Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu024726.1 Olea europaea HOM05D002805 ORTHO05D003209 1.1e-69 266.5 135 100.0
Oeu036163.1 Olea europaea HOM05D002805 ORTHO05D003209 3.4e-55 218.4 136 81.6
Cc06_g02870 Coffea canephora HOM05D002805 ORTHO05D003209 5.6e-50 201.1 137 75.2
Oeu024360.2 Olea europaea HOM05D002805 ORTHO05D003209 6.2e-49 197.6 134 73.9
Dinv35626 Davidia involucrata HOM05D002805 ORTHO05D003209 8.9e-48 193.7 136 71.3
Dinv37198 Davidia involucrata HOM05D002805 ORTHO05D003209 2.2e-46 189.1 136 69.1
MSTRG.19098 Avicennia marina HOM05D002805 ORTHO05D003209 2.3e-43 179.1 136 67.6
SalBow4G1307 Salvia bowleyana HOM05D002805 ORTHO05D003209 5.1e-43 177.9 138 68.8
GSVIVG01034212001 Vitis vinifera HOM05D002805 ORTHO05D003209 5.1e-43 177.9 136 66.9
Lj2A98G41 Lonicera japonica HOM05D002805 ORTHO05D003209 2.5e-42 175.6 148 64.2
SGA_v2.0_scaffold35G14216 Striga asiatica HOM05D002805 ORTHO05D003209 1.2e-41 173.3 150 62.7
Nn2g10424 Nelumbo nucifera HOM05D002805 ORTHO05D003209 2.1e-41 172.6 136 64.0
CiPaw.09G190100 Carya illinoinensis HOM05D002805 ORTHO05D003209 4.7e-41 171.4 136 64.0
Oeu060046.1 Olea europaea HOM05D002805 ORTHO05D003209 4.7e-41 171.4 136 69.9
Duzib128G1300 Durio zibethinus HOM05D002805 ORTHO05D003209 4.0e-40 168.3 136 62.5
Lj2A2G30 Lonicera japonica HOM05D002805 ORTHO05D003209 4.0e-40 168.3 148 62.8
TAR369G0725 Trochodendron aralioides HOM05D002805 ORTHO05D003209 3.4e-39 165.2 137 63.5
Actinidia13136 Actinidia chinensis HOM05D002805 ORTHO05D003209 5.8e-39 164.5 137 65.7
Peaxi162Scf00165g01842 Petunia axillaris HOM05D002805 ORTHO05D003209 5.8e-39 164.5 136 60.3
Nitab4.5_0000761g0010 Nicotiana tabacum HOM05D002805 ORTHO05D003209 1.7e-38 162.9 136 62.5
Eucgr.K03154 Eucalyptus grandis HOM05D002805 ORTHO05D003209 2.9e-38 162.2 136 61.0
CSS0003067 Camellia sinensis var. sinensis HOM05D002805 ORTHO05D003209 3.8e-38 161.8 143 60.8
CSS0047255 Camellia sinensis var. sinensis HOM05D002805 ORTHO05D003209 3.8e-38 161.8 143 60.8
Nitab4.5_0004091g0010 Nicotiana tabacum HOM05D002805 ORTHO05D003209 3.8e-38 161.8 136 61.8
TAR633G1330 Trochodendron aralioides HOM05D002805 ORTHO05D003209 4.9e-38 161.4 138 63.8
Ciclev10013094m.g Citrus clementina HOM05D002805 ORTHO05D003209 1.9e-37 159.5 135 62.2
TWI53G0560 Tripterygium wilfordii HOM05D002805 ORTHO05D003209 5.4e-37 157.9 136 59.6
TWI77G0646 Tripterygium wilfordii HOM05D002805 ORTHO05D003209 2.7e-36 155.6 136 61.0
DCAR_017880 Daucus carota HOM05D002805 ORTHO05D003209 3.5e-36 155.2 139 61.9
Glyma.13G131300 Glycine max HOM05D002805 ORTHO05D003209 3.5e-36 155.2 169 49.1
PGSC0003DMG400008921 Solanum tuberosum HOM05D002805 ORTHO05D003209 3.5e-36 155.2 139 59.0
Sopen09g005250 Solanum pennellii HOM05D002805 ORTHO05D003209 1.3e-35 153.3 139 58.3
Thecc.05G043300 Theobroma cacao HOM05D002805 ORTHO05D003209 3.0e-35 152.1 136 59.6
CAN.G97.34 Capsicum annuum HOM05D002805 ORTHO05D003209 3.9e-35 151.8 139 59.0
Gohir.D01G209500 Gossypium hirsutum HOM05D002805 ORTHO05D003209 5.1e-35 151.4 137 62.0
Gorai.002G255000 Gossypium raimondii HOM05D002805 ORTHO05D003209 5.1e-35 151.4 137 62.0
Solyc09g010520.3 Solanum lycopersicum HOM05D002805 ORTHO05D003209 5.1e-35 151.4 139 57.6
Nitab4.5_0000202g0200 Nicotiana tabacum HOM05D002805 ORTHO05D003209 6.6e-35 151.0 136 59.6
Gohir.A01G220500 Gossypium hirsutum HOM05D002805 ORTHO05D003209 1.5e-34 149.8 137 61.3
Duzib093G1169 Durio zibethinus HOM05D002805 ORTHO05D003209 1.9e-34 149.4 131 60.3
CANSAT35G0658 Cannabis sativa HOM05D002805 ORTHO05D003209 2.5e-34 149.1 136 58.8
Hma1.2p1_1065F.1_g253685 Hydrangea macrophylla HOM05D002805 ORTHO05D003209 3.3e-34 148.7 135 56.3
Migut.L01929 Erythranthe guttata HOM05D002805 ORTHO05D003209 4.3e-34 148.3 140 60.0
Gorai.012G102200 Gossypium raimondii HOM05D002805 ORTHO05D003209 5.6e-34 147.9 136 56.6
TAR623G1730 Trochodendron aralioides HOM05D002805 ORTHO05D003209 5.6e-34 147.9 137 62.0
Manes.09G087400 Manihot esculenta HOM05D002805 ORTHO05D003209 3.6e-33 145.2 145 54.5
Duzib106G1368 Durio zibethinus HOM05D002805 ORTHO05D003209 6.2e-33 144.4 136 56.6
Actinidia19765 Actinidia chinensis HOM05D002805 ORTHO05D003209 1.1e-32 143.7 136 60.3
Gohir.A04G081500 Gossypium hirsutum HOM05D002805 ORTHO05D003209 1.1e-32 143.7 136 55.1
EL10Ac5g11600 Beta vulgaris HOM05D002805 ORTHO05D003209 1.8e-32 142.9 138 59.4
Nitab4.5_0000216g0100 Nicotiana tabacum HOM05D002805 ORTHO05D003209 2.4e-32 142.5 136 60.3
Gohir.D04G120100 Gossypium hirsutum HOM05D002805 ORTHO05D003209 4.0e-32 141.7 136 54.4
Ca_09609_v3 Cicer arietinum L. HOM05D002805 ORTHO05D003209 6.9e-32 141.0 171 47.4
Glyma.10G043600 Glycine max HOM05D002805 ORTHO05D003209 1.5e-31 139.8 169 46.2
Phvul.007G157400 Phaseolus vulgaris HOM05D002805 ORTHO05D003209 1.5e-31 139.8 170 45.9
CSS0025427 Camellia sinensis var. sinensis HOM05D002805 ORTHO05D003209 3.4e-31 138.7 138 61.6
PGR004G0650 Punica granatum HOM05D002805 ORTHO05D003209 4.4e-31 138.3 136 55.1
QL03p017217 Quercus lobata HOM05D002805 ORTHO05D003209 5.8e-31 137.9 135 59.3
Aqoxy4G02988 Aquilegia oxysepala HOM05D002805 ORTHO05D003209 7.6e-31 137.5 139 55.4
FAN09G0953 Fragaria x ananassa HOM05D002805 ORTHO05D003209 7.6e-31 137.5 135 55.6
Sabra06G0063700 Salix brachista HOM05D002805 ORTHO05D003209 7.6e-31 137.5 138 57.2
FAN05G5737 Fragaria x ananassa HOM05D002805 ORTHO05D003209 9.9e-31 137.1 135 56.3
Sed0027255 Sechium edule HOM05D002805 ORTHO05D003209 9.9e-31 137.1 164 51.8
VMungo0720G0923 Vigna mungo HOM05D002805 ORTHO05D003209 9.9e-31 137.1 170 45.3
AUR62041756 Chenopodium quinoa HOM05D002805 ORTHO05D003209 1.7e-30 136.3 138 58.0
Sc01g0004240 Simmondsia chinensis HOM05D002805 ORTHO05D003209 2.9e-30 135.6 138 57.2
Haze_20754 Corylus avellana HOM05D002805 ORTHO05D003209 3.8e-30 135.2 139 58.3
QL07p047532 Quercus lobata HOM05D002805 ORTHO05D003209 3.8e-30 135.2 135 58.5
QL07p047730 Quercus lobata HOM05D002805 ORTHO05D003209 3.8e-30 135.2 135 58.5
MD12G1139600 Malus domestica HOM05D002805 ORTHO05D003209 4.9e-30 134.8 135 56.3
Sopen10g034130 Solanum pennellii HOM05D002805 ORTHO05D003209 4.9e-30 134.8 136 55.9
AUR62043298 Chenopodium quinoa HOM05D002805 ORTHO05D003209 6.4e-30 134.4 138 57.2
ECA248G0585 Erigeron canadensis HOM05D002805 ORTHO05D003209 6.4e-30 134.4 148 54.7
vmacro20129 Vaccinium macrocarpon HOM05D002805 ORTHO05D003209 1.1e-29 133.7 136 57.4
CAN.G324.2 Capsicum annuum HOM05D002805 ORTHO05D003209 2.4e-29 132.5 137 54.7
PGSC0003DMG401011001 Solanum tuberosum HOM05D002805 ORTHO05D003209 2.4e-29 132.5 136 54.4
Solyc10g084690.2 Solanum lycopersicum HOM05D002805 ORTHO05D003209 3.2e-29 132.1 136 58.1
MSTRG.26762 Avicennia marina HOM05D002805 ORTHO05D003209 5.4e-29 131.3 136 57.4
ClCG10G021000 Citrullus lanatus HOM05D002805 ORTHO05D003209 5.4e-29 131.3 143 52.4
Medtr1g069000 Medicago truncatula HOM05D002805 ORTHO05D003209 5.4e-29 131.3 172 45.3
PGR004G0741 Punica granatum HOM05D002805 ORTHO05D003209 1.2e-28 130.2 136 55.1
TPR.G22576 Trifolium pratense HOM05D002805 ORTHO05D003209 1.6e-28 129.8 171 44.4
COL.COLO4_14842 Corchorus olitorius HOM05D002805 ORTHO05D003209 2.7e-28 129.0 138 57.2
SGA_v2.0_scaffold94G28576 Striga asiatica HOM05D002805 ORTHO05D003209 2.7e-28 129.0 149 53.7
PSO648G0031 Papaver somniferum HOM05D002805 ORTHO05D003209 1.7e-27 126.3 153 51.0
Peaxi162Scf00094g01917 Petunia axillaris HOM05D002805 ORTHO05D003209 2.3e-27 125.9 135 51.9
TAR636G0753 Trochodendron aralioides HOM05D002805 ORTHO05D003209 2.3e-27 125.9 114 58.8
PSO339G0044 Papaver somniferum HOM05D002805 ORTHO05D003209 3.0e-27 125.6 155 49.7
Psat6g065760 Pisum sativum HOM05D002805 ORTHO05D003209 5.1e-27 124.8 168 45.8
Atru.chr8.1945 Acer truncatum HOM05D002805 ORTHO05D003209 8.7e-27 124.0 136 50.7
ECA238G2922 Erigeron canadensis HOM05D002805 ORTHO05D003209 1.1e-26 123.6 136 48.5
Migut.J00348 Erythranthe guttata HOM05D002805 ORTHO05D003209 1.9e-26 122.9 138 54.3
Lalb_Chr02g0153031 Lupinus albus HOM05D002805 ORTHO05D003209 1.9e-26 122.9 167 44.3
MELO3C009269.2 Cucumis melo HOM05D002805 ORTHO05D003209 2.5e-26 122.5 146 54.8
Lj5g0019116 Lotus japonicus HOM05D002805 ORTHO05D003209 3.3e-26 122.1 172 43.0
Rhsim05G0188400 Rhododendron simsii HOM05D002805 ORTHO05D003209 4.3e-26 121.7 136 57.4
Prupe.6G251500 Prunus persica HOM05D002805 ORTHO05D003209 5.6e-26 121.3 135 57.0
CsaV3_3G035010 Cucumis sativus L. HOM05D002805 ORTHO05D003209 9.6e-26 120.6 151 53.0
MD04G1124300 Malus domestica HOM05D002805 ORTHO05D003209 9.6e-26 120.6 135 54.8
Potri.016G095100 Populus trichocarpa HOM05D002805 ORTHO05D003209 2.1e-25 119.4 136 52.9
Aqoxy2G02040 Aquilegia oxysepala HOM05D002805 ORTHO05D003209 6.2e-25 117.9 138 54.3
Sp5g08670 Schrenkiella parvula HOM05D002805 ORTHO05D003209 6.2e-25 117.9 145 51.7
Glyma.19G172700 Glycine max HOM05D002805 ORTHO05D003209 3.1e-24 115.5 171 43.3
Cfa017417 Carpinus fangiana HOM05D002805 ORTHO05D003209 1.2e-23 113.6 139 52.5
THA.LOC104806570 Tarenaya hassleriana HOM05D002805 ORTHO05D003209 5.8e-23 111.3 141 50.4
Glyma.03G171800 Glycine max HOM05D002805 ORTHO05D003209 7.6e-23 110.9 172 41.3
AT3G53710 Arabidopsis thaliana HOM05D002805 ORTHO05D003209 1.7e-22 109.8 146 48.6
Carub.0005s2029 Capsella rubella HOM05D002805 ORTHO05D003209 1.7e-22 109.8 145 48.3
Lalb_Chr21g0314281 Lupinus albus HOM05D002805 ORTHO05D003209 1.7e-22 109.8 169 40.8
Phvul.001G169400 Phaseolus vulgaris HOM05D002805 ORTHO05D003209 3.8e-22 108.6 170 39.4
Sed0012263 Sechium edule HOM05D002805 ORTHO05D003209 6.4e-22 107.8 143 51.0
AL5G34680 Arabidopsis lyrata HOM05D002805 ORTHO05D003209 8.4e-22 107.5 145 48.3
CARHR163600 Cardamine hirsuta HOM05D002805 ORTHO05D003209 1.4e-21 106.7 142 48.6
Hma1.2p1_1481F.1_g286130 Hydrangea macrophylla HOM05D002805 ORTHO05D003209 1.4e-21 106.7 99 65.7
Ca_08780_v3 Cicer arietinum L. HOM05D002805 ORTHO05D003209 2.4e-21 105.9 138 48.6
Hma1.2p1_1707F.1_g298480 Hydrangea macrophylla HOM05D002805 ORTHO05D003209 2.4e-21 105.9 97 61.9
Psat0s350g0120 Pisum sativum HOM05D002805 ORTHO05D003209 7.1e-21 104.4 136 47.1
FAN14G3148 Fragaria x ananassa HOM05D002805 ORTHO05D003209 1.2e-20 103.6 136 50.7
Lj1g0012032 Lotus japonicus HOM05D002805 ORTHO05D003209 1.2e-20 103.6 168 45.8
Lalb_Chr20g0113281 Lupinus albus HOM05D002805 ORTHO05D003209 1.2e-20 103.6 165 41.2
HanXRQChr11g0349271 Helianthus annuus HOM05D002805 ORTHO05D003209 2.7e-20 102.4 148 47.3
FvH4_6g14160 Fragaria vesca HOM05D002805 ORTHO05D003209 4.6e-20 101.7 136 50.0
DCAR_009588 Daucus carota HOM05D002805 ORTHO05D003209 6.0e-20 101.3 143 44.1
Lalb_Chr06g0171001 Lupinus albus HOM05D002805 ORTHO05D003209 6.0e-20 101.3 136 49.3
MBI05_g10362_MAGBIO Magnolia biondii HOM05D002805 ORTHO05D003209 1.0e-19 100.5 156 48.1
VMungo1383G0260 Vigna mungo HOM05D002805 ORTHO05D003209 1.3e-19 100.1 169 38.5
BolC8t50502H Brassica oleracea HOM05D002805 ORTHO05D003209 3.9e-19 98.6 142 47.9
Medtr7g099830 Medicago truncatula HOM05D002805 ORTHO05D003209 5.1e-19 98.2 107 53.3
RcHm_v2.0_Chr3g0467101 Rosa chinensis HOM05D002805 ORTHO05D003209 6.7e-19 97.8 136 48.5
A04p05920 Brassica napus HOM05D002805 ORTHO05D003209 8.7e-19 97.4 144 47.2
BraA04t16296Z Brassica rapa HOM05D002805 ORTHO05D003209 8.7e-19 97.4 144 47.2
A09p46670 Brassica napus HOM05D002805 ORTHO05D003209 1.5e-18 96.7 142 47.9
Potri.006G084000 Populus trichocarpa HOM05D002805 ORTHO05D003209 1.9e-18 96.3 138 46.4
BraA09t40130Z Brassica rapa HOM05D002805 ORTHO05D003209 2.5e-18 95.9 142 47.2
Lsat_1_v5_gn_1_55521 Lactuca sativa HOM05D002805 ORTHO05D003209 9.6e-18 94.0 144 45.1
BolC4t25456H Brassica oleracea HOM05D002805 ORTHO05D003209 2.1e-17 92.8 145 45.5
Gohir.D08G111200 Gossypium hirsutum HOM05D002805 ORTHO05D003209 2.1e-17 92.8 70 67.1
arahy.Tifrunner.gnm1.ann1.XA3BQV Arachis hypogaea HOM05D002805 ORTHO05D003209 2.8e-17 92.4 161 41.0
arahy.Tifrunner.gnm1.ann1.XLY65R Arachis hypogaea HOM05D002805 ORTHO05D003209 2.8e-17 92.4 161 41.0
BcaB02g08514 Brassica carinata HOM05D002805 ORTHO05D003209 4.8e-17 91.7 144 45.8
C04p38840 Brassica napus HOM05D002805 ORTHO05D003209 8.1e-17 90.9 145 45.5
BcaC02g09139 Brassica carinata HOM05D002805 ORTHO05D003209 1.1e-16 90.5 145 45.5
arahy.Tifrunner.gnm1.ann1.023UF6 Arachis hypogaea HOM05D002805 ORTHO05D003209 1.4e-16 90.1 241 29.9
arahy.Tifrunner.gnm1.ann1.0ZTH3B Arachis hypogaea HOM05D002805 ORTHO05D003209 1.4e-16 90.1 236 32.2
unitig_749.g14252 Utricularia gibba HOM05D002805 ORTHO05D003209 4.0e-16 88.6 136 47.1
Lsat_1_v5_gn_2_111501 Lactuca sativa HOM05D002805 ORTHO05D003209 5.3e-16 88.2 152 42.8
Os03g0278400 Oryza sativa ssp. japonica HOM05D002805 ORTHO05D003209 5.3e-16 88.2 135 45.2
Lj3A970T59 Lonicera japonica HOM05D002805 ORTHO05D003209 9.0e-16 87.4 147 43.5
Sp4g19870 Schrenkiella parvula HOM05D002805 ORTHO05D003209 2.6e-15 85.9 177 40.1
Lsat_1_v5_gn_2_111481 Lactuca sativa HOM05D002805 ORTHO05D003209 5.8e-15 84.7 143 42.0
MBI14_g24318_MAGBIO Magnolia biondii HOM05D002805 ORTHO05D003209 7.6e-15 84.3 135 48.1
Zm00001eb012610 Zea mays HOM05D002805 ORTHO05D003209 7.6e-15 84.3 140 44.3
Ah.12g062360 Amaranthus hybridus HOM05D002805 ORTHO05D003209 1.3e-14 83.6 140 43.6
C08p28990 Brassica napus HOM05D002805 ORTHO05D003209 1.3e-14 83.6 138 44.9
CDE07G0929 Ceratophyllum demersum HOM05D002805 ORTHO05D003209 1.3e-14 83.6 137 43.1
HanXRQChr07g0196241 Helianthus annuus HOM05D002805 ORTHO05D003209 3.8e-14 82.0 140 42.9
CDE04G1149 Ceratophyllum demersum HOM05D002805 ORTHO05D003209 8.4e-14 80.9 128 47.7
Aa31LG10G9330 Aethionema arabicum HOM05D002805 ORTHO05D003209 3.2e-13 79.0 139 39.6
ATR0559G121 Amborella trichopoda HOM05D002805 ORTHO05D003209 3.2e-13 79.0 140 42.9
Thhalv10010333m.g Eutrema salsugineum HOM05D002805 ORTHO05D003209 5.5e-13 78.2 147 42.2
Oeu059170.1 Olea europaea HOM05D002805 ORTHO05D003209 2.1e-12 76.3 65 58.5
Gohir.A09G157700 Gossypium hirsutum HOM05D002805 ORTHO05D003209 4.6e-12 75.1 132 39.4
BcaB01g00251 Brassica carinata HOM05D002805 ORTHO05D003209 6.0e-12 74.7 142 43.0
Gohir.D09G153000 Gossypium hirsutum HOM05D002805 ORTHO05D003209 6.0e-12 74.7 127 40.9
BcaB02g08513 Brassica carinata HOM05D002805 ORTHO05D003209 7.9e-12 74.3 144 42.4
Gorai.006G174500 Gossypium raimondii HOM05D002805 ORTHO05D003209 7.9e-12 74.3 127 40.9
A03p20710 Brassica napus HOM05D002805 ORTHO05D003209 1.1e-10 70.5 165 38.2
Cpa.g.sc11.174 Carica papaya HOM05D002805 ORTHO05D003209 1.5e-10 70.1 59 59.3
BraA03t11312Z Brassica rapa HOM05D002805 ORTHO05D003209 3.3e-10 68.9 165 37.6
BcaC02g11863 Brassica carinata HOM05D002805 ORTHO05D003209 5.6e-10 68.2 169 36.1
C04p10440 Brassica napus HOM05D002805 ORTHO05D003209 5.6e-10 68.2 168 35.7
BolC4t22642H Brassica oleracea HOM05D002805 ORTHO05D003209 5.6e-10 68.2 168 35.7
PSO384G3513 Papaver somniferum HOM05D002805 ORTHO05D003209 4.8e-09 65.1 138 42.0
Zm00001eb397550 Zea mays HOM05D002805 ORTHO05D003209 8.2e-09 64.3 138 44.9
BolC3t14832H Brassica oleracea HOM05D002805 ORTHO05D003209 5.3e-08 61.6 170 34.7
HPP92_015529 Vanilla planifolia HOM05D002805 ORTHO05D003209 6.9e-08 61.2 136 42.6
BcaC01g05611 Brassica carinata HOM05D002805 ORTHO05D003209 2.0e-07 59.7 169 31.4
C03p24340 Brassica napus HOM05D002805 ORTHO05D003209 2.0e-07 59.7 169 31.4
A04p28670 Brassica napus HOM05D002805 ORTHO05D003209 3.4e-07 58.9 175 33.1
Psat0s2006g0080 Pisum sativum HOM05D000161 ORTHO05D000111 1.7e-06 56.6 77 48.1
C06p50770 Brassica napus HOM05D002805 ORTHO05D039636 8.4e-06 54.3 151 31.8
CARHR132060 Cardamine hirsuta HOM05D002805 ORTHO05D003209 8.4e-06 54.3 76 48.7


User provided reference genes

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