WV Arachis hypogaea HOM05D004045 ORTHO05D004923 1.2e-197 693.7 592 62.5
Thecc.01G267300 Theobroma cacao HOM05D004045 ORTHO05D004923 2.1e-197 693.0 593 62.6
MD05G1205600 Malus domestica HOM05D004045 ORTHO05D004923 2.7e-197 692.6 632 60.6
Cfa002328 Carpinus fangiana HOM05D004045 ORTHO05D004923 6.1e-197 691.4 607 62.9
Dinv34570 Davidia involucrata HOM05D004045 ORTHO05D004923 6.1e-197 691.4 529 70.1
Duzib133G0161 Durio zibethinus HOM05D004045 ORTHO05D004923 8.0e-197 691.0 596 63.4
HanXRQChr15g0467051 Helianthus annuus HOM05D004045 ORTHO05D004923 1.4e-196 690.3 653 57.0
Nn1g02572 Nelumbo nucifera HOM05D004045 ORTHO05D004923 1.4e-196 690.3 618 61.8
ECA247G4082 Erigeron canadensis HOM05D004045 ORTHO05D004923 2.3e-196 689.5 632 58.7
CSS0008019 Camellia sinensis var. sinensis HOM05D004045 ORTHO05D004923 1.5e-195 686.8 612 63.4
MD10G1192800 Malus domestica HOM05D004045 ORTHO05D004923 5.7e-195 684.9 623 60.4
HanXRQChr10g0281461 Helianthus annuus HOM05D004045 ORTHO05D004923 7.5e-195 684.5 621 58.0
Duzib211G0616 Durio zibethinus HOM05D004045 ORTHO05D004923 9.8e-195 684.1 609 61.2
Duzib138G0995 Durio zibethinus HOM05D004045 ORTHO05D004923 3.7e-194 682.2 591 63.1
Sabra05G0167500 Salix brachista HOM05D004045 ORTHO05D004923 6.3e-194 681.4 610 62.0
DCAR_018449 Daucus carota HOM05D004045 ORTHO05D004923 8.3e-194 681.0 607 61.1
arahy.Tifrunner.gnm1.ann1.M5F7QZ Arachis hypogaea HOM05D004045 ORTHO05D004923 1.4e-193 680.2 631 59.6
Glyma.10G032000 Glycine max HOM05D004045 ORTHO05D004923 1.8e-193 679.9 598 60.5
CsaV3_7G027590 Cucumis sativus L. HOM05D004045 ORTHO05D004923 4.1e-193 678.7 596 60.6
MELO3C015764.2 Cucumis melo HOM05D004045 ORTHO05D004923 5.4e-193 678.3 596 60.1
Glyma.02G142300 Glycine max HOM05D004045 ORTHO05D004923 5.4e-193 678.3 596 61.9
unitig_22.g5466 Utricularia gibba HOM05D004045 ORTHO05D004923 9.1e-193 677.6 601 61.4
VMungo1383G3440 Vigna mungo HOM05D004045 ORTHO05D004923 9.1e-193 677.6 574 63.4
Ca_09715_v3 Cicer arietinum L. HOM05D004045 ORTHO05D004923 1.2e-192 677.2 597 61.3
MBI11_g02060_MAGBIO Magnolia biondii HOM05D004045 ORTHO05D004923 1.6e-192 676.8 602 61.0
Phvul.001G156800 Phaseolus vulgaris HOM05D004045 ORTHO05D004923 2.7e-192 676.0 596 61.6
arahy.Tifrunner.gnm1.ann1.CU0E1J Arachis hypogaea HOM05D004045 ORTHO05D004923 4.5e-192 675.2 613 60.0
Glyma.03G158900 Glycine max HOM05D004045 ORTHO05D004923 7.7e-192 674.5 600 60.3
Lj2A1159T22 Lonicera japonica HOM05D004045 ORTHO05D004923 7.7e-192 674.5 611 61.7
Psat6g057800 Pisum sativum HOM05D004045 ORTHO05D004923 4.2e-190 668.7 637 59.0
THA.LOC104804696 Tarenaya hassleriana HOM05D004045 ORTHO05D004923 4.2e-190 668.7 587 61.0
Lj5g0016746 Lotus japonicus HOM05D004045 ORTHO05D004923 1.6e-189 666.8 600 61.0
TPR.G35731 Trifolium pratense HOM05D004045 ORTHO05D004923 6.1e-189 664.8 611 60.4
Lalb_Chr21g0306291 Lupinus albus HOM05D004045 ORTHO05D004923 1.8e-188 663.3 603 60.0
CANSAT01G0779 Cannabis sativa HOM05D004045 ORTHO05D004923 3.0e-188 662.5 624 58.7
Sed0019687 Sechium edule HOM05D004045 ORTHO05D004923 6.8e-188 661.4 598 59.7
Sabra02G0035900 Salix brachista HOM05D004045 ORTHO05D004923 8.9e-188 661.0 682 55.0
ClCG09G007540 Citrullus lanatus HOM05D004045 ORTHO05D004923 1.5e-187 660.2 571 61.8
Medtr1g070515 Medicago truncatula HOM05D004045 ORTHO05D004923 1.5e-187 660.2 609 60.4
Prupe.8G232000 Prunus persica HOM05D004045 ORTHO05D004923 2.8e-186 656.0 624 58.2
Eucgr.B01491 Eucalyptus grandis HOM05D004045 ORTHO05D004923 4.9e-186 655.2 616 58.8
Thhalv10010227m.g Eutrema salsugineum HOM05D004045 ORTHO05D004923 1.1e-185 654.1 611 58.3
AL5G35730 Arabidopsis lyrata HOM05D004045 ORTHO05D004923 1.8e-185 653.3 610 59.0
Sed0014339 Sechium edule HOM05D004045 ORTHO05D004923 1.8e-185 653.3 606 58.1
TAR633G0766 Trochodendron aralioides HOM05D004045 ORTHO05D004923 4.1e-185 652.1 607 59.1
AT3G54650 Arabidopsis thaliana HOM05D004045 ORTHO05D004923 4.5e-184 648.7 610 58.7
THA.LOC104824390 Tarenaya hassleriana HOM05D004045 ORTHO05D004923 4.5e-184 648.7 599 58.9
Aqoxy5G00345 Aquilegia oxysepala HOM05D004045 ORTHO05D004923 5.9e-184 648.3 604 59.3
Aa31sc64G70 Aethionema arabicum HOM05D004045 ORTHO05D004923 1.7e-183 646.7 610 58.0
CiPaw.04G182000 Carya illinoinensis HOM05D004045 ORTHO05D004923 1.7e-183 646.7 518 66.8
PSO210G5962 Papaver somniferum HOM05D004045 ORTHO05D004923 1.5e-182 643.7 676 53.3
Carub.0005s2125 Capsella rubella HOM05D004045 ORTHO05D004923 1.9e-182 643.3 611 58.4
BcaC07g39799 Brassica carinata HOM05D004045 ORTHO05D004923 2.5e-182 642.9 599 59.3
BolC8t50591H Brassica oleracea HOM05D004045 ORTHO05D004923 3.6e-181 639.0 598 59.2
PSO832G0351 Papaver somniferum HOM05D004045 ORTHO05D004923 4.7e-181 638.6 653 54.4
C08p29800 Brassica napus HOM05D004045 ORTHO05D004923 6.1e-181 638.3 599 59.1
FAN20G1895 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.5e-179 633.6 610 57.2
Ah.11g049960 Amaranthus hybridus HOM05D004045 ORTHO05D004923 2.0e-179 633.3 591 58.4
FAN27G3048 Fragaria x ananassa HOM05D004045 ORTHO05D004923 2.0e-179 633.3 620 56.5
BcaB01g00171 Brassica carinata HOM05D004045 ORTHO05D004923 2.6e-179 632.9 610 58.2
CARHR164560 Cardamine hirsuta HOM05D004045 ORTHO05D004923 3.4e-179 632.5 612 57.4
FvH4_2g22510 Fragaria vesca HOM05D004045 ORTHO05D004923 4.9e-178 628.6 617 57.1
A09p47600 Brassica napus HOM05D004045 ORTHO05D004923 6.4e-178 628.2 598 58.5
BraA09t40216Z Brassica rapa HOM05D004045 ORTHO05D004923 6.4e-178 628.2 598 58.7
RcHm_v2.0_Chr6g0289551 Rosa chinensis HOM05D004045 ORTHO05D004923 1.2e-176 624.0 628 55.9
Hund02880 Selenicereus undatus HOM05D004045 ORTHO05D004923 1.2e-176 624.0 579 58.4
FAN15G1994 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.6e-176 623.6 613 57.1
EL10Ac5g10476 Beta vulgaris HOM05D004045 ORTHO05D004923 2.7e-176 622.9 601 56.7
FAN15G3229 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.8e-172 610.1 648 54.0
FAN24G3385 Fragaria x ananassa HOM05D004045 ORTHO05D004923 1.8e-172 610.1 633 55.0
Gohir.A07G209200 Gossypium hirsutum HOM05D004045 ORTHO05D004923 5.2e-172 608.6 505 65.5
Sp5g07800 Schrenkiella parvula HOM05D004045 ORTHO05D004923 1.2e-171 607.4 611 56.3
ATR0665G431 Amborella trichopoda HOM05D004045 ORTHO05D004923 2.0e-171 606.7 613 55.1
A04p05190 Brassica napus HOM05D004045 ORTHO05D004923 4.3e-166 589.0 601 55.1
BraA04t16229Z Brassica rapa HOM05D004045 ORTHO05D004923 4.9e-162 575.5 574 56.6
AUR62032255 Chenopodium quinoa HOM05D004045 ORTHO05D004923 3.2e-161 572.8 478 62.1
BcaC02g09055 Brassica carinata HOM05D004045 ORTHO05D004923 7.1e-161 571.6 578 54.8
HPP92_015890 Vanilla planifolia HOM05D004045 ORTHO05D004923 7.1e-161 571.6 592 54.1
CDE06G0297 Ceratophyllum demersum HOM05D004045 ORTHO05D004923 1.1e-158 564.3 563 56.3
Sc24g0004300 Simmondsia chinensis HOM05D004045 ORTHO05D004923 9.5e-158 561.2 513 59.5
C04p37930 Brassica napus HOM05D004045 ORTHO05D004923 2.8e-157 559.7 573 54.5
CDE02G4505 Ceratophyllum demersum HOM05D004045 ORTHO05D004923 1.1e-156 557.8 582 54.3
BcaB02g08450 Brassica carinata HOM05D004045 ORTHO05D004923 2.3e-151 540.0 601 52.2
HPP92_026284 Vanilla planifolia HOM05D004045 ORTHO05D004923 2.4e-148 530.0 643 49.8
Oeu010137.1 Olea europaea HOM05D004045 ORTHO05D004923 1.6e-144 517.3 316 84.2
Os12g0601000 Oryza sativa ssp. japonica HOM05D004045 ORTHO05D004923 1.3e-143 514.2 575 49.7
SHI09942 Sapria himalayana HOM05D004045 ORTHO05D004923 4.3e-142 509.2 604 49.0
Zm00001eb135530 Zea mays HOM05D004045 ORTHO05D004923 1.8e-140 503.8 624 48.2
Solyc09g065880.4 Solanum lycopersicum HOM05D004045 ORTHO05D004923 2.4e-140 503.4 337 76.6
Zm00001eb051080 Zea mays HOM05D004045 ORTHO05D004923 2.9e-138 496.5 588 48.6
BolC4t25368H Brassica oleracea HOM05D004045 ORTHO05D004923 7.1e-137 491.9 457 58.2
AUR62011940 Chenopodium quinoa HOM05D004045 ORTHO05D004923 5.1e-135 485.7 384 66.1
HPP92_015894 Vanilla planifolia HOM05D004045 ORTHO05D004923 6.7e-135 485.3 458 56.8
Zm00001eb031170 Zea mays HOM05D004045 ORTHO05D004923 5.5e-113 412.5 390 56.4
SEGI_41615 Sequoiadendron giganteum HOM05D004045 ORTHO05D004923 4.2e-105 386.3 647 37.6
Os03g0633400 Oryza sativa ssp. japonica HOM05D004045 ORTHO05D004923 6.3e-101 372.5 333 58.9
COL.COLO4_06074 Corchorus olitorius HOM05D004045 ORTHO05D004923 3.2e-97 360.1 383 54.8
Oeu039511.1 Olea europaea HOM05D004045 ORTHO05D004923 2.3e-71 274.2 256 59.8
Oeu009234.1 Olea europaea HOM05D004045 ORTHO05D004923 4.4e-70 270.0 163 86.5
arahy.Tifrunner.gnm1.ann1.RJD5GQ Arachis hypogaea HOM05D004045 ORTHO05D004923 6.8e-63 246.1 273 54.9
arahy.Tifrunner.gnm1.ann1.X4NPJI Arachis hypogaea HOM05D004045 ORTHO05D004923 1.3e-61 241.9 233 60.5
Hma1.2p1_0744F.1_g211840 Hydrangea macrophylla HOM05D004045 ORTHO05D004923 1.6e-48 198.4 138 76.8
CBR_g27883 Chara braunii HOM05D004045 ORTHO05D004923 2.1e-35 154.8 386 30.6
CBR_g29330 Chara braunii HOM05D004045 ORTHO05D004923 5.1e-34 150.2 561 25.0
Sc24g0004260 Simmondsia chinensis HOM05D004045 ORTHO05D004923 1.5e-30 138.7 167 53.3
PRCOL_00001919 Prasinoderma coloniale HOM05D004045 ORTHO05D004923 1.7e-29 135.2 555 24.0
Psat7g235240 Pisum sativum HOM05D004045 ORTHO05D004923 1.3e-26 125.6 84 70.2
Lj1g0005140 Lotus japonicus HOM05D004045 ORTHO05D004923 2.0e-22 111.7 80 60.0
Medtr2g066740 Medicago truncatula HOM05D004045 ORTHO05D004923 3.4e-22 110.9 94 56.4
Medtr0878s0020 Medicago truncatula HOM05D004045 ORTHO05D004923 2.9e-21 107.8 87 57.5
Oeu010133.1 Olea europaea HOM05D010114 ORTHO05D000601 4.9e-21 107.1 70 71.4
arahy.Tifrunner.gnm1.ann1.KW8Q2S Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-17 94.4 66 78.8
PSO591G0166 Papaver somniferum HOM05D004045 ORTHO05D004923 2.8e-16 91.3 86 58.1
Os03g0633100 Oryza sativa ssp. japonica HOM05D004045 ORTHO05D004923 6.2e-16 90.1 198 33.3
Rhsim04G0076300 Rhododendron simsii HOM05D004045 ORTHO05D004923 1.5e-14 85.5 135 42.2
Psat7g221000 Pisum sativum HOM05D004045 ORTHO05D004923 4.5e-14 84.0 100 47.0
Rhsim07G0057800 Rhododendron simsii HOM05D003247 ORTHO05D003974 4.5e-14 84.0 62 67.7
AUR62027361 Chenopodium quinoa HOM05D004045 ORTHO05D005832 4.6e-11 73.9 103 43.7
Lsat_1_v5_gn_5_80480 Lactuca sativa HOM05D004045 ORTHO05D002405 1.8e-07 62.0 35 82.9
Lsat_1_v5_gn_1_65601 Lactuca sativa HOM05D001017 ORTHO05D001025 5.3e-07 60.5 36 80.6
Hma1.2p1_0172F.1_g076230 Hydrangea macrophylla HOM05D004045 ORTHO05D004923 9.0e-07 59.7 35 80.0
AUR62026403 Chenopodium quinoa HOM05D012008 ORTHO05D014086 5.9e-06 57.0 67 47.8


User provided reference genes

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