Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 7.4e-84 313.9 169 100.0
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.3e-59 231.1 170 74.7
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 8.2e-59 230.7 169 72.8
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 1.8e-58 229.6 169 72.2
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.1e-58 228.8 169 72.8
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 5.3e-58 228.0 169 70.4
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 7.0e-58 227.6 169 71.6
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 9.1e-58 227.3 168 70.2
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.6e-57 225.7 169 71.6
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 5.9e-57 224.6 170 71.8
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 69.2
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 69.8
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 8.5e-56 220.7 169 71.0
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 70.4
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 1.9e-55 219.5 170 71.8
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 66.9
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 69.8
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 66.3
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 7.2e-55 217.6 170 69.4
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 66.9
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 68.0
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 66.9
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 70.4
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 67.5
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 69.8
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 4.7e-54 214.9 170 68.8
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 69.2
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.4e-53 213.4 169 66.3
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.8e-53 213.0 171 69.6
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 1.8e-53 213.0 169 68.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-53 213.0 169 68.0
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.8e-53 213.0 169 65.1
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 68.4
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 71.0
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 3.0e-53 212.2 169 67.5
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.0e-53 212.2 169 66.3
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 4.0e-53 211.8 170 68.2
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 5.2e-53 211.5 170 70.0
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 8.8e-53 210.7 170 67.1
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 8.8e-53 210.7 170 66.5
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 8.8e-53 210.7 169 68.6
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.2e-52 210.3 169 68.6
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.2e-52 210.3 171 67.3
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 1.5e-52 209.9 169 66.3
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 2.6e-52 209.1 169 66.3
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.3e-52 208.8 170 67.6
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 3.3e-52 208.8 169 68.6
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 4.4e-52 208.4 161 68.3
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 5.7e-52 208.0 169 66.9
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 7.5e-52 207.6 171 67.8
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 7.5e-52 207.6 170 69.4
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 7.5e-52 207.6 169 65.1
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 1.3e-51 206.8 170 65.9
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.3e-51 206.8 169 66.9
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.7e-51 206.5 169 66.3
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.7e-51 206.5 170 66.5
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.7e-51 206.5 169 66.9
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.7e-51 206.5 172 66.3
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 3.7e-51 205.3 170 66.5
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 3.7e-51 205.3 170 66.5
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 3.7e-51 205.3 170 66.5
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.7e-51 205.3 169 64.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 4.8e-51 204.9 170 65.3
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 4.8e-51 204.9 170 65.9
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 4.8e-51 204.9 170 65.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 6.3e-51 204.5 172 64.0
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 6.3e-51 204.5 170 67.1
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 6.3e-51 204.5 169 66.3
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 8.3e-51 204.1 169 66.3
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 8.3e-51 204.1 169 65.7
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.1e-50 203.8 169 66.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.4e-50 203.4 170 67.6
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 1.4e-50 203.4 169 66.3
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.8e-50 203.0 170 67.1
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.8e-50 203.0 169 65.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.8e-50 203.0 164 68.9
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.8e-50 203.0 170 64.1
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.4e-50 202.6 170 66.5
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 3.1e-50 202.2 171 66.7
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 3.1e-50 202.2 169 64.5
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 4.1e-50 201.8 170 65.3
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 5.3e-50 201.4 170 64.1
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 5.3e-50 201.4 169 65.1
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 5.3e-50 201.4 170 64.1
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 5.3e-50 201.4 169 65.1
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 5.3e-50 201.4 170 65.9
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 9.1e-50 200.7 171 66.7
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 9.1e-50 200.7 167 68.3
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 1.6e-49 199.9 172 63.4
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.6e-49 199.9 170 66.5
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 2.0e-49 199.5 171 66.1
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 2.0e-49 199.5 172 65.1
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.0e-49 199.5 169 63.3
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.7e-49 199.1 172 65.1
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 3.5e-49 198.7 171 63.7
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 4.5e-49 198.4 169 62.7
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 4.5e-49 198.4 171 65.5
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 4.5e-49 198.4 171 65.5
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 7.7e-49 197.6 169 63.3
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.0e-48 197.2 169 64.5
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 1.3e-48 196.8 170 63.5
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 1.7e-48 196.4 171 64.3
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 1.7e-48 196.4 171 64.3
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 1.7e-48 196.4 171 64.3
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.7e-48 196.4 169 63.9
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 2.2e-48 196.1 170 64.1
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.9e-48 195.7 171 66.1
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 3.8e-48 195.3 169 64.5
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.8e-48 195.3 169 63.9
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.8e-48 195.3 169 63.9
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 3.8e-48 195.3 170 61.2
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 3.8e-48 195.3 167 64.7
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 6.5e-48 194.5 169 63.3
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 8.5e-48 194.1 169 63.3
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 1.5e-47 193.4 162 65.4
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 2.5e-47 192.6 170 61.8
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.5e-47 192.6 173 64.2
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 3.2e-47 192.2 171 64.3
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 9.4e-47 190.7 169 59.8
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.6e-46 189.9 158 67.1
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.1e-46 189.5 165 64.2
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 2.1e-46 189.5 166 62.7
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 6.1e-46 188.0 169 61.5
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.4e-45 186.8 166 62.0
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.2e-44 183.7 173 61.3
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 2.0e-44 183.0 165 59.4
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.0e-44 183.0 170 60.0
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 3.4e-44 182.2 173 60.7
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 3.4e-44 182.2 171 60.8
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 3.4e-44 182.2 171 60.8
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 5.7e-44 181.4 169 60.9
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 5.7e-44 181.4 172 62.2
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 7.5e-44 181.0 161 58.4
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.7e-43 179.9 148 65.5
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 3.7e-43 178.7 170 62.9
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 7.0e-42 174.5 169 60.4
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 9.1e-42 174.1 171 58.5
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.3e-40 170.2 146 67.8
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 8.9e-37 157.5 102 71.6
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 5.7e-36 154.8 170 56.5
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.7e-35 152.1 100 72.0
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.8e-34 149.8 102 67.6
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 4.1e-34 148.7 172 53.5
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.0e-33 146.4 147 60.5
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 4.5e-33 145.2 171 52.6
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 5.9e-33 144.8 158 53.2
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 8.6e-32 141.0 100 65.0
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 5.2e-29 131.7 171 46.8
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.7e-27 126.7 166 45.8
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 2.2e-27 126.3 175 44.6
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 2.2e-27 126.3 217 40.6
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 1.9e-26 123.2 170 46.5
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.9e-26 123.2 174 43.1
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 3.5e-25 119.0 174 39.7
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 8.6e-24 114.4 136 50.0
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.5e-23 112.8 70 74.3
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.3e-23 112.1 70 74.3
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 1.2e-22 110.5 173 45.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.1e-22 109.8 147 46.3
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 4.7e-22 108.6 171 40.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 1.4e-18 97.1 163 39.9
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.5e-17 92.4 65 72.3
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 9.5e-15 84.3 81 55.6
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 3.7e-11 72.4 44 75.0
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 8.3e-11 71.2 70 70.0


User provided reference genes

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