Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025610.1 Olea europaea HOM05D005234 ORTHO05D006583 3.6e-140 501.5 243 100.0
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 2.5e-72 276.2 231 58.4
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 6.1e-71 271.6 224 60.7
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 9.7e-69 264.2 223 57.4
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.6e-68 263.5 223 59.6
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 2.9e-65 252.7 230 57.0
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 9.4e-64 247.7 193 65.3
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 8.8e-62 241.1 213 55.4
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 2.0e-61 240.0 214 56.5
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 2.5e-61 239.6 216 56.5
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 4.3e-61 238.8 230 52.2
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.8e-60 236.1 214 55.1
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 8.2e-60 234.6 211 55.5
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 1.4e-59 233.8 222 51.4
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 2.4e-59 233.0 210 52.9
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 4.1e-59 232.3 217 51.2
Sopen06g012760 Solanum pennellii HOM05D005234 ORTHO05D006583 1.2e-58 230.7 228 56.1
TAR623G0173 Trochodendron aralioides HOM05D005234 ORTHO05D006583 1.2e-58 230.7 223 51.1
Thecc.10G063300 Theobroma cacao HOM05D005234 ORTHO05D006583 2.0e-58 229.9 218 52.8
FvH4_7g20720 Fragaria vesca HOM05D005234 ORTHO05D006583 1.3e-57 227.3 219 49.3
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 1.3e-57 227.3 214 50.9
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 3.8e-57 225.7 180 58.9
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 5.0e-57 225.3 214 51.9
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 6.5e-57 224.9 181 59.1
Prupe.2G224300 Prunus persica HOM05D005234 ORTHO05D006583 6.5e-57 224.9 183 56.3
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.1e-56 224.2 205 53.2
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 1.9e-56 223.4 215 51.6
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 3.2e-56 222.6 191 56.0
vmacro07108 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 4.2e-56 222.2 180 59.4
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 9.4e-56 221.1 222 45.9
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 9.4e-56 221.1 217 52.5
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 1.6e-55 220.3 184 56.5
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 2.1e-55 219.9 224 50.0
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 2.1e-55 219.9 205 52.7
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 2.7e-55 219.5 185 57.3
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 4.7e-55 218.8 196 54.1
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 6.1e-55 218.4 222 49.5
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 1.0e-54 217.6 187 58.3
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 3.9e-54 215.7 205 51.2
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 5.1e-54 215.3 196 55.1
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 5.1e-54 215.3 185 51.9
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 1.1e-53 214.2 232 51.7
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 1.5e-53 213.8 181 58.0
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 3.3e-53 212.6 225 49.3
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 4.4e-53 212.2 187 52.4
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 2.2e-52 209.9 204 49.5
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 2.8e-52 209.5 180 58.3
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 2.8e-52 209.5 215 51.2
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 2.8e-52 209.5 198 53.0
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 4.8e-52 208.8 218 49.1
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 4.8e-52 208.8 218 49.1
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 8.2e-52 208.0 218 49.1
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 1.8e-51 206.8 185 54.1
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 3.1e-51 206.1 218 48.6
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 4.1e-51 205.7 220 47.7
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 9.1e-51 204.5 218 48.2
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 3.5e-50 202.6 175 54.9
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 3.5e-50 202.6 192 50.5
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 3.5e-50 202.6 196 45.4
BraA09t38797Z Brassica rapa HOM05D005234 ORTHO05D006583 6.5e-49 198.4 226 47.3
Solyc06g036700.3 Solanum lycopersicum HOM05D005234 ORTHO05D006583 8.5e-49 198.0 186 57.0
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 1.9e-48 196.8 178 53.4
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.5e-48 196.4 183 50.8
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.5e-48 196.4 183 50.8
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 5.5e-48 195.3 204 46.6
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 1.2e-47 194.1 225 46.2
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.6e-47 192.6 204 46.1
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 4.7e-47 192.2 189 46.0
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 6.1e-47 191.8 180 51.7
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.1e-45 187.6 194 50.0
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 4.4e-45 185.7 194 50.0
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 3.7e-44 182.6 198 49.5
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 2.4e-43 179.9 210 47.1
MD00G1163800 Malus domestica HOM05D005234 ORTHO05D006583 3.1e-43 179.5 147 56.5
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 9.1e-43 177.9 195 50.8
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 1.6e-42 177.2 225 41.8
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 5.0e-41 172.2 134 60.4
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 5.0e-41 172.2 219 44.3
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 8.5e-41 171.4 170 51.8
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 1.5e-40 170.6 169 50.3
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 3.2e-40 169.5 153 53.6
Sc09g0006860 Simmondsia chinensis HOM05D005234 ORTHO05D006583 5.5e-40 168.7 148 52.7
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 1.6e-39 167.2 167 49.1
SEGI_20375 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 3.0e-38 162.9 166 45.2
Atru.chr12.595 Acer truncatum HOM05D005234 ORTHO05D006583 5.3e-35 152.1 144 55.6
Ah.16g107860 Amaranthus hybridus HOM05D005234 ORTHO05D006583 5.9e-34 148.7 112 61.6
Psat6g238640 Pisum sativum HOM05D005234 ORTHO05D006583 5.0e-33 145.6 138 47.8
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.2e-31 141.0 126 53.2
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 6.1e-31 138.7 171 40.4
Aqoxy4G03096 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 6.8e-30 135.2 109 56.9
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 2.8e-28 129.8 171 38.0
SMO367G0389 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 3.7e-28 129.4 189 35.4
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 1.8e-27 127.1 110 53.6
SMO367G1161 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 2.4e-27 126.7 190 33.2
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 7.0e-27 125.2 109 53.2
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 4.5e-26 122.5 223 35.4
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.3e-25 120.9 198 38.4
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 2.1e-23 113.6 188 30.9
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.9e-22 108.2 159 38.4
SMO340G0223 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.8e-19 100.5 175 35.4
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 7.0e-19 98.6 166 35.5
SMO275G0053 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 2.9e-17 93.2 163 31.3
Hma1.2p1_0348F.1_g131700 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 3.9e-17 92.8 66 63.6
MD01G1116400 Malus domestica HOM05D005234 ORTHO05D006583 3.9e-17 92.8 90 53.3
Atru.chr12.596 Acer truncatum HOM05D005234 ORTHO05D006583 3.3e-16 89.7 78 52.6
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 7.3e-16 88.6 115 46.1
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 6.1e-15 85.5 142 32.4
SMO367G1158 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.0e-15 85.1 138 35.5
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 2.3e-14 83.6 78 50.0
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 4.0e-14 82.8 130 33.8
Hund25214 Selenicereus undatus HOM05D005456 ORTHO05D006805 1.2e-13 81.3 193 30.1
SMO094G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 5.8e-13 79.0 206 26.2
MD01G1116800 Malus domestica HOM05D005234 ORTHO05D006583 2.2e-12 77.0 78 39.7
AUR62005833 Chenopodium quinoa HOM05D005456 ORTHO05D006805 4.9e-12 75.9 232 28.4
CSS0014292 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 6.4e-12 75.5 220 26.8
CSS0028557 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 6.4e-12 75.5 220 26.8
EL10Ac6g13252 Beta vulgaris HOM05D005456 ORTHO05D006805 1.4e-11 74.3 190 30.5
AUR62032826 Chenopodium quinoa HOM05D005456 ORTHO05D006805 4.1e-11 72.8 232 28.4
Ah.03g134770 Amaranthus hybridus HOM05D005456 ORTHO05D006805 1.6e-10 70.9 194 28.9
CDE07G0572 Ceratophyllum demersum HOM05D005456 ORTHO05D006805 2.0e-10 70.5 208 25.0
Actinidia33219 Actinidia chinensis HOM05D005456 ORTHO05D006805 4.6e-10 69.3 190 26.8
CARHR165100 Cardamine hirsuta HOM05D005234 ORTHO05D006583 1.0e-09 68.2 60 56.7
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 1.3e-09 67.8 65 44.6
Dinv16685 Davidia involucrata HOM05D005456 ORTHO05D006805 2.3e-09 67.0 197 27.9
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 3.0e-09 66.6 167 29.3
Migut.L01253 Erythranthe guttata HOM05D005456 ORTHO05D006805 8.6e-09 65.1 241 25.7
BolC8t50639H Brassica oleracea HOM05D005234 ORTHO05D006583 7.3e-08 62.0 45 62.2
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 1.6e-07 60.8 220 24.5
arahy.Tifrunner.gnm1.ann1.IYSU3D Arachis hypogaea HOM05D005234 ORTHO05D006583 2.1e-07 60.5 92 38.0
Sc04g0007920 Simmondsia chinensis HOM05D005456 ORTHO05D006805 2.1e-07 60.5 190 23.7
Zm00001eb359140 Zea mays HOM05D005656 ORTHO05D007094 3.6e-07 59.7 205 26.3
SGA_v2.0_scaffold455G51903 Striga asiatica HOM05D005456 ORTHO05D006805 6.2e-07 58.9 193 25.4
Os12g0236900 Oryza sativa ssp. japonica HOM05D005656 ORTHO05D007094 2.3e-06 57.0 114 29.8
Gohir.D11G069000 Gossypium hirsutum HOM05D005656 ORTHO05D007094 5.2e-06 55.8 154 26.6
Gorai.007G073800 Gossypium raimondii HOM05D005656 ORTHO05D007094 5.2e-06 55.8 154 26.6
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 5.2e-06 55.8 38 63.2
Lj2g0013537 Lotus japonicus HOM05D005656 ORTHO05D007094 5.2e-06 55.8 151 28.5
BcaB08g36971 Brassica carinata HOM05D005656 ORTHO05D007094 6.8e-06 55.5 194 26.8
Zm00001eb158830 Zea mays HOM05D005656 ORTHO05D007094 8.9e-06 55.1 153 28.1


User provided reference genes

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