Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022621.1 Olea europaea HOM05D004667 ORTHO05D005522 8.5e-97 357.1 188 100.0
Oeu016168.2 Olea europaea HOM05D004667 ORTHO05D005522 2.6e-69 265.8 237 64.1
MSTRG.4419 Avicennia marina HOM05D004667 ORTHO05D005522 2.0e-53 213.0 191 63.9
Dinv19946 Davidia involucrata HOM05D004667 ORTHO05D005522 1.1e-48 197.2 189 58.2
Migut.D01831 Erythranthe guttata HOM05D004667 ORTHO05D005522 1.9e-48 196.4 192 60.9
Lj5C112T10 Lonicera japonica HOM05D004667 ORTHO05D005522 1.6e-47 193.4 189 56.6
Nitab4.5_0000741g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 1.8e-46 189.9 187 56.7
Nitab4.5_0000026g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 4.9e-44 181.8 184 55.4
Actinidia04904 Actinidia chinensis HOM05D004667 ORTHO05D005522 3.5e-42 175.6 192 53.1
QL10p016532 Quercus lobata HOM05D004667 ORTHO05D005522 3.5e-42 175.6 192 53.6
Rhsim08G0156600 Rhododendron simsii HOM05D004667 ORTHO05D005522 3.5e-42 175.6 190 55.3
Dinv38692 Davidia involucrata HOM05D004667 ORTHO05D005522 4.6e-42 175.3 190 53.7
Duzib084G1199 Durio zibethinus HOM05D004667 ORTHO05D005522 1.7e-41 173.3 192 52.1
Peaxi162Scf00712g00029 Petunia axillaris HOM05D004667 ORTHO05D005522 1.7e-41 173.3 178 54.5
CSS0005857 Camellia sinensis var. sinensis HOM05D004667 ORTHO05D005522 1.9e-40 169.9 183 55.2
Cpa.g.c30141.2 Carica papaya HOM05D004667 ORTHO05D005522 1.9e-40 169.9 190 52.1
Medtr4g108360 Medicago truncatula HOM05D004667 ORTHO05D005522 1.2e-39 167.2 188 52.7
Ah.08g216800 Amaranthus hybridus HOM05D004667 ORTHO05D005522 1.6e-39 166.8 187 48.7
Hma1.2p1_0735F.1_g210470 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 1.6e-39 166.8 187 54.5
Lj4g0024645 Lotus japonicus HOM05D004667 ORTHO05D005522 3.6e-39 165.6 189 52.4
Lalb_Chr07g0177971 Lupinus albus HOM05D004667 ORTHO05D005522 6.2e-39 164.9 189 52.4
Ca_21829_v3 Cicer arietinum L. HOM05D004667 ORTHO05D005522 8.1e-39 164.5 189 51.9
Sc04g0002550 Simmondsia chinensis HOM05D004667 ORTHO05D005522 8.1e-39 164.5 184 52.2
Ciclev10021941m.g Citrus clementina HOM05D004667 ORTHO05D005522 1.1e-38 164.1 184 53.3
Thecc.03G084200 Theobroma cacao HOM05D004667 ORTHO05D005522 3.1e-38 162.5 192 50.0
TPR.G34729 Trifolium pratense HOM05D004667 ORTHO05D005522 3.1e-38 162.5 188 51.6
arahy.Tifrunner.gnm1.ann1.0RV7R4 Arachis hypogaea HOM05D004667 ORTHO05D005522 4.0e-38 162.2 186 49.5
Duzib205G0185 Durio zibethinus HOM05D004667 ORTHO05D005522 4.0e-38 162.2 186 51.1
Cfa018960 Carpinus fangiana HOM05D004667 ORTHO05D005522 3.4e-37 159.1 192 49.5
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 5.8e-37 158.3 192 48.4
Nn4g23126 Nelumbo nucifera HOM05D004667 ORTHO05D005522 5.8e-37 158.3 194 47.4
Eucgr.B00470 Eucalyptus grandis HOM05D004667 ORTHO05D005522 7.5e-37 157.9 186 51.1
Lalb_Chr13g0303301 Lupinus albus HOM05D004667 ORTHO05D005522 7.5e-37 157.9 186 51.6
Prupe.5G190100 Prunus persica HOM05D004667 ORTHO05D005522 7.5e-37 157.9 192 49.5
Gohir.D11G033900 Gossypium hirsutum HOM05D004667 ORTHO05D005522 9.9e-37 157.5 187 51.3
PGR083G2477 Punica granatum HOM05D004667 ORTHO05D005522 1.3e-36 157.1 180 53.3
MD06G1191600 Malus domestica HOM05D004667 ORTHO05D005522 1.7e-36 156.8 191 50.3
Gohir.A11G030611 Gossypium hirsutum HOM05D004667 ORTHO05D005522 2.9e-36 156.0 187 51.3
COL.COLO4_24543 Corchorus olitorius HOM05D004667 ORTHO05D005522 3.7e-36 155.6 192 49.0
vmacro17553 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 4.9e-36 155.2 167 54.5
Gorai.007G036700 Gossypium raimondii HOM05D004667 ORTHO05D005522 6.4e-36 154.8 187 50.8
Sed0008118 Sechium edule HOM05D004667 ORTHO05D005522 1.4e-35 153.7 178 50.0
Manes.14G077100 Manihot esculenta HOM05D004667 ORTHO05D005522 1.9e-35 153.3 191 47.6
Psat4g051040 Pisum sativum HOM05D004667 ORTHO05D005522 2.4e-35 152.9 187 50.8
RcHm_v2.0_Chr7g0181001 Rosa chinensis HOM05D004667 ORTHO05D005522 5.4e-35 151.8 191 49.2
TAR629G0869 Trochodendron aralioides HOM05D000350 ORTHO05D005522 7.1e-35 151.4 187 46.5
AUR62001482 Chenopodium quinoa HOM05D004667 ORTHO05D005522 2.7e-34 149.4 187 46.5
Glyma.05G027600 Glycine max HOM05D004667 ORTHO05D005522 2.7e-34 149.4 186 48.9
MD14G1198000 Malus domestica HOM05D004667 ORTHO05D005522 4.6e-34 148.7 191 47.6
arahy.Tifrunner.gnm1.ann1.U816VA Arachis hypogaea HOM05D004667 ORTHO05D005522 6.0e-34 148.3 186 46.8
ClCG06G016270 Citrullus lanatus HOM05D004667 ORTHO05D005522 7.8e-34 147.9 197 46.7
Phvul.003G191000 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 7.8e-34 147.9 185 49.2
MELO3C017166.2 Cucumis melo HOM05D004667 ORTHO05D005522 3.0e-33 146.0 197 45.7
Glyma.17G098900 Glycine max HOM05D004667 ORTHO05D005522 3.0e-33 146.0 189 48.1
TAR371G0790 Trochodendron aralioides HOM05D004667 ORTHO05D005522 3.0e-33 146.0 187 43.9
CsaV3_1G002260 Cucumis sativus L. HOM05D004667 ORTHO05D005522 3.9e-33 145.6 186 47.3
HanXRQChr05g0158091 Helianthus annuus HOM05D004667 ORTHO05D005522 5.1e-33 145.2 187 45.5
ECA246G3018 Erigeron canadensis HOM05D004667 ORTHO05D005522 1.1e-32 144.1 190 45.3
GSVIVG01011386001 Vitis vinifera HOM05D004667 ORTHO05D005522 1.5e-32 143.7 188 43.6
FvH4_5g15171 Fragaria vesca HOM05D004667 ORTHO05D005522 1.9e-32 143.3 189 47.1
PSO832G1839 Papaver somniferum HOM05D004667 ORTHO05D005522 1.9e-32 143.3 194 44.8
VMungo1215G1912 Vigna mungo HOM05D004667 ORTHO05D005522 2.5e-32 142.9 181 47.0
FAN08G0134 Fragaria x ananassa HOM05D004667 ORTHO05D005522 3.3e-32 142.5 192 47.9
Duzib068G0725 Durio zibethinus HOM05D004667 ORTHO05D005522 4.3e-32 142.1 192 45.8
CANSAT80G1185 Cannabis sativa HOM05D004667 ORTHO05D005522 5.6e-32 141.7 188 46.8
PSO063G1198 Papaver somniferum HOM05D004667 ORTHO05D005522 5.6e-32 141.7 194 44.8
Hund02659 Selenicereus undatus HOM05D004667 ORTHO05D005522 5.6e-32 141.7 214 43.0
AUR62009884 Chenopodium quinoa HOM05D004667 ORTHO05D005522 9.5e-32 141.0 187 46.0
MBI02_g23680_MAGBIO Magnolia biondii HOM05D004667 ORTHO05D005522 9.5e-32 141.0 197 42.6
Aqoxy3G03350 Aquilegia oxysepala HOM05D004667 ORTHO05D005522 1.2e-31 140.6 201 43.3
TWI15G0884 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 1.2e-31 140.6 192 45.8
Potri.003G074400 Populus trichocarpa HOM05D004667 ORTHO05D005522 3.6e-31 139.0 190 47.4
Potri.015G142700 Populus trichocarpa HOM05D004667 ORTHO05D005522 4.7e-31 138.7 188 45.2
Sabra03G0045100 Salix brachista HOM05D004667 ORTHO05D005522 1.1e-30 137.5 191 47.6
Nn3g17203 Nelumbo nucifera HOM05D004667 ORTHO05D005522 1.4e-30 137.1 191 44.0
TWI60G0935 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 2.4e-30 136.3 186 45.2
PGSC0003DMG400000599 Solanum tuberosum HOM05D004667 ORTHO05D005522 2.6e-29 132.9 187 43.9
EL10Ac7g16410 Beta vulgaris HOM05D004667 ORTHO05D005522 9.9e-29 131.0 185 41.6
CiPaw.11G042700 Carya illinoinensis HOM05D004667 ORTHO05D005522 9.9e-29 131.0 189 41.8
Nitab4.5_0002257g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 2.2e-28 129.8 192 42.2
Solyc03g116340.3 Solanum lycopersicum HOM05D004667 ORTHO05D005522 2.2e-28 129.8 187 43.3
Cc04_g16930 Coffea canephora HOM05D004667 ORTHO05D005522 4.9e-28 128.6 189 42.3
Nitab4.5_0014986g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 4.9e-28 128.6 192 41.7
Actinidia17543 Actinidia chinensis HOM05D004667 ORTHO05D005522 1.1e-27 127.5 190 42.1
Sopen03g035270 Solanum pennellii HOM05D004667 ORTHO05D005522 1.1e-27 127.5 187 42.8
CAN.G407.116 Capsicum annuum HOM05D004667 ORTHO05D005522 3.2e-27 125.9 187 41.7
VMungo1309G0024 Vigna mungo HOM05D004667 ORTHO05D005522 9.2e-27 124.4 184 42.4
Cc07_g03280 Coffea canephora HOM05D004667 ORTHO05D005522 2.1e-26 123.2 196 37.8
Peaxi162Scf00274g00834 Petunia axillaris HOM05D004667 ORTHO05D005522 1.0e-25 120.9 195 42.6
Hma1.2p1_0449F.1_g155390 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 2.3e-25 119.8 186 40.9
Rhsim08G0068600 Rhododendron simsii HOM05D004667 ORTHO05D005522 3.9e-25 119.0 188 38.3
Sed0021322 Sechium edule HOM05D004667 ORTHO05D005522 5.1e-25 118.6 182 40.7
GSVIVG01008025001 Vitis vinifera HOM05D004667 ORTHO05D005522 5.1e-25 118.6 136 51.5
Actinidia37637 Actinidia chinensis HOM05D004667 ORTHO05D005522 1.1e-24 117.5 143 51.0
Phvul.009G188251 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 1.1e-24 117.5 190 40.5
Lsat_1_v5_gn_4_178121 Lactuca sativa HOM05D004667 ORTHO05D005522 1.9e-24 116.7 180 36.7
Actinidia02716 Actinidia chinensis HOM05D004667 ORTHO05D005522 9.6e-24 114.4 190 39.5
vmacro18196 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 2.1e-23 113.2 183 38.8
DCAR_011136 Daucus carota HOM05D004667 ORTHO05D005522 2.8e-23 112.8 188 35.6
DCAR_021526 Daucus carota HOM05D004667 ORTHO05D005522 3.6e-23 112.5 184 40.2
ECA232G3869 Erigeron canadensis HOM05D004667 ORTHO05D005522 6.2e-23 111.7 185 35.1
Migut.H00911 Erythranthe guttata HOM05D004667 ORTHO05D005522 2.4e-22 109.8 200 35.5
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 2.4e-22 109.8 182 35.2
MSTRG.3233 Avicennia marina HOM05D004667 ORTHO05D005522 6.9e-22 108.2 194 36.1
MSTRG.23944 Avicennia marina HOM05D004667 ORTHO05D005522 1.2e-21 107.5 187 34.2
HanXRQChr09g0265291 Helianthus annuus HOM05D004667 ORTHO05D005522 1.2e-21 107.5 184 37.0
CDE05G2553 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 2.6e-21 106.3 195 36.4
CDE05G0260 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 3.4e-21 105.9 203 36.0
Lsat_1_v5_gn_5_19381 Lactuca sativa HOM05D000189 ORTHO05D000474 9.9e-21 104.4 140 42.9
SGA_v2.0_scaffold59G20685 Striga asiatica HOM05D004667 ORTHO05D005522 1.3e-20 104.0 189 33.9
ATR0564G258 Amborella trichopoda HOM05D004667 ORTHO05D005522 2.2e-20 103.2 202 37.1
SalBow1G0094 Salvia bowleyana HOM05D004667 ORTHO05D005522 2.2e-20 103.2 185 37.3
Atru.chr9.2269 Acer truncatum HOM05D004667 ORTHO05D005522 3.8e-20 102.4 179 40.2
Sabra15G0152700 Salix brachista HOM05D004667 ORTHO05D005522 1.4e-19 100.5 139 45.3
Manes.06G094100 Manihot esculenta HOM05D004667 ORTHO05D005522 6.0e-18 95.1 187 35.3
Zm00001eb018460 Zea mays HOM05D004667 ORTHO05D005522 1.7e-17 93.6 209 33.5
Lsat_1_v5_gn_4_108900 Lactuca sativa HOM05D000650 ORTHO05D000735 3.0e-17 92.8 103 53.4
CDE09G1261 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 1.5e-16 90.5 186 34.9
AL5G26930 Arabidopsis lyrata HOM05D004667 ORTHO05D005522 4.3e-16 89.0 197 36.0
vmacro18198 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 1.6e-15 87.0 168 33.9
Oeu021379.1 Olea europaea HOM05D004667 ORTHO05D005522 2.8e-15 86.3 189 31.2
THA.LOC104818253 Tarenaya hassleriana HOM05D004667 ORTHO05D005522 6.2e-15 85.1 194 33.0
BcaB02g10693 Brassica carinata HOM05D004667 ORTHO05D005522 1.4e-14 84.0 189 37.0
Aa31LG4G16380 Aethionema arabicum HOM05D004667 ORTHO05D005522 2.4e-14 83.2 187 33.2
Sp5g14280 Schrenkiella parvula HOM05D004667 ORTHO05D005522 3.1e-14 82.8 197 34.0
Os07g0628500 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 1.2e-13 80.9 200 31.5
Os11g0601700 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 2.6e-13 79.7 108 42.6
Carub.0005s1377 Capsella rubella HOM05D004667 ORTHO05D005522 3.4e-13 79.3 198 32.8
AT3G47640 Arabidopsis thaliana HOM05D004667 ORTHO05D005522 5.8e-13 78.6 196 35.2
BraA01t02497Z Brassica rapa HOM05D004667 ORTHO05D005522 2.2e-12 76.6 194 33.5
Zm00001eb328250 Zea mays HOM05D004667 ORTHO05D005522 2.2e-12 76.6 200 29.0
A01p25820 Brassica napus HOM05D004667 ORTHO05D005522 4.9e-12 75.5 194 33.5
BraA06t25665Z Brassica rapa HOM05D004667 ORTHO05D005522 6.4e-12 75.1 190 33.7
BcaB05g23064 Brassica carinata HOM05D004667 ORTHO05D005522 8.4e-12 74.7 194 34.0
CDE02G4410 Ceratophyllum demersum HOM05D001668 ORTHO05D005522 8.4e-12 74.7 143 36.4
A06p27240 Brassica napus HOM05D004667 ORTHO05D005522 2.4e-11 73.2 190 33.2
Thhalv10010670m.g Eutrema salsugineum HOM05D004667 ORTHO05D005522 4.2e-11 72.4 195 32.3
BolC1t03209H Brassica oleracea HOM05D004667 ORTHO05D005522 1.2e-10 70.9 194 32.0
CARHR156320 Cardamine hirsuta HOM05D004667 ORTHO05D005522 1.2e-10 70.9 197 33.5
BcaC01g02286 Brassica carinata HOM05D004667 ORTHO05D005522 2.1e-10 70.1 195 32.3
C03p67020 Brassica napus HOM05D004667 ORTHO05D005522 1.3e-09 67.4 190 32.6
BolC3t18977H Brassica oleracea HOM05D004667 ORTHO05D005522 1.3e-09 67.4 190 32.6
C01p32730 Brassica napus HOM05D004667 ORTHO05D005522 1.1e-08 64.3 105 38.1
BolC3t18707H Brassica oleracea HOM05D004667 ORTHO05D005522 1.9e-08 63.5 69 49.3
Os03g0379300 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 3.3e-08 62.8 204 30.4
BcaC01g00891 Brassica carinata HOM05D004667 ORTHO05D005522 7.4e-08 61.6 69 47.8
DCAR_016539 Daucus carota HOM05D004667 ORTHO05D005522 1.4e-06 57.4 68 50.0
unitig_0.g780 Utricularia gibba HOM05D004667 ORTHO05D005522 2.4e-06 56.6 59 55.9
BcaC09g49811 Brassica carinata HOM05D004667 ORTHO05D005522 6.9e-06 55.1 175 30.3


User provided reference genes

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