Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023744.1 Olea europaea HOM05D005896 ORTHO05D007250 1.2e-258 896.0 445 100.0
Migut.J00081 Erythranthe guttata HOM05D005896 ORTHO05D007250 2.1e-207 725.7 442 80.1
Atru.chr8.2358 Acer truncatum HOM05D005896 ORTHO05D007250 4.8e-207 724.5 442 78.1
Dinv35431 Davidia involucrata HOM05D005896 ORTHO05D007250 4.8e-207 724.5 445 80.0
Thecc.05G004100 Theobroma cacao HOM05D005896 ORTHO05D007250 1.0e-204 716.8 442 78.5
Cfa017090 Carpinus fangiana HOM05D005896 ORTHO05D007250 3.8e-204 714.9 445 78.2
Cc06_g00650 Coffea canephora HOM05D005896 ORTHO05D007250 2.5e-203 712.2 445 78.4
Rhsim05G0227300 Rhododendron simsii HOM05D005896 ORTHO05D007250 2.5e-203 712.2 442 78.3
FvH4_6g10330 Fragaria vesca HOM05D005896 ORTHO05D007250 4.2e-203 711.4 444 76.4
Actinidia11539 Actinidia chinensis HOM05D005896 ORTHO05D007250 9.3e-203 710.3 445 78.7
MSTRG.5530 Avicennia marina HOM05D005896 ORTHO05D007250 1.2e-202 709.9 443 78.6
RcHm_v2.0_Chr3g0461101 Rosa chinensis HOM05D005896 ORTHO05D007250 6.0e-202 707.6 444 75.5
CANSAT35G1655 Cannabis sativa HOM05D005896 ORTHO05D007250 1.1e-200 703.4 445 76.9
Sabra06G0082600 Salix brachista HOM05D005896 ORTHO05D007250 1.5e-200 703.0 445 77.5
GSVIVG01030240001 Vitis vinifera HOM05D005896 ORTHO05D007250 4.3e-200 701.4 445 76.9
QL07p033519 Quercus lobata HOM05D005896 ORTHO05D007250 9.7e-200 700.3 443 77.0
Gorai.012G119800 Gossypium raimondii HOM05D005896 ORTHO05D007250 1.6e-199 699.5 445 77.5
Gohir.D04G136000 Gossypium hirsutum HOM05D005896 ORTHO05D007250 6.3e-199 697.6 445 77.3
Peaxi162Scf00009g01011 Petunia axillaris HOM05D005896 ORTHO05D007250 1.4e-198 696.4 443 75.6
Sed0010587 Sechium edule HOM05D005896 ORTHO05D007250 1.8e-198 696.0 443 76.1
CAN.G738.1 Capsicum annuum HOM05D005896 ORTHO05D007250 4.1e-198 694.9 445 75.5
Gohir.A04G096200 Gossypium hirsutum HOM05D005896 ORTHO05D007250 5.3e-198 694.5 445 76.9
Potri.006G106000 Populus trichocarpa HOM05D005896 ORTHO05D007250 5.3e-198 694.5 445 77.1
CiPaw.09G216900 Carya illinoinensis HOM05D005896 ORTHO05D007250 2.0e-197 692.6 445 76.2
FAN02G1083 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.0e-197 692.6 454 73.8
Manes.09G113900 Manihot esculenta HOM05D005896 ORTHO05D007250 2.0e-197 692.6 443 76.7
FAN05G0609 Fragaria x ananassa HOM05D005896 ORTHO05D007250 7.7e-197 690.6 454 73.8
Lalb_Chr01g0023511 Lupinus albus HOM05D005896 ORTHO05D007250 7.7e-197 690.6 445 73.9
Sopen10g034850 Solanum pennellii HOM05D005896 ORTHO05D007250 1.0e-196 690.3 445 75.1
FAN14G5183 Fragaria x ananassa HOM05D005896 ORTHO05D007250 1.3e-196 689.9 454 74.2
Solyc10g085400.3 Solanum lycopersicum HOM05D005896 ORTHO05D007250 1.3e-196 689.9 445 74.8
Glyma.09G279500 Glycine max HOM05D005896 ORTHO05D007250 1.7e-196 689.5 445 74.2
TWI77G0262 Tripterygium wilfordii HOM05D005896 ORTHO05D007250 3.8e-196 688.3 442 75.8
Medtr7g071990 Medicago truncatula HOM05D005896 ORTHO05D007250 5.0e-196 688.0 445 74.6
MD12G1182400 Malus domestica HOM05D005896 ORTHO05D007250 8.5e-196 687.2 444 74.1
TPR.G18656 Trifolium pratense HOM05D005896 ORTHO05D007250 1.4e-195 686.4 445 74.4
vmacro20337 Vaccinium macrocarpon HOM05D005896 ORTHO05D007250 1.9e-195 686.0 464 73.3
MELO3C009120.2 Cucumis melo HOM05D005896 ORTHO05D007250 3.2e-195 685.3 445 74.6
Glyma.18G209600 Glycine max HOM05D005896 ORTHO05D007250 9.4e-195 683.7 445 73.5
FAN05G5239 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.7e-194 682.2 480 70.0
Prupe.6G287100 Prunus persica HOM05D005896 ORTHO05D007250 2.7e-194 682.2 445 74.4
arahy.Tifrunner.gnm1.ann1.2FTV5P Arachis hypogaea HOM05D005896 ORTHO05D007250 6.1e-194 681.0 445 74.8
arahy.Tifrunner.gnm1.ann1.Q3Q3XE Arachis hypogaea HOM05D005896 ORTHO05D007250 7.9e-194 680.6 445 74.8
VMungo1383G2905 Vigna mungo HOM05D005896 ORTHO05D007250 7.9e-194 680.6 445 73.7
CsaV3_3G033280 Cucumis sativus L. HOM05D005896 ORTHO05D007250 1.0e-193 680.2 445 74.2
Lj1g0024727 Lotus japonicus HOM05D005896 ORTHO05D007250 2.0e-192 676.0 445 74.2
Ca_26097_v3 Cicer arietinum L. HOM05D005896 ORTHO05D007250 2.5e-192 675.6 445 73.5
Nn2g11051 Nelumbo nucifera HOM05D005896 ORTHO05D007250 3.3e-192 675.2 442 74.2
Phvul.008G089700 Phaseolus vulgaris HOM05D005896 ORTHO05D007250 7.4e-192 674.1 445 72.8
MD04G1168900 Malus domestica HOM05D005896 ORTHO05D007250 2.8e-191 672.2 444 72.7
Psat3g120600 Pisum sativum HOM05D005896 ORTHO05D007250 4.8e-191 671.4 445 73.0
Aqoxy2G00762 Aquilegia oxysepala HOM05D005896 ORTHO05D007250 1.8e-190 669.5 443 74.7
ECA236G3210 Erigeron canadensis HOM05D005896 ORTHO05D007250 1.8e-190 669.5 442 74.4
PSO339G6300 Papaver somniferum HOM05D005896 ORTHO05D007250 2.4e-190 669.1 443 72.9
HanXRQChr12g0363731 Helianthus annuus HOM05D005896 ORTHO05D007250 6.9e-190 667.5 442 73.5
HanXRQChr16g0509701 Helianthus annuus HOM05D005896 ORTHO05D007250 6.9e-190 667.5 442 73.5
SalBow5G4224 Salvia bowleyana HOM05D005896 ORTHO05D007250 6.9e-190 667.5 481 72.8
CSS0019926 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 1.2e-189 666.8 445 75.1
CSS0029745 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 1.3e-188 663.3 445 74.8
ClCG10G022550 Citrullus lanatus HOM05D005896 ORTHO05D007250 1.9e-187 659.4 524 63.9
Sc02g0000680 Simmondsia chinensis HOM05D005896 ORTHO05D007250 3.9e-185 651.7 443 71.8
Lsat_1_v5_gn_8_105740 Lactuca sativa HOM05D005896 ORTHO05D007250 6.7e-185 651.0 447 71.8
ATR0681G081 Amborella trichopoda HOM05D005896 ORTHO05D007250 1.5e-184 649.8 445 71.9
PGSC0003DMG400011105 Solanum tuberosum HOM05D005896 ORTHO05D007250 9.7e-184 647.1 412 76.0
Lj2A64G51 Lonicera japonica HOM05D005896 ORTHO05D007250 8.2e-183 644.0 449 71.9
Nitab4.5_0004057g0040 Nicotiana tabacum HOM05D005896 ORTHO05D007250 5.3e-182 641.3 422 73.7
Eucgr.A00643 Eucalyptus grandis HOM05D005896 ORTHO05D007250 1.2e-181 640.2 421 73.9
Haze_21109 Corylus avellana HOM05D005896 ORTHO05D007250 1.5e-181 639.8 428 73.8
THA.LOC104823308 Tarenaya hassleriana HOM05D005896 ORTHO05D007250 1.4e-177 626.7 442 69.2
AUR62006318 Chenopodium quinoa HOM05D005896 ORTHO05D007250 2.3e-177 625.9 505 64.6
FAN14G5591 Fragaria x ananassa HOM05D005896 ORTHO05D007250 1.1e-174 617.1 454 68.1
HPP92_013852 Vanilla planifolia HOM05D005896 ORTHO05D007250 3.1e-174 615.5 442 67.4
Thhalv10020004m.g Eutrema salsugineum HOM05D005896 ORTHO05D007250 2.6e-173 612.5 442 67.0
FAN09G0048 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.6e-173 612.5 445 68.8
AL3G19830 Arabidopsis lyrata HOM05D005896 ORTHO05D007250 3.5e-173 612.1 447 67.3
BcaC01g04196 Brassica carinata HOM05D005896 ORTHO05D007250 5.0e-172 608.2 442 67.0
AT3G08840 Arabidopsis thaliana HOM05D005896 ORTHO05D007250 8.5e-172 607.4 445 66.5
BcaB04g18571 Brassica carinata HOM05D005896 ORTHO05D007250 2.5e-171 605.9 443 66.8
Os07g0691200 Oryza sativa ssp. japonica HOM05D005896 ORTHO05D007250 1.6e-170 603.2 443 66.6
TAR623G1464 Trochodendron aralioides HOM05D005896 ORTHO05D007250 4.7e-170 601.7 471 65.2
Carub.0003s0795 Capsella rubella HOM05D005896 ORTHO05D007250 6.1e-170 601.3 445 65.6
CARHR083150 Cardamine hirsuta HOM05D005896 ORTHO05D007250 6.1e-170 601.3 442 66.1
BolC3t16668H Brassica oleracea HOM05D005896 ORTHO05D007250 8.0e-170 600.9 442 66.5
BraA03t12806Z Brassica rapa HOM05D005896 ORTHO05D007250 1.0e-169 600.5 442 66.3
BcaC09g49362 Brassica carinata HOM05D005896 ORTHO05D007250 1.5e-168 596.7 442 65.4
A03p36350 Brassica napus HOM05D005896 ORTHO05D007250 1.5e-168 596.7 442 66.3
BcaB04g20289 Brassica carinata HOM05D005896 ORTHO05D007250 3.7e-167 592.0 442 64.9
C01p37440 Brassica napus HOM05D005896 ORTHO05D007250 1.1e-166 590.5 443 65.2
BolC1t03711H Brassica oleracea HOM05D005896 ORTHO05D007250 1.6e-165 586.6 450 64.0
A01p29640 Brassica napus HOM05D005896 ORTHO05D007250 2.7e-165 585.9 442 64.3
HPP92_013866 Vanilla planifolia HOM05D005896 ORTHO05D007250 2.7e-165 585.9 428 66.4
Aa31LG5G18810 Aethionema arabicum HOM05D005896 ORTHO05D007250 2.9e-164 582.4 419 67.3
BraA01t03093Z Brassica rapa HOM05D005896 ORTHO05D007250 9.4e-163 577.4 454 63.0
SEGI_19702 Sequoiadendron giganteum HOM05D005896 ORTHO05D007250 9.4e-163 577.4 443 63.2
Ciclev10011082m.g Citrus clementina HOM05D005896 ORTHO05D007250 3.6e-162 575.5 381 72.7
Zm00001eb111890 Zea mays HOM05D005896 ORTHO05D007250 3.6e-162 575.5 428 64.7
C03p43970 Brassica napus HOM05D005896 ORTHO05D007250 6.1e-162 574.7 420 66.7
Nitab4.5_0001703g0070 Nicotiana tabacum HOM05D005896 ORTHO05D007250 5.4e-158 561.6 422 66.4
COL.COLO4_14429 Corchorus olitorius HOM05D005896 ORTHO05D007250 1.6e-149 533.5 443 63.7
DCAR_028898 Daucus carota HOM05D005896 ORTHO05D007250 2.2e-143 513.1 442 60.2
CAN.G1288.7 Capsicum annuum HOM05D005896 ORTHO05D007250 5.0e-140 501.9 360 69.2
SMO228G0083 Selaginella moellendorffii HOM05D005896 ORTHO05D007250 6.0e-133 478.4 448 52.5
Mapoly0266s0003 Marchantia polymorpha HOM05D005896 ORTHO05D007250 3.7e-127 459.1 458 51.1
Hma1.2p1_2300F.1_g319240 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 4.7e-122 442.2 268 80.2
PRCOL_00001217 Prasinoderma coloniale HOM05D005896 ORTHO05D007250 1.5e-99 367.5 458 46.9
A03p36380 Brassica napus HOM05D005896 ORTHO05D007250 1.4e-94 350.9 276 62.3
Hma1.2p1_3169F.1_g333550 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 1.4e-94 350.9 338 58.0
AUR62026359 Chenopodium quinoa HOM05D005896 ORTHO05D007250 1.3e-87 327.8 450 44.4
Hund03771 Selenicereus undatus HOM05D005896 ORTHO05D007250 9.0e-81 305.1 238 62.2
SEGI_37805 Sequoiadendron giganteum HOM05D005896 ORTHO05D007250 8.8e-68 261.9 172 72.1
CBR_g38233 Chara braunii HOM05D005896 ORTHO05D007250 1.6e-61 241.1 249 52.2
Actinidia26603 Actinidia chinensis HOM05D005896 ORTHO05D007250 8.0e-61 238.8 177 68.9
Pp3c18_18940 Physcomitrium patens HOM05D005896 ORTHO05D007250 7.0e-57 225.7 262 43.9
Hma1.2p1_2300F.1_g319233 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 7.7e-48 195.7 132 71.2
Hma1.2p1_2300F.1_g319236 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 6.3e-42 176.0 132 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2825 Anthoceros agrestis HOM05D005896 ORTHO05D007250 1.4e-41 174.9 178 50.6
Solyc09g031528.1 Solanum lycopersicum HOM05D005896 ORTHO05D007250 8.0e-37 159.1 98 79.6
CiPaw.01G264800 Carya illinoinensis HOM05D001401 ORTHO05D002222 6.2e-21 106.3 82 62.2
Cre15.g635650 Chlamydomonas reinhardtii HOM05D005896 ORTHO05D007250 8.1e-21 105.9 405 22.5
Solyc09g015130.4 Solanum lycopersicum HOM05D005896 ORTHO05D007250 3.4e-19 100.5 58 82.8
COL.COLO4_03233 Corchorus olitorius HOM05D005896 ORTHO05D007250 2.7e-08 64.3 111 37.8
MBI15_g29358_MAGBIO Magnolia biondii HOM05D005896 ORTHO05D007250 3.5e-08 63.9 44 65.9
Solyc07g032788.1 Solanum lycopersicum HOM05D005896 ORTHO05D007250 3.9e-07 60.5 37 75.7
TAR381G1729 Trochodendron aralioides HOM05D000406 ORTHO05D002714 1.1e-06 58.9 31 80.6
CBR_g38232 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-06 58.2 152 30.3
Oeu038710.1 Olea europaea HOM05D002309 ORTHO05D002869 2.5e-06 57.8 75 52.0


User provided reference genes

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