Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 8.0e-216 753.4 370 100.0
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 7.5e-198 693.7 370 91.1
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.2e-192 676.4 373 88.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 6.2e-192 674.1 373 87.9
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 8.0e-192 673.7 373 87.9
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.4e-191 672.9 360 90.8
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 4.4e-190 667.9 374 89.0
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.1e-188 663.3 384 85.4
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 3.2e-188 661.8 373 87.1
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 3.2e-188 661.8 372 87.6
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 5.4e-188 661.0 373 87.1
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.6e-187 659.4 372 87.4
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.6e-187 657.9 372 88.2
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 7.8e-187 657.1 372 86.3
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 5.1e-186 654.4 370 87.0
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.1e-185 653.3 373 85.5
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.3e-185 651.4 372 87.4
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 4.3e-185 651.4 370 86.5
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 4.3e-185 651.4 370 86.5
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.3e-185 650.6 372 87.4
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.3e-185 650.6 372 86.3
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 9.5e-185 650.2 370 85.7
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.6e-184 649.4 369 86.7
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.6e-184 649.4 370 86.5
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 4.7e-184 647.9 371 86.0
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 6.2e-184 647.5 370 85.7
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 8.1e-184 647.1 367 87.2
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 8.1e-184 647.1 373 86.3
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 4.0e-183 644.8 370 85.4
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 6.8e-183 644.0 370 85.7
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.8e-183 644.0 370 85.7
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 6.8e-183 644.0 397 80.4
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 2.0e-182 642.5 372 85.8
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 3.4e-182 641.7 372 86.0
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 5.8e-182 641.0 373 85.0
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 5.8e-182 641.0 370 84.3
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 7.5e-182 640.6 370 83.5
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 7.5e-182 640.6 370 85.1
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.7e-181 639.4 372 84.9
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.9e-181 638.6 370 84.6
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 3.7e-181 638.3 372 84.7
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 4.9e-181 637.9 370 85.4
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 6.4e-181 637.5 370 83.8
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.4e-181 637.5 370 84.9
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 8.3e-181 637.1 371 84.1
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 8.3e-181 637.1 384 82.6
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.9e-180 636.0 376 83.5
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.9e-180 636.0 370 84.6
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 2.4e-180 635.6 431 75.2
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 3.2e-180 635.2 373 84.5
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 4.1e-180 634.8 370 84.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 5.4e-180 634.4 379 84.4
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 5.4e-180 634.4 373 84.2
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 9.2e-180 633.6 372 84.1
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 9.2e-180 633.6 370 84.3
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.2e-179 633.3 370 84.6
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 1.6e-179 632.9 370 84.6
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.1e-179 632.5 373 83.6
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 2.7e-179 632.1 372 83.3
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.5e-179 631.7 372 84.9
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 3.5e-179 631.7 372 83.9
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 3.5e-179 631.7 370 84.1
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.6e-179 631.3 372 83.9
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.6e-179 631.3 369 84.6
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 6.0e-179 630.9 370 85.1
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 1.7e-178 629.4 370 83.0
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-178 628.2 373 83.4
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-178 628.2 373 83.4
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-178 628.2 373 82.8
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 6.6e-178 627.5 373 83.1
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.1e-177 626.7 363 86.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.1e-177 626.7 373 82.8
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.1e-177 626.7 371 81.9
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 1.5e-177 626.3 372 83.6
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.9e-177 625.9 409 77.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 2.5e-177 625.5 369 82.7
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 3.3e-177 625.2 373 83.4
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 2.1e-176 622.5 373 83.1
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 2.8e-176 622.1 370 83.0
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.2e-176 620.9 371 83.6
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.4e-175 619.0 373 83.1
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 3.1e-175 618.6 373 83.1
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 5.2e-175 617.8 370 81.9
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 5.2e-175 617.8 368 82.3
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 5.2e-175 617.8 369 82.9
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 8.9e-175 617.1 351 85.8
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 8.9e-175 617.1 373 82.8
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 8.9e-175 617.1 368 83.4
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 2.0e-174 615.9 366 82.2
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 4.4e-174 614.8 373 81.8
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 9.9e-174 613.6 370 84.3
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.8e-173 611.7 368 82.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 3.8e-173 611.7 371 80.3
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 3.8e-173 611.7 370 81.1
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 1.1e-172 610.1 370 81.1
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.4e-172 609.8 373 81.8
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 1.4e-172 609.8 369 82.4
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.4e-172 609.0 359 83.0
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.2e-172 608.6 370 80.8
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 7.1e-172 607.4 373 81.0
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.2e-171 606.7 370 79.2
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 2.7e-171 605.5 364 81.6
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 7.8e-171 604.0 372 80.6
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.3e-170 602.4 372 82.0
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.0e-170 602.1 356 82.3
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 3.9e-170 601.7 370 81.9
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 3.9e-170 601.7 364 81.0
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 3.9e-170 601.7 364 81.0
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 3.9e-170 601.7 364 81.0
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 3.9e-170 601.7 364 81.0
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 3.9e-170 601.7 364 81.0
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 8.7e-170 600.5 404 76.5
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.5e-169 599.0 368 77.7
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 4.3e-169 598.2 368 81.2
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 5.6e-169 597.8 350 83.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 7.3e-169 597.4 371 79.5
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 1.3e-168 596.7 368 77.7
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.6e-168 596.3 371 79.5
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 2.8e-168 595.5 371 80.6
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 8.1e-168 594.0 372 79.8
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.1e-167 593.6 371 78.7
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 3.1e-167 592.0 372 78.8
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.1e-167 592.0 351 83.2
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 5.3e-167 591.3 358 83.5
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 9.0e-167 590.5 371 78.7
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.2e-165 585.9 371 78.2
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 4.6e-163 578.2 351 82.1
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.0e-162 577.0 362 78.7
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.7e-162 576.2 355 80.0
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 6.6e-162 574.3 351 80.1
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.1e-161 573.5 362 77.1
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.1e-159 567.0 362 77.3
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 6.9e-159 564.3 360 78.1
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 2.6e-158 562.4 361 75.3
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 2.4e-156 555.8 288 94.1
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 3.5e-155 552.0 367 73.6
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 8.7e-154 547.4 359 74.4
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 4.9e-149 531.6 370 67.8
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 6.5e-149 531.2 397 71.0
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.6e-147 526.6 361 70.9
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 7.9e-147 524.2 370 67.8
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.5e-145 520.0 365 69.0
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.5e-145 519.2 371 67.9
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 2.5e-145 519.2 369 68.3
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.6e-144 516.5 367 67.0
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 2.7e-139 499.2 369 65.6
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 7.9e-139 497.7 359 69.9
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.8e-138 496.5 283 85.2
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 3.9e-138 495.4 276 88.0
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 6.7e-138 494.6 279 86.0
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.1e-137 493.8 325 75.4
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 4.3e-137 491.9 355 69.3
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.6e-136 490.0 348 73.6
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.8e-136 488.4 364 65.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.1e-135 487.3 327 75.2
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.4e-130 470.3 281 82.9
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.4e-127 460.3 280 81.1
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 4.1e-127 458.8 279 82.1
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 3.9e-122 442.2 241 90.5
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.3e-121 439.1 386 56.5
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 2.9e-117 426.0 275 77.5
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.9e-116 423.3 364 56.0
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 6.7e-114 414.8 275 73.5
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 3.3e-113 412.5 396 53.0
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 5.7e-113 411.8 370 54.3
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 4.1e-111 405.6 285 69.5
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.3e-93 346.7 197 83.2
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.5e-92 343.2 273 66.7
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.1e-91 338.6 200 82.5
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.3e-88 328.2 198 82.3
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 7.8e-86 321.6 177 87.0
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 1.2e-67 261.2 171 77.8
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 6.8e-58 228.8 266 52.3
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 2.9e-48 196.8 372 32.5
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.1e-44 184.9 113 81.4
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 7.4e-44 182.2 445 28.8
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 6.2e-43 179.1 120 72.5
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.4e-42 177.2 148 64.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.5e-41 174.5 120 70.8
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 4.5e-41 172.9 403 26.1
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 2.5e-36 157.1 115 66.1
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.2e-33 148.3 297 31.3
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 2.1e-27 127.5 84 73.8
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 2.0e-09 67.8 49 71.4
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 3.8e-08 63.5 68 51.5


User provided reference genes

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