Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023924.1 Olea europaea HOM05D001672 ORTHO05D007349 1.1e-41 172.9 88 100.0
Oeu039502.1 Olea europaea HOM05D001672 ORTHO05D007349 6.9e-41 170.2 88 97.7
SGA_v2.0_scaffold5G02885 Striga asiatica HOM05D001672 ORTHO05D007349 5.6e-35 150.6 88 83.0
MSTRG.27943 Avicennia marina HOM05D001672 ORTHO05D007349 2.8e-34 148.3 82 90.2
CiPaw.07G029100 Carya illinoinensis HOM05D001672 ORTHO05D007349 3.1e-33 144.8 84 86.9
MBI18_g31674_MAGBIO Magnolia biondii HOM05D001672 ORTHO05D007349 4.0e-33 144.4 84 85.7
Lju926A9G33 Lonicera japonica HOM05D001672 ORTHO05D007349 5.3e-33 144.1 84 85.7
VMungo1383G1817 Vigna mungo HOM05D001672 ORTHO05D007349 6.9e-33 143.7 85 84.7
Haze_04069 Corylus avellana HOM05D001672 ORTHO05D007349 9.0e-33 143.3 84 84.5
Glyma.19G228600 Glycine max HOM05D001672 ORTHO05D007349 1.2e-32 142.9 85 84.7
PGR031G0820 Punica granatum HOM05D001672 ORTHO05D007349 2.6e-32 141.7 84 83.3
Atru.BG.131.p Acer truncatum HOM05D001672 ORTHO05D007349 4.5e-32 141.0 83 84.3
Cpa.g.sc48.155 Carica papaya HOM05D001672 ORTHO05D007349 4.5e-32 141.0 84 83.3
CANSAT54G1215 Cannabis sativa HOM05D001672 ORTHO05D007349 5.8e-32 140.6 82 85.4
AUR62000671 Chenopodium quinoa HOM05D001672 ORTHO05D007349 5.8e-32 140.6 84 82.1
QL03p013475 Quercus lobata HOM05D001672 ORTHO05D007349 5.8e-32 140.6 84 85.7
QL03p040031 Quercus lobata HOM05D001672 ORTHO05D007349 5.8e-32 140.6 84 85.7
AUR62005282 Chenopodium quinoa HOM05D001672 ORTHO05D007349 7.6e-32 140.2 84 82.1
COL.COLO4_04155 Corchorus olitorius HOM05D001672 ORTHO05D007349 7.6e-32 140.2 84 82.1
Prupe.6G313600 Prunus persica HOM05D001672 ORTHO05D007349 7.6e-32 140.2 84 83.3
Medtr7g112100 Medicago truncatula HOM05D001672 ORTHO05D007349 9.9e-32 139.8 84 82.1
Peaxi162Scf00673g00320 Petunia axillaris HOM05D001672 ORTHO05D007349 9.9e-32 139.8 84 83.3
Thecc.05G322100 Theobroma cacao HOM05D001672 ORTHO05D007349 9.9e-32 139.8 83 83.1
Ciclev10000955m.g Citrus clementina HOM05D001672 ORTHO05D007349 1.3e-31 139.4 84 82.1
Hma1.2p1_0008F-1.1_g005660 Hydrangea macrophylla HOM05D001672 ORTHO05D007349 1.3e-31 139.4 84 83.3
Lj1g0007632 Lotus japonicus HOM05D001672 ORTHO05D007349 1.3e-31 139.4 83 84.3
GSVIVG01031232001 Vitis vinifera HOM05D001672 ORTHO05D007349 1.3e-31 139.4 83 83.1
TAR362G0798 Trochodendron aralioides HOM05D001672 ORTHO05D007349 1.7e-31 139.0 84 82.1
SalBow5G0353 Salvia bowleyana HOM05D001672 ORTHO05D007349 2.2e-31 138.7 112 68.8
SalBow5G4231 Salvia bowleyana HOM05D001672 ORTHO05D007349 2.2e-31 138.7 112 68.8
CARHR055350 Cardamine hirsuta HOM05D001672 ORTHO05D007349 2.9e-31 138.3 84 82.1
Lalb_Chr18g0046081 Lupinus albus HOM05D001672 ORTHO05D007349 2.9e-31 138.3 84 81.0
PGSC0003DMG401002803 Solanum tuberosum HOM05D001672 ORTHO05D007349 2.9e-31 138.3 84 82.1
arahy.Tifrunner.gnm1.ann1.C7S1DP Arachis hypogaea HOM05D001672 ORTHO05D007349 3.8e-31 137.9 86 81.4
Nitab4.5_0000368g0140 Nicotiana tabacum HOM05D001672 ORTHO05D007349 3.8e-31 137.9 84 82.1
SalBow3G1034 Salvia bowleyana HOM05D001672 ORTHO05D007349 3.8e-31 137.9 112 67.9
Hund07142 Selenicereus undatus HOM05D001672 ORTHO05D007349 3.8e-31 137.9 84 79.8
PSO357G0676 Papaver somniferum HOM05D001672 ORTHO05D007349 4.9e-31 137.5 84 82.1
THA.LOC104816887 Tarenaya hassleriana HOM05D001672 ORTHO05D007349 4.9e-31 137.5 84 82.1
AL1G65980 Arabidopsis lyrata HOM05D001672 ORTHO05D007349 6.4e-31 137.1 83 81.9
AT1G56350 Arabidopsis thaliana HOM05D001672 ORTHO05D007349 6.4e-31 137.1 83 81.9
CSS0046553 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D007349 6.4e-31 137.1 88 79.5
CAN.G1715.4 Capsicum annuum HOM05D001672 ORTHO05D007349 6.4e-31 137.1 84 81.0
TPR.G1660 Trifolium pratense HOM05D001672 ORTHO05D007349 6.4e-31 137.1 84 81.0
Ah.06g188840 Amaranthus hybridus HOM05D001672 ORTHO05D007349 8.4e-31 136.7 84 79.8
arahy.Tifrunner.gnm1.ann1.LUDT77 Arachis hypogaea HOM05D001672 ORTHO05D007349 8.4e-31 136.7 86 80.2
BraA03t15722Z Brassica rapa HOM05D001672 ORTHO05D007349 8.4e-31 136.7 84 81.0
Eucgr.H03286 Eucalyptus grandis HOM05D001672 ORTHO05D007349 8.4e-31 136.7 83 81.9
Nn3g21681 Nelumbo nucifera HOM05D001672 ORTHO05D007349 8.4e-31 136.7 84 79.8
BcaC06g31771 Brassica carinata HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 81.0
Cc02_g34960 Coffea canephora HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 79.8
Psat3g012840 Pisum sativum HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 81.0
Potri.013G009200 Populus trichocarpa HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 81.0
Sp2g06480 Schrenkiella parvula HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 81.0
Solyc01g100420.3 Solanum lycopersicum HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 79.8
Sopen01g043940 Solanum pennellii HOM05D001672 ORTHO05D007349 1.1e-30 136.3 84 79.8
Carub.0002s0779 Capsella rubella HOM05D001672 ORTHO05D007349 1.4e-30 136.0 83 80.7
Duzib177G0460 Durio zibethinus HOM05D001672 ORTHO05D007349 1.4e-30 136.0 84 79.8
Nitab4.5_0004873g0060 Nicotiana tabacum HOM05D001672 ORTHO05D007349 1.4e-30 136.0 84 81.0
vmacro01558 Vaccinium macrocarpon HOM05D001672 ORTHO05D007349 1.4e-30 136.0 84 78.6
Aa31LG2G11500 Aethionema arabicum HOM05D001672 ORTHO05D007349 1.9e-30 135.6 84 79.8
Manes.08G111800 Manihot esculenta HOM05D001672 ORTHO05D007349 1.9e-30 135.6 83 80.7
CSS0020791 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D007349 2.5e-30 135.2 83 79.5
Thhalv10023424m.g Eutrema salsugineum HOM05D001672 ORTHO05D007349 2.5e-30 135.2 84 79.8
Sc09g0002650 Simmondsia chinensis HOM05D001672 ORTHO05D007349 3.2e-30 134.8 84 78.6
TWI36G1697 Tripterygium wilfordii HOM05D001672 ORTHO05D007349 3.2e-30 134.8 84 77.4
Aqoxy1G00753 Aquilegia oxysepala HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 77.4
BcaC02g10734 Brassica carinata HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 79.8
C04p27150 Brassica napus HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 79.8
BolC4t24075H Brassica oleracea HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 79.8
PSO170G2861 Papaver somniferum HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 81.0
Rhsim11G0094700 Rhododendron simsii HOM05D001672 ORTHO05D007349 4.2e-30 134.4 84 77.4
MELO3C015260.2 Cucumis melo HOM05D001672 ORTHO05D007349 5.5e-30 134.0 84 79.8
ATR0706G206 Amborella trichopoda HOM05D001672 ORTHO05D007349 7.1e-30 133.7 82 79.3
Gohir.A08G206100 Gossypium hirsutum HOM05D001672 ORTHO05D007349 7.1e-30 133.7 83 79.5
Gorai.004G236800 Gossypium raimondii HOM05D001672 ORTHO05D007349 7.1e-30 133.7 83 79.5
MD12G1206300 Malus domestica HOM05D001672 ORTHO05D007349 1.2e-29 132.9 84 79.8
DCAR_025276 Daucus carota HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
FvH4_6g07390 Fragaria vesca HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
FAN02G2468 Fragaria x ananassa HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
FAN14G3268 Fragaria x ananassa HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
RcHm_v2.0_Chr3g0456991 Rosa chinensis HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
Sabra13G0007800 Salix brachista HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 77.4
HPP92_003744 Vanilla planifolia HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
HPP92_003762 Vanilla planifolia HOM05D001672 ORTHO05D007349 1.6e-29 132.5 84 78.6
CsaV3_1G038310 Cucumis sativus L. HOM05D001672 ORTHO05D007349 2.1e-29 132.1 84 78.6
FAN09G3274 Fragaria x ananassa HOM05D001672 ORTHO05D007349 2.7e-29 131.7 84 77.4
Gohir.D08G222900 Gossypium hirsutum HOM05D001672 ORTHO05D007349 4.6e-29 131.0 83 78.3
EL10Ac4g09821 Beta vulgaris HOM05D001672 ORTHO05D007349 6.0e-29 130.6 84 77.4
FAN05G1868 Fragaria x ananassa HOM05D001672 ORTHO05D007349 6.0e-29 130.6 84 77.4
Sed0020329 Sechium edule HOM05D001672 ORTHO05D007349 1.3e-28 129.4 82 78.0
Zm00001eb257380 Zea mays HOM05D001672 ORTHO05D007349 1.3e-28 129.4 81 79.0
ClCG03G017680 Citrullus lanatus HOM05D001672 ORTHO05D007349 2.3e-28 128.6 84 76.2
Os03g0305700 Oryza sativa ssp. japonica HOM05D001672 ORTHO05D007349 5.1e-28 127.5 81 77.8
unitig_52.g17413 Utricularia gibba HOM05D001672 ORTHO05D007349 6.7e-28 127.1 84 78.6
HanXRQChr04g0096301 Helianthus annuus HOM05D001672 ORTHO05D007349 8.7e-28 126.7 84 75.0
CAN.G1164.37 Capsicum annuum HOM05D005004 ORTHO05D006097 1.9e-27 125.6 84 75.0
SEGI_34635 Sequoiadendron giganteum HOM05D001672 ORTHO05D007349 2.5e-27 125.2 82 74.4
Lsat_1_v5_gn_7_74521 Lactuca sativa HOM05D001672 ORTHO05D007349 2.1e-26 122.1 84 72.6
Pp3c21_10940 Physcomitrium patens HOM05D001672 ORTHO05D007349 4.6e-21 104.4 78 59.0
Mapoly0011s0200 Marchantia polymorpha HOM05D001672 ORTHO05D007349 9.7e-19 96.7 79 58.2
Ca_09300_v3 Cicer arietinum L. HOM05D001672 ORTHO05D007349 1.4e-17 92.8 56 80.4
SMO367G0410 Selaginella moellendorffii HOM05D001672 ORTHO05D007349 1.4e-17 92.8 76 60.5
Nn4g25606 Nelumbo nucifera HOM05D001672 ORTHO05D007349 4.5e-16 87.8 84 60.7
Migut.C00728 Erythranthe guttata HOM05D001672 ORTHO05D007349 1.0e-12 76.6 41 87.8
MD04G1193500 Malus domestica HOM05D001672 ORTHO05D007349 3.0e-12 75.1 84 52.4
AagrBONN_evm.TU.Sc2ySwM_344.4940 Anthoceros agrestis HOM05D001672 ORTHO05D007349 8.8e-12 73.6 76 53.9
Phvul.001G225200 Phaseolus vulgaris HOM05D001672 ORTHO05D007349 9.7e-11 70.1 42 83.3
CDE01G0522 Ceratophyllum demersum HOM05D001672 ORTHO05D007349 2.9e-07 58.5 42 69.0
AUR62006632 Chenopodium quinoa HOM05D001672 ORTHO05D008029 2.9e-07 58.5 44 59.1
EL10Ac4g10010 Beta vulgaris HOM05D001672 ORTHO05D008029 3.8e-07 58.2 44 59.1
AUR62000284 Chenopodium quinoa HOM05D001672 ORTHO05D008029 3.8e-07 58.2 44 59.1
Nitab4.5_0001449g0040 Nicotiana tabacum HOM05D001672 ORTHO05D008029 3.8e-07 58.2 44 59.1
Nitab4.5_0021834g0010 Nicotiana tabacum HOM05D001672 ORTHO05D008029 3.8e-07 58.2 44 59.1
Hund21839 Selenicereus undatus HOM05D001672 ORTHO05D008029 3.8e-07 58.2 44 59.1
CSS0033803 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D008029 5.0e-07 57.8 60 48.3
DCAR_030007 Daucus carota HOM05D001672 ORTHO05D008029 6.5e-07 57.4 45 57.8
Aqoxy2G04124 Aquilegia oxysepala HOM05D001672 ORTHO05D008029 8.5e-07 57.0 72 38.9
CDE07G1999 Ceratophyllum demersum HOM05D001672 ORTHO05D008029 8.5e-07 57.0 44 56.8
Duzib106G1257 Durio zibethinus HOM05D001672 ORTHO05D008029 8.5e-07 57.0 64 45.3
Thecc.05G187200 Theobroma cacao HOM05D001672 ORTHO05D008029 8.5e-07 57.0 44 56.8
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 1.1e-06 56.6 44 59.1
Eucgr.B01462 Eucalyptus grandis HOM05D001672 ORTHO05D008029 1.1e-06 56.6 54 46.3
Gohir.A08G227200 Gossypium hirsutum HOM05D001672 ORTHO05D008029 1.1e-06 56.6 44 56.8
Gohir.D08G247600 Gossypium hirsutum HOM05D001672 ORTHO05D008029 1.1e-06 56.6 44 56.8
Gorai.004G264100 Gossypium raimondii HOM05D001672 ORTHO05D008029 1.1e-06 56.6 44 56.8
arahy.Tifrunner.gnm1.ann1.322B5E Arachis hypogaea HOM05D001672 ORTHO05D008029 1.4e-06 56.2 44 56.8
arahy.Tifrunner.gnm1.ann1.5A5R3G Arachis hypogaea HOM05D001672 ORTHO05D008029 1.4e-06 56.2 44 56.8
Cfa006240 Carpinus fangiana HOM05D001672 ORTHO05D008029 1.4e-06 56.2 44 56.8
CiPaw.07G082900 Carya illinoinensis HOM05D001672 ORTHO05D008029 1.4e-06 56.2 75 38.7
Duzib150G1308 Durio zibethinus HOM05D001672 ORTHO05D008029 1.4e-06 56.2 44 54.5
CBR_g54104 Chara braunii HOM05D001672 ORTHO05D008029 1.9e-06 55.8 76 44.7
Cc09_g03960 Coffea canephora HOM05D001672 ORTHO05D008029 1.9e-06 55.8 44 56.8
Duzib177G0269 Durio zibethinus HOM05D001672 ORTHO05D008029 1.9e-06 55.8 44 56.8
AL7G45120 Arabidopsis lyrata HOM05D001672 ORTHO05D008029 2.5e-06 55.5 44 56.8
BcaC08g44326 Brassica carinata HOM05D001672 ORTHO05D008029 2.5e-06 55.5 75 40.0
A05p16360 Brassica napus HOM05D001672 ORTHO05D008029 2.5e-06 55.5 75 40.0
C06p17510 Brassica napus HOM05D001672 ORTHO05D008029 2.5e-06 55.5 75 40.0
BolC6t36945H Brassica oleracea HOM05D001672 ORTHO05D008029 2.5e-06 55.5 75 40.0
BraA05t20544Z Brassica rapa HOM05D001672 ORTHO05D008029 2.5e-06 55.5 75 40.0
Carub.0007s3185 Capsella rubella HOM05D001672 ORTHO05D008029 2.5e-06 55.5 44 56.8
Cre01.g010864 Chlamydomonas reinhardtii HOM05D001672 ORTHO05D008029 2.5e-06 55.5 73 39.7
Lj3A233G8 Lonicera japonica HOM05D001672 ORTHO05D008029 2.5e-06 55.5 45 53.3
TWI36G0167 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 2.5e-06 55.5 44 56.8
TWI36G0981 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 2.5e-06 55.5 44 56.8
CAN.G4.22 Capsicum annuum HOM05D001672 ORTHO05D008029 3.2e-06 55.1 44 54.5
Cpa.g.sc123.43 Carica papaya HOM05D001672 ORTHO05D008029 3.2e-06 55.1 44 54.5
Hma1.2p1_0831F.1_g225370 Hydrangea macrophylla HOM05D001672 ORTHO05D008029 3.2e-06 55.1 44 54.5
Lalb_Chr19g0127621 Lupinus albus HOM05D001672 ORTHO05D008029 3.2e-06 55.1 44 54.5
SGA_v2.0_scaffold122G33194 Striga asiatica HOM05D001672 ORTHO05D008029 3.2e-06 55.1 45 53.3
Aa31LG9G17900 Aethionema arabicum HOM05D001672 ORTHO05D008029 4.2e-06 54.7 44 56.8
AagrBONN_evm.TU.Sc2ySwM_368.638 Anthoceros agrestis HOM05D001672 ORTHO05D008029 4.2e-06 54.7 75 36.0
BcaB02g08040 Brassica carinata HOM05D001672 ORTHO05D008029 4.2e-06 54.7 72 40.3
CARHR216570 Cardamine hirsuta HOM05D001672 ORTHO05D008029 4.2e-06 54.7 72 40.3
Haze_04593 Corylus avellana HOM05D000399 ORTHO05D008029 4.2e-06 54.7 44 54.5
Thhalv10004205m.g Eutrema salsugineum HOM05D001672 ORTHO05D008029 4.2e-06 54.7 72 40.3
Nn7g37576 Nelumbo nucifera HOM05D001672 ORTHO05D008029 4.2e-06 54.7 44 54.5
Oeu010169.1 Olea europaea HOM05D001672 ORTHO05D008029 4.2e-06 54.7 75 38.7
Phvul.008G052200 Phaseolus vulgaris HOM05D001672 ORTHO05D008029 4.2e-06 54.7 44 52.3
Sp7g05990 Schrenkiella parvula HOM05D001672 ORTHO05D008029 4.2e-06 54.7 72 40.3
FvH4_6g00190 Fragaria vesca HOM05D001672 ORTHO05D008029 5.5e-06 54.3 44 52.3
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 5.5e-06 54.3 39 71.8
RcHm_v2.0_Chr3g0447561 Rosa chinensis HOM05D001672 ORTHO05D008029 5.5e-06 54.3 44 52.3
THA.LOC104805706 Tarenaya hassleriana HOM05D001672 ORTHO05D008029 5.5e-06 54.3 75 37.3
Actinidia31345 Actinidia chinensis HOM05D001672 ORTHO05D008029 7.2e-06 53.9 44 54.5
AT5G36170 Arabidopsis thaliana HOM05D001672 ORTHO05D008029 7.2e-06 53.9 72 40.3
CANSAT54G0429 Cannabis sativa HOM05D001672 ORTHO05D008029 7.2e-06 53.9 44 52.3
Glyma.09G248300 Glycine max HOM05D001672 ORTHO05D008029 7.2e-06 53.9 44 54.5
Mapoly0009s0190 Marchantia polymorpha HOM05D001672 ORTHO05D008029 7.2e-06 53.9 75 40.0
GSVIVG01019055001 Vitis vinifera HOM05D001672 ORTHO05D008029 7.2e-06 53.9 44 52.3
MSTRG.8200 Avicennia marina HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 54.5
Lj1g0017266 Lotus japonicus HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 54.5
MCO09G220 Micromonas commoda HOM05D001672 ORTHO05D008029 9.4e-06 53.5 89 38.2
Peaxi162Scf00619g00046 Petunia axillaris HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 52.3
Potri.008G075800 Populus trichocarpa HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 54.5
PGR031G1216 Punica granatum HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 54.5
Rhsim09G0128900 Rhododendron simsii HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 52.3
VMungo1383G0488 Vigna mungo HOM05D001672 ORTHO05D008029 9.4e-06 53.5 44 54.5


User provided reference genes

Program Settings