Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 5.6e-119 431.0 228 100.0
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 8.2e-54 214.5 262 53.4
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 2.0e-52 209.9 285 46.3
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 3.6e-49 199.1 291 47.4
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 1.0e-48 197.6 286 45.8
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 6.8e-48 194.9 286 44.8
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 6.8e-48 194.9 274 46.4
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 6.8e-48 194.9 268 47.0
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 1.5e-47 193.7 274 46.0
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 2.6e-47 193.0 274 46.0
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 4.4e-47 192.2 265 46.8
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 7.5e-47 191.4 278 44.6
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 7.5e-47 191.4 270 46.3
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 6.3e-46 188.3 289 42.9
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 5.4e-45 185.3 283 43.1
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 1.2e-44 184.1 269 45.0
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 1.2e-44 184.1 287 44.3
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 1.6e-44 183.7 284 42.6
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 1.6e-44 183.7 273 43.2
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 1.6e-44 183.7 221 51.1
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 4.5e-44 182.2 266 45.1
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 5.9e-44 181.8 278 42.8
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 1.0e-43 181.0 291 44.0
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 1.3e-43 180.6 283 42.4
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 1.3e-43 180.6 264 45.1
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 1.3e-43 180.6 264 43.9
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.2e-43 179.9 268 44.0
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.2e-43 179.9 273 45.8
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 3.8e-43 179.1 259 44.8
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 6.5e-43 178.3 289 42.2
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 1.5e-42 177.2 251 45.8
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 1.9e-42 176.8 283 42.0
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 1.9e-42 176.8 282 44.0
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 2.5e-42 176.4 286 43.7
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 3.2e-42 176.0 260 44.2
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 5.5e-42 175.3 286 42.7
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 9.4e-42 174.5 269 43.5
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.2e-41 174.1 262 44.7
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 1.2e-41 174.1 261 43.7
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 6.1e-41 171.8 268 44.4
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 8.0e-41 171.4 286 40.9
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 1.8e-40 170.2 273 45.4
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 1.8e-40 170.2 261 42.5
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 1.5e-39 167.2 292 41.1
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 2.6e-39 166.4 263 43.0
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.6e-39 166.4 288 41.0
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.6e-39 166.4 273 42.5
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 2.6e-39 166.4 283 42.0
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 3.4e-39 166.0 259 43.2
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 3.4e-39 166.0 266 41.4
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 3.4e-39 166.0 291 40.9
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 3.4e-39 166.0 266 42.1
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 5.7e-39 165.2 284 39.4
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 5.7e-39 165.2 259 41.7
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 9.8e-39 164.5 283 39.9
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-38 164.1 259 42.9
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.7e-38 163.7 293 41.0
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 1.7e-38 163.7 265 44.2
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 2.2e-38 163.3 264 43.2
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 2.2e-38 163.3 292 40.4
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.8e-38 162.9 282 40.1
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.9e-38 162.2 252 42.5
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 4.9e-38 162.2 262 42.4
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 1.1e-37 161.0 260 40.4
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.4e-37 160.6 289 39.1
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.8e-37 160.2 288 40.3
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 3.1e-37 159.5 262 41.2
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 5.4e-37 158.7 267 40.8
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 1.2e-36 157.5 273 41.0
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.6e-36 157.1 244 42.6
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 1.6e-36 157.1 280 41.1
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 2.7e-36 156.4 286 40.9
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 2.7e-36 156.4 268 41.8
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.7e-36 156.4 275 40.4
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 3.5e-36 156.0 261 41.0
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 3.5e-36 156.0 285 40.4
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.5e-36 156.0 244 42.6
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.5e-36 156.0 244 42.2
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 5.9e-36 155.2 287 39.7
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.9e-36 155.2 244 42.2
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 5.9e-36 155.2 267 40.4
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 5.9e-36 155.2 271 39.9
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 7.7e-36 154.8 275 38.9
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 7.7e-36 154.8 285 40.7
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 7.7e-36 154.8 267 42.7
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 7.7e-36 154.8 197 47.2
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 1.0e-35 154.5 287 39.4
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 1.3e-35 154.1 266 41.7
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 2.9e-35 152.9 274 40.9
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 3.8e-35 152.5 285 40.0
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.5e-34 150.6 266 42.1
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 1.9e-34 150.2 288 38.9
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 1.9e-34 150.2 292 40.1
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 1.9e-34 150.2 266 41.0
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 2.5e-34 149.8 265 40.4
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 4.2e-34 149.1 290 37.6
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 4.2e-34 149.1 290 37.6
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 4.2e-34 149.1 290 37.6
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 4.2e-34 149.1 275 41.1
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 5.5e-34 148.7 259 41.3
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 9.5e-34 147.9 283 39.2
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 2.1e-33 146.7 256 41.8
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 2.1e-33 146.7 270 38.5
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 2.1e-33 146.7 264 39.8
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 2.8e-33 146.4 282 39.7
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.1e-33 145.2 265 39.2
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 1.0e-32 144.4 264 40.9
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 1.4e-32 144.1 264 40.9
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 1.8e-32 143.7 228 43.4
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 2.3e-32 143.3 291 39.2
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 1.2e-31 141.0 264 40.5
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-31 140.2 284 36.3
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 3.4e-31 139.4 284 35.9
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.7e-31 138.7 270 38.9
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 9.8e-31 137.9 262 39.3
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 4.9e-30 135.6 282 38.3
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 6.3e-30 135.2 226 41.6
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 4.1e-29 132.5 273 39.2
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.6e-28 130.6 266 38.3
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 2.7e-28 129.8 289 37.4
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 3.5e-28 129.4 305 36.1
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.0e-27 127.9 267 39.0
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.7e-27 127.1 169 48.5
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.7e-27 127.1 169 48.5
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 2.9e-27 126.3 286 36.4
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 8.6e-27 124.8 238 39.1
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 1.1e-26 124.4 292 36.3
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 1.5e-26 124.0 286 35.7
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 1.9e-26 123.6 167 50.3
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 4.3e-26 122.5 292 36.0
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 7.3e-26 121.7 253 37.5
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.2e-25 120.9 281 36.3
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 1.2e-25 120.9 173 47.4
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.6e-25 120.6 278 36.3
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 8.0e-25 118.2 289 32.9
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 1.5e-23 114.0 248 36.3
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 2.0e-23 113.6 287 33.1
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 4.4e-23 112.5 258 37.2
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 2.2e-22 110.2 266 36.1
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 3.7e-22 109.4 175 44.6
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 6.4e-22 108.6 191 39.3
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 7.0e-21 105.1 265 34.3
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 3.5e-20 102.8 125 53.6
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 3.0e-19 99.8 217 36.4
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 9.5e-18 94.7 279 31.9
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 4.0e-16 89.4 274 30.7
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 6.8e-16 88.6 214 33.2
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 7.5e-15 85.1 68 61.8
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.9e-14 83.2 131 46.6
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 8.3e-14 81.6 62 62.9
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.9e-13 80.5 119 38.7
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.4e-13 79.0 90 50.0
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 4.6e-12 75.9 117 40.2
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 6.0e-12 75.5 84 57.1
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.3e-11 73.6 73 54.8
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 3.9e-11 72.8 264 30.7
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 3.3e-10 69.7 60 53.3
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 4.3e-10 69.3 73 54.8
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 9.5e-10 68.2 131 35.1
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 1.2e-09 67.8 205 28.8
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 2.1e-09 67.0 201 30.8
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 6.2e-09 65.5 137 32.8
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 1.8e-08 63.9 77 40.3
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 3.1e-08 63.2 266 26.7
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 3.4e-07 59.7 77 48.1
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 4.9e-06 55.8 58 50.0


User provided reference genes

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