Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023461.1 Olea europaea HOM05D003366 ORTHO05D004045 2.5e-47 191.8 99 100.0
Oeu045495.1 Olea europaea HOM05D003366 ORTHO05D004045 1.4e-45 186.0 99 97.0
Peaxi162Scf00089g01131 Petunia axillaris HOM05D003366 ORTHO05D004045 1.2e-41 172.9 97 88.7
MSTRG.9698 Avicennia marina HOM05D003366 ORTHO05D004045 2.7e-41 171.8 97 86.6
Nitab4.5_0000025g0230 Nicotiana tabacum HOM05D003366 ORTHO05D004045 3.5e-41 171.4 97 87.6
Solyc03g111850.3 Solanum lycopersicum HOM05D003366 ORTHO05D004045 5.9e-41 170.6 97 87.6
Sopen03g030970 Solanum pennellii HOM05D003366 ORTHO05D004045 5.9e-41 170.6 97 87.6
Hma1.2p1_0629F.1_g192240 Hydrangea macrophylla HOM05D003366 ORTHO05D004045 7.7e-41 170.2 99 86.9
ECA234G0856 Erigeron canadensis HOM05D003366 ORTHO05D004045 1.0e-40 169.9 97 84.5
Hma1.2p1_0599F.1_g187060 Hydrangea macrophylla HOM05D003366 ORTHO05D004045 1.0e-40 169.9 99 87.9
Lj8A136T94 Lonicera japonica HOM05D003366 ORTHO05D004045 1.3e-40 169.5 97 86.6
PGSC0003DMG400015153 Solanum tuberosum HOM05D003366 ORTHO05D004045 1.3e-40 169.5 97 86.6
Migut.D02018 Erythranthe guttata HOM05D003366 ORTHO05D004045 5.0e-40 167.5 97 86.6
Lsat_1_v5_gn_7_97420 Lactuca sativa HOM05D003366 ORTHO05D004045 6.5e-40 167.2 97 84.5
THA.LOC104819033 Tarenaya hassleriana HOM05D003366 ORTHO05D004045 8.6e-40 166.8 99 84.8
CAN.G126.88 Capsicum annuum HOM05D003366 ORTHO05D004045 1.1e-39 166.4 97 84.5
Lsat_1_v5_gn_5_122300 Lactuca sativa HOM05D003366 ORTHO05D004045 1.1e-39 166.4 97 83.5
HanXRQChr10g0306821 Helianthus annuus HOM05D003366 ORTHO05D004045 1.5e-39 166.0 97 82.5
Nn6g34363 Nelumbo nucifera HOM05D003366 ORTHO05D004045 1.5e-39 166.0 97 86.6
TWI75G1649 Tripterygium wilfordii HOM05D003366 ORTHO05D004045 1.9e-39 165.6 97 84.5
CSS0040673 Camellia sinensis var. sinensis HOM05D003366 ORTHO05D004045 3.2e-39 164.9 97 83.5
Migut.O00185 Erythranthe guttata HOM05D003366 ORTHO05D004045 3.2e-39 164.9 97 82.5
Nn1g03151 Nelumbo nucifera HOM05D003366 ORTHO05D004045 5.5e-39 164.1 97 85.6
ClCG02G002960 Citrullus lanatus HOM05D003366 ORTHO05D004045 9.5e-39 163.3 99 80.8
Ciclev10015498m.g Citrus clementina HOM05D003366 ORTHO05D004045 9.5e-39 163.3 99 84.8
Aqoxy3G01284 Aquilegia oxysepala HOM05D003366 ORTHO05D004045 1.6e-38 162.5 99 84.8
Duzib138G0143 Durio zibethinus HOM05D003366 ORTHO05D004045 1.6e-38 162.5 99 82.8
Sed0016337 Sechium edule HOM05D003366 ORTHO05D004045 1.6e-38 162.5 99 79.8
Peaxi162Scf00801g00730 Petunia axillaris HOM05D003366 ORTHO05D004045 2.1e-38 162.2 97 81.4
SalBow5G1323 Salvia bowleyana HOM05D003366 ORTHO05D004045 2.1e-38 162.2 99 77.8
SalBow5G5386 Salvia bowleyana HOM05D003366 ORTHO05D004045 2.1e-38 162.2 99 77.8
GSVIVG01030116001 Vitis vinifera HOM05D003366 ORTHO05D004045 2.1e-38 162.2 99 82.8
COL.COLO4_19639 Corchorus olitorius HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 82.8
MELO3C024189.2 Cucumis melo HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 79.8
CsaV3_7G002440 Cucumis sativus L. HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 79.8
DCAR_019671 Daucus carota HOM05D003366 ORTHO05D004045 2.8e-38 161.8 97 81.4
Manes.12G063602 Manihot esculenta HOM05D003366 ORTHO05D004045 2.8e-38 161.8 97 83.5
PGR031G3285 Punica granatum HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 81.8
TWI18G0380 Tripterygium wilfordii HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 83.8
TAR626G1358 Trochodendron aralioides HOM05D003366 ORTHO05D004045 2.8e-38 161.8 99 82.8
Cpa.g.sc136.37 Carica papaya HOM05D003366 ORTHO05D004045 3.6e-38 161.4 99 80.8
Cc04_g11110 Coffea canephora HOM05D003366 ORTHO05D004045 3.6e-38 161.4 97 83.5
Nitab4.5_0000510g0170 Nicotiana tabacum HOM05D003366 ORTHO05D004045 3.6e-38 161.4 92 87.0
Nitab4.5_0003542g0080 Nicotiana tabacum HOM05D003366 ORTHO05D004045 3.6e-38 161.4 92 87.0
Actinidia18830 Actinidia chinensis HOM05D003366 ORTHO05D004045 4.7e-38 161.0 99 81.8
MD17G1118200 Malus domestica HOM05D003366 ORTHO05D004045 4.7e-38 161.0 99 81.8
Sabra14G0128900 Salix brachista HOM05D003366 ORTHO05D004045 4.7e-38 161.0 99 81.8
Gohir.D07G170900 Gossypium hirsutum HOM05D003366 ORTHO05D004045 6.1e-38 160.6 99 81.8
unitig_21.g20442 Utricularia gibba HOM05D003366 ORTHO05D004045 6.1e-38 160.6 97 82.5
Cfa014212 Carpinus fangiana HOM05D003366 ORTHO05D004045 1.0e-37 159.8 97 82.5
MD09G1129300 Malus domestica HOM05D003366 ORTHO05D004045 1.0e-37 159.8 99 81.8
TWI36G0699 Tripterygium wilfordii HOM05D003366 ORTHO05D004045 1.4e-37 159.5 99 81.8
Gorai.001G191000 Gossypium raimondii HOM05D003366 ORTHO05D004045 1.8e-37 159.1 99 80.8
HanXRQChr11g0329411 Helianthus annuus HOM05D003366 ORTHO05D004045 1.8e-37 159.1 97 82.5
Potri.014G169100 Populus trichocarpa HOM05D003366 ORTHO05D004045 1.8e-37 159.1 99 81.8
EL10Ac2g04021 Beta vulgaris HOM05D003366 ORTHO05D004045 2.3e-37 158.7 99 81.8
MBI14_g24035_MAGBIO Magnolia biondii HOM05D003366 ORTHO05D004045 2.3e-37 158.7 98 79.6
CiPaw.03G282800 Carya illinoinensis HOM05D003366 ORTHO05D004045 3.0e-37 158.3 97 80.4
Eucgr.A01368 Eucalyptus grandis HOM05D003366 ORTHO05D004045 3.0e-37 158.3 99 81.8
vmacro09477 Vaccinium macrocarpon HOM05D003366 ORTHO05D004045 3.0e-37 158.3 99 80.8
Gohir.A11G148200 Gossypium hirsutum HOM05D003366 ORTHO05D004045 4.0e-37 157.9 99 81.8
Gohir.A07G163900 Gossypium hirsutum HOM05D003366 ORTHO05D004045 5.2e-37 157.5 99 80.8
FAN05G5269 Fragaria x ananassa HOM05D003366 ORTHO05D004045 6.8e-37 157.1 99 79.8
FAN09G3658 Fragaria x ananassa HOM05D004224 ORTHO05D006437 6.8e-37 157.1 99 79.8
arahy.Tifrunner.gnm1.ann1.0B41PU Arachis hypogaea HOM05D003366 ORTHO05D004045 8.8e-37 156.8 97 79.4
arahy.Tifrunner.gnm1.ann1.8VJ98X Arachis hypogaea HOM05D003366 ORTHO05D004045 8.8e-37 156.8 97 79.4
FAN02G0729 Fragaria x ananassa HOM05D003366 ORTHO05D004045 8.8e-37 156.8 99 79.8
FAN10G3881 Fragaria x ananassa HOM05D003366 ORTHO05D004045 8.8e-37 156.8 99 79.8
FAN14G5851 Fragaria x ananassa HOM05D003366 ORTHO05D004045 8.8e-37 156.8 99 79.8
Gorai.007G165300 Gossypium raimondii HOM05D003366 ORTHO05D004045 8.8e-37 156.8 99 80.8
ATR0751G192 Amborella trichopoda HOM05D003366 ORTHO05D004045 1.2e-36 156.4 99 78.8
arahy.Tifrunner.gnm1.ann1.65EY62 Arachis hypogaea HOM05D003366 ORTHO05D004045 1.2e-36 156.4 97 79.4
arahy.Tifrunner.gnm1.ann1.SQZ1L0 Arachis hypogaea HOM05D003366 ORTHO05D004045 1.2e-36 156.4 97 79.4
PSO210G6970 Papaver somniferum HOM05D003366 ORTHO05D004045 1.2e-36 156.4 97 79.4
CDE02G1598 Ceratophyllum demersum HOM05D003366 ORTHO05D004045 1.5e-36 156.0 97 81.4
Gohir.D11G155000 Gossypium hirsutum HOM05D003366 ORTHO05D004045 1.5e-36 156.0 99 80.8
Lj1A799T34 Lonicera japonica HOM05D003366 ORTHO05D004045 1.5e-36 156.0 97 81.4
Hund03398 Selenicereus undatus HOM05D003366 ORTHO05D004045 1.5e-36 156.0 99 81.8
Glyma.02G259000 Glycine max HOM05D003366 ORTHO05D004045 2.6e-36 155.2 97 78.4
QL04p067730 Quercus lobata HOM05D003366 ORTHO05D004045 2.6e-36 155.2 98 77.6
LjContig00357g0014369 Lotus japonicus HOM05D003366 ORTHO05D004045 3.4e-36 154.8 97 78.4
PSO675G3120 Papaver somniferum HOM05D003366 ORTHO05D004045 3.4e-36 154.8 97 81.4
SGA_v2.0_scaffold25G10778 Striga asiatica HOM05D003366 ORTHO05D004045 4.4e-36 154.5 92 82.6
Thecc.01G197700 Theobroma cacao HOM05D003366 ORTHO05D004045 4.4e-36 154.5 99 78.8
TAR629G0562 Trochodendron aralioides HOM05D003366 ORTHO05D004045 4.4e-36 154.5 96 81.2
CARHR184070 Cardamine hirsuta HOM05D003366 ORTHO05D004045 5.7e-36 154.1 97 76.3
Thhalv10004384m.g Eutrema salsugineum HOM05D003366 ORTHO05D004045 9.8e-36 153.3 97 77.3
Ah.16g105750 Amaranthus hybridus HOM05D003366 ORTHO05D004045 1.3e-35 152.9 99 78.8
Thecc.01G198100 Theobroma cacao HOM05D003366 ORTHO05D004045 1.3e-35 152.9 99 77.8
TPR.G20196 Trifolium pratense HOM05D003366 ORTHO05D004045 1.3e-35 152.9 98 76.5
HPP92_022822 Vanilla planifolia HOM05D003366 ORTHO05D004045 1.3e-35 152.9 98 75.5
Aqoxy1G04276 Aquilegia oxysepala HOM05D003366 ORTHO05D004045 1.7e-35 152.5 97 80.4
Glyma.14G053300 Glycine max HOM05D003366 ORTHO05D004045 1.7e-35 152.5 97 77.3
Medtr5g084030 Medicago truncatula HOM05D003366 ORTHO05D004045 1.7e-35 152.5 98 76.5
BcaC06g30818 Brassica carinata HOM05D003366 ORTHO05D004045 2.2e-35 152.1 97 76.3
AUR62039696 Chenopodium quinoa HOM05D003366 ORTHO05D004045 2.2e-35 152.1 99 78.8
PSO541G3149 Papaver somniferum HOM05D003366 ORTHO05D004045 2.2e-35 152.1 97 80.4
Prupe.3G196200 Prunus persica HOM05D003366 ORTHO05D004045 2.2e-35 152.1 98 77.6
Hund13735 Selenicereus undatus HOM05D003366 ORTHO05D004045 2.2e-35 152.1 99 78.8
Ca_06031_v3 Cicer arietinum L. HOM05D003366 ORTHO05D004045 2.8e-35 151.8 98 76.5
Sp2g18590 Schrenkiella parvula HOM05D003366 ORTHO05D004045 2.8e-35 151.8 97 76.3
Sc21g0000490 Simmondsia chinensis HOM05D003366 ORTHO05D004045 2.8e-35 151.8 97 80.4
AUR62008962 Chenopodium quinoa HOM05D003366 ORTHO05D004045 3.7e-35 151.4 97 79.4
PSO210G3015 Papaver somniferum HOM05D003366 ORTHO05D004045 3.7e-35 151.4 97 77.3
AUR62014541 Chenopodium quinoa HOM05D003366 ORTHO05D004045 4.9e-35 151.0 97 79.4
Phvul.008G218200 Phaseolus vulgaris HOM05D003366 ORTHO05D004045 4.9e-35 151.0 98 76.5
Psat2g028840 Pisum sativum HOM05D003366 ORTHO05D004045 4.9e-35 151.0 98 75.5
AL8G20910 Arabidopsis lyrata HOM05D003366 ORTHO05D004045 6.3e-35 150.6 97 75.3
A06p39320 Brassica napus HOM05D003366 ORTHO05D004045 6.3e-35 150.6 97 75.3
C07p38950 Brassica napus HOM05D003366 ORTHO05D004045 6.3e-35 150.6 97 75.3
BraA06t26847Z Brassica rapa HOM05D003366 ORTHO05D004045 6.3e-35 150.6 97 75.3
Os04g0467700 Oryza sativa ssp. japonica HOM05D003366 ORTHO05D004045 6.3e-35 150.6 97 76.3
RcHm_v2.0_Chr5g0011911 Rosa chinensis HOM05D003366 ORTHO05D004045 6.3e-35 150.6 98 76.5
BcaC01g03208 Brassica carinata HOM05D003366 ORTHO05D004045 8.3e-35 150.2 97 79.4
AT5G48220 Arabidopsis thaliana HOM05D003366 ORTHO05D004045 1.1e-34 149.8 97 74.2
CANSAT64G2473 Cannabis sativa HOM05D003366 ORTHO05D004045 1.1e-34 149.8 99 76.8
CARHR102260 Cardamine hirsuta HOM05D003366 ORTHO05D004045 1.1e-34 149.8 97 78.4
Rhsim04G0030100 Rhododendron simsii HOM05D003366 ORTHO05D004045 1.1e-34 149.8 108 71.3
Aa31sc202G30 Aethionema arabicum HOM05D003366 ORTHO05D004045 1.4e-34 149.4 97 77.3
BolC3t17760H Brassica oleracea HOM05D003366 ORTHO05D004045 1.4e-34 149.4 97 78.4
CDE02G1466 Ceratophyllum demersum HOM05D003366 ORTHO05D004045 1.4e-34 149.4 97 78.4
AUR62009285 Chenopodium quinoa HOM05D003366 ORTHO05D004045 1.4e-34 149.4 99 77.8
Sp3g23210 Schrenkiella parvula HOM05D003366 ORTHO05D004045 1.4e-34 149.4 97 77.3
VMungo0647G1799 Vigna mungo HOM05D003366 ORTHO05D004045 1.4e-34 149.4 98 75.5
A03p44300 Brassica napus HOM05D003366 ORTHO05D004045 1.8e-34 149.1 97 78.4
BraA03t13559Z Brassica rapa HOM05D003366 ORTHO05D004045 1.8e-34 149.1 97 78.4
Carub.0008s0779 Capsella rubella HOM05D003366 ORTHO05D004045 1.8e-34 149.1 97 74.2
BolC7t44416H Brassica oleracea HOM05D003366 ORTHO05D004045 2.4e-34 148.7 97 74.2
Lalb_Chr10g0105441 Lupinus albus HOM05D003366 ORTHO05D004045 2.4e-34 148.7 96 77.1
RcHm_v2.0_Chr2g0155751 Rosa chinensis HOM05D003366 ORTHO05D004045 3.1e-34 148.3 99 73.7
Lalb_Chr04g0250271 Lupinus albus HOM05D003366 ORTHO05D004045 4.1e-34 147.9 96 76.0
Psat1g185040 Pisum sativum HOM05D003366 ORTHO05D004045 4.1e-34 147.9 98 72.4
Zm00001eb424560 Zea mays HOM05D003366 ORTHO05D004045 4.1e-34 147.9 97 74.2
Carub.0003s2605 Capsella rubella HOM05D003366 ORTHO05D004045 7.0e-34 147.1 97 77.3
AT2G04400 Arabidopsis thaliana HOM05D003366 ORTHO05D004045 1.2e-33 146.4 97 76.3
C03p54710 Brassica napus HOM05D003366 ORTHO05D004045 1.2e-33 146.4 97 77.3
BcaB08g34466 Brassica carinata HOM05D003366 ORTHO05D004045 2.7e-33 145.2 97 76.3
AL3G42040 Arabidopsis lyrata HOM05D003366 ORTHO05D004045 3.5e-33 144.8 97 75.3
Thhalv10002557m.g Eutrema salsugineum HOM05D003366 ORTHO05D004045 4.5e-33 144.4 97 77.3
THA.LOC104808841 Tarenaya hassleriana HOM05D003366 ORTHO05D004045 1.3e-32 142.9 97 74.2
Ah.16g101920 Amaranthus hybridus HOM05D003366 ORTHO05D004045 1.7e-32 142.5 99 73.7
Aa31LG5G13060 Aethionema arabicum HOM05D003366 ORTHO05D004045 1.1e-31 139.8 95 72.6
SEGI_01884 Sequoiadendron giganteum HOM05D003366 ORTHO05D004045 1.5e-31 139.4 97 71.1
CBR_g10789 Chara braunii HOM05D003366 ORTHO05D004045 3.3e-31 138.3 97 69.1
Mapoly0007s0091 Marchantia polymorpha HOM05D003366 ORTHO05D004045 2.8e-30 135.2 97 69.1
Os09g0255400 Oryza sativa ssp. japonica HOM05D003366 ORTHO05D004045 2.8e-30 135.2 96 68.8
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 4.7e-30 134.4 82 80.5
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.4e-29 132.9 82 79.3
Pp3c10_25830 Physcomitrium patens HOM05D003366 ORTHO05D004045 6.8e-29 130.6 97 67.0
EL10Ac2g04609 Beta vulgaris HOM05D003366 ORTHO05D004045 2.0e-28 129.0 143 53.8
SMO143G0312 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 4.4e-28 127.9 97 66.0
Zm00001eb414460 Zea mays HOM05D003366 ORTHO05D004045 7.5e-28 127.1 96 66.7
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 6.4e-27 124.0 74 82.4
SGA_v2.0_scaffold7G04167 Striga asiatica HOM05D000527 ORTHO05D000559 2.4e-26 122.1 85 76.5
Nitab4.5_0000774g0060 Nicotiana tabacum HOM05D003366 ORTHO05D004045 5.4e-26 120.9 71 83.1
Zm00001eb309260 Zea mays HOM05D003366 ORTHO05D004045 9.2e-26 120.2 96 62.5
BolC3t17665H Brassica oleracea HOM05D003366 ORTHO05D004045 1.0e-24 116.7 77 74.0
Dinv26592 Davidia involucrata HOM05D003366 ORTHO05D004045 1.7e-24 115.9 117 56.4
MCO11G068 Micromonas commoda HOM05D003366 ORTHO05D004045 3.9e-24 114.8 96 57.3
BcaC01g03298 Brassica carinata HOM05D003366 ORTHO05D004045 1.6e-22 109.4 73 74.0
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 3.6e-22 108.2 80 70.0
CAN.G338.38 Capsicum annuum HOM05D003366 ORTHO05D004045 1.1e-21 106.7 68 77.9
AagrBONN_evm.TU.Sc2ySwM_344.1836 Anthoceros agrestis HOM05D003366 ORTHO05D004045 1.8e-21 105.9 74 71.6
BcaB06g26784 Brassica carinata HOM05D003366 ORTHO05D004045 8.9e-21 103.6 97 60.8
Cre13.g602350 Chlamydomonas reinhardtii HOM05D003366 ORTHO05D004045 1.2e-20 103.2 91 52.7
PRCOL_00002196 Prasinoderma coloniale HOM05D003366 ORTHO05D004045 7.5e-20 100.5 97 50.5
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 2.4e-18 95.5 72 68.1
Cc00_g28210 Coffea canephora HOM05D003366 ORTHO05D004045 3.0e-16 88.6 52 82.7
Actinidia35201 Actinidia chinensis HOM05D003366 ORTHO05D004045 4.3e-15 84.7 55 74.5
SEGI_06301 Sequoiadendron giganteum HOM05D003366 ORTHO05D004045 1.0e-08 63.5 50 62.0
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 1.9e-07 59.3 85 36.5
Cpa.g.sc136.36 Carica papaya HOM05D003366 ORTHO05D004045 6.2e-06 54.3 41 65.9
SEGI_18782 Sequoiadendron giganteum HOM05D003366 ORTHO05D004045 6.2e-06 54.3 49 53.1


User provided reference genes

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