Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023599.1 Olea europaea HOM05D005013 ORTHO05D006005 1.8e-84 315.8 157 100.0
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 9.3e-65 250.4 157 74.5
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 2.7e-48 195.7 165 60.0
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 2.7e-48 195.7 167 61.1
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 7.9e-48 194.1 166 60.8
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 1.4e-47 193.4 130 68.5
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 1.4e-47 193.4 133 70.7
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 1.4e-47 193.4 133 70.7
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 1.8e-47 193.0 168 60.7
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 2.3e-47 192.6 168 61.3
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.3e-47 192.6 170 60.0
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 2.3e-47 192.6 170 60.0
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 2.3e-47 192.6 171 57.3
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 3.0e-47 192.2 168 60.7
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 5.1e-47 191.4 172 58.1
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 5.1e-47 191.4 132 67.4
TAR623G0538 Trochodendron aralioides HOM05D005013 ORTHO05D006005 8.8e-47 190.7 170 57.6
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 1.1e-46 190.3 167 58.1
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 2.0e-46 189.5 171 58.5
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 3.3e-46 188.7 170 58.2
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 4.4e-46 188.3 163 58.3
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 4.4e-46 188.3 172 57.6
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 4.4e-46 188.3 170 58.8
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 5.7e-46 188.0 171 57.9
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 5.7e-46 188.0 171 57.9
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 7.4e-46 187.6 163 57.7
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 7.4e-46 187.6 170 57.1
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 7.4e-46 187.6 168 58.9
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 9.7e-46 187.2 168 58.3
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 9.7e-46 187.2 166 59.0
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 1.3e-45 186.8 168 59.5
Cpa.g.sc109.3 Carica papaya HOM05D005013 ORTHO05D006005 2.2e-45 186.0 170 57.6
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 2.2e-45 186.0 162 59.9
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 2.2e-45 186.0 169 56.8
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 2.8e-45 185.7 169 56.8
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 2.8e-45 185.7 155 59.4
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 4.8e-45 184.9 172 55.8
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 6.3e-45 184.5 142 63.4
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 1.1e-44 183.7 168 55.4
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 1.4e-44 183.3 152 57.9
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 1.4e-44 183.3 162 58.0
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 2.4e-44 182.6 132 65.2
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 3.1e-44 182.2 128 64.8
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 4.1e-44 181.8 165 58.8
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 1.2e-43 180.3 129 66.7
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 2.0e-43 179.5 168 57.1
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 2.6e-43 179.1 126 65.1
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 5.9e-43 177.9 167 56.9
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 7.7e-43 177.6 167 56.9
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 7.7e-43 177.6 171 56.1
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 1.0e-42 177.2 171 55.6
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 2.9e-42 175.6 123 66.7
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 2.9e-42 175.6 165 57.6
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 5.0e-42 174.9 164 54.3
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 8.5e-42 174.1 170 54.7
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 1.9e-41 172.9 170 52.4
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 1.9e-41 172.9 144 59.0
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 1.9e-41 172.9 144 59.0
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.9e-41 172.9 167 56.3
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 1.9e-41 172.9 169 55.0
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.9e-41 172.9 166 56.6
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 2.5e-41 172.6 170 54.7
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 5.5e-41 171.4 170 55.9
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 5.5e-41 171.4 170 55.9
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 5.5e-41 171.4 122 65.6
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 5.5e-41 171.4 170 54.7
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 5.5e-41 171.4 120 66.7
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 7.2e-41 171.0 170 54.1
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 7.2e-41 171.0 170 55.3
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 1.6e-40 169.9 110 69.1
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 1.6e-40 169.9 170 50.0
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 2.1e-40 169.5 169 55.0
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 2.1e-40 169.5 171 53.2
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.7e-40 168.3 170 55.3
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 6.1e-40 167.9 169 53.8
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 6.1e-40 167.9 153 54.9
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 7.9e-40 167.5 171 50.3
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.0e-39 167.2 169 55.0
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 1.8e-39 166.4 168 53.6
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 8.8e-39 164.1 170 52.9
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 1.1e-38 163.7 137 56.2
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 3.3e-38 162.2 128 60.2
HPP92_015185 Vanilla planifolia HOM05D005013 ORTHO05D006005 3.7e-37 158.7 170 48.2
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 4.8e-37 158.3 169 47.9
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 2.4e-36 156.0 113 66.4
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 3.1e-36 155.6 128 58.6
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 4.1e-36 155.2 170 52.4
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 7.0e-36 154.5 168 48.2
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 1.6e-35 153.3 97 72.2
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.6e-35 153.3 172 45.9
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.6e-35 153.3 172 45.9
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 2.6e-35 152.5 158 49.4
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 3.5e-35 152.1 170 48.8
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 3.5e-35 152.1 168 50.6
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 3.5e-35 152.1 128 57.0
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 4.5e-35 151.8 171 51.5
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 4.5e-35 151.8 145 53.8
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 5.9e-35 151.4 172 45.3
Actinidia21716 Actinidia chinensis HOM05D005013 ORTHO05D006005 7.7e-35 151.0 97 71.1
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 1.7e-34 149.8 99 69.7
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 2.2e-34 149.4 170 48.8
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 2.9e-34 149.1 166 51.2
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 6.5e-34 147.9 173 50.9
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 1.1e-33 147.1 159 49.1
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 5.5e-33 144.8 172 44.2
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 1.2e-32 143.7 173 49.7
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 2.1e-32 142.9 169 46.7
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.4e-31 140.2 169 46.2
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 5.2e-31 138.3 121 52.1
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 2.0e-30 136.3 121 52.1
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 6.3e-29 131.3 121 51.2
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 5.0e-26 121.7 148 42.6
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 1.5e-22 110.2 95 55.8
Mapoly0123s0029 Marchantia polymorpha HOM05D005013 ORTHO05D006005 4.4e-22 108.6 113 46.0
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 5.7e-22 108.2 74 63.5
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.3e-21 107.1 157 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 2.2e-21 106.3 138 41.3
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 1.4e-20 103.6 119 42.9
CDE06G0689 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 1.6e-19 100.1 121 43.8
Nn2g13410 Nelumbo nucifera HOM05D005013 ORTHO05D006005 1.6e-19 100.1 120 49.2
SMO116G0383 Selaginella moellendorffii HOM05D005013 ORTHO05D006005 1.6e-19 100.1 125 43.2
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 1.3e-18 97.1 75 56.0
Lj5C53T3 Lonicera japonica HOM05D005013 ORTHO05D006005 2.3e-18 96.3 123 42.3
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 3.7e-13 79.0 120 40.0
CAN.G1143.9 Capsicum annuum HOM05D000602 ORTHO05D001147 5.0e-10 68.6 132 34.1
SEGI_39677 Sequoiadendron giganteum HOM05D050634 ORTHO05D006005 8.6e-10 67.8 91 45.1
vmacro04324 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 3.3e-09 65.9 122 36.9
CAN.G1143.11 Capsicum annuum HOM05D005013 ORTHO05D115532 9.5e-09 64.3 42 73.8
Migut.I00890 Erythranthe guttata HOM05D005013 ORTHO05D006005 1.4e-07 60.5 89 32.6


User provided reference genes

Program Settings