Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 0.0e+00 1112.4 570 100.0
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 6.7e-254 880.6 570 79.1
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 8.7e-254 880.2 570 79.8
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.2e-250 869.8 572 76.9
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 2.9e-249 865.1 571 76.0
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.4e-248 862.8 561 79.0
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.5e-248 862.1 567 78.5
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 2.7e-247 858.6 570 77.2
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 1.3e-246 856.3 569 76.1
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 1.8e-246 855.9 570 77.0
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 1.1e-245 853.2 571 76.2
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 1.9e-245 852.4 567 75.3
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 6.3e-244 847.4 565 77.0
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 6.3e-244 847.4 573 74.0
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 8.2e-244 847.0 567 77.2
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.8e-243 845.9 572 74.0
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 4.1e-243 844.7 572 73.8
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 7.7e-242 840.5 569 75.6
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 1.3e-241 839.7 570 74.6
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 2.2e-241 839.0 571 73.9
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 5.0e-241 837.8 572 72.7
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 5.0e-241 837.8 566 74.2
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 1.4e-240 836.3 571 73.2
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 2.5e-240 835.5 571 73.9
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 4.6e-239 831.2 570 73.2
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 4.6e-239 831.2 566 73.9
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.4e-238 829.7 572 72.9
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 3.9e-238 828.2 568 73.6
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 8.8e-238 827.0 577 72.6
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 1.5e-237 826.2 641 66.8
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 1.5e-237 826.2 571 72.7
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 2.0e-237 825.9 556 75.2
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 1.7e-236 822.8 572 73.3
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 2.2e-236 822.4 563 73.5
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 3.7e-236 821.6 569 72.1
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 4.8e-236 821.2 569 72.9
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 1.8e-235 819.3 571 72.3
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 2.4e-235 818.9 592 72.0
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 4.1e-235 818.1 570 71.9
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 5.3e-235 817.8 570 71.9
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 6.9e-235 817.4 566 72.6
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 1.2e-234 816.6 577 72.3
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 2.0e-234 815.8 568 72.5
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 3.4e-234 815.1 571 71.3
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 1.3e-233 813.1 571 73.2
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 1.3e-233 813.1 571 71.5
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 2.9e-233 812.0 566 72.1
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 2.9e-233 812.0 564 75.4
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 1.4e-232 809.7 573 72.6
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 1.4e-232 809.7 581 70.9
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 1.9e-232 809.3 572 71.9
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 1.9e-232 809.3 573 72.4
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 3.2e-232 808.5 616 70.9
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 7.2e-232 807.4 573 71.7
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 9.4e-232 807.0 573 72.3
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 1.2e-231 806.6 554 73.8
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 1.2e-231 806.6 574 73.2
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 2.7e-231 805.4 573 72.1
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 3.6e-231 805.1 573 71.6
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 6.1e-231 804.3 573 71.9
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 3.0e-230 802.0 573 71.7
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 3.0e-230 802.0 573 71.6
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 1.7e-228 796.2 552 73.0
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 1.1e-227 793.5 557 71.6
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 1.8e-227 792.7 569 70.8
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 4.1e-227 791.6 573 70.5
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 5.3e-227 791.2 571 70.9
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 2.6e-226 788.9 633 65.7
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 2.2e-225 785.8 564 70.9
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 3.8e-225 785.0 570 71.2
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 2.3e-222 775.8 595 67.9
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 2.6e-221 772.3 554 70.2
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.8e-220 768.8 588 70.7
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 8.2e-220 767.3 577 66.6
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 5.9e-218 761.1 566 68.0
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 2.2e-217 759.2 540 74.1
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 4.2e-216 755.0 589 67.6
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 4.7e-215 751.5 572 68.4
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 9.8e-213 743.8 573 67.7
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 6.3e-212 741.1 571 65.5
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 8.3e-212 740.7 552 69.4
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.0e-209 733.8 578 65.6
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 2.9e-209 732.3 555 69.5
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 8.0e-207 724.2 566 65.7
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 6.8e-206 721.1 606 64.7
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.5e-200 702.6 579 64.4
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 1.9e-192 676.4 433 77.4
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 1.5e-189 666.8 511 66.3
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 4.9e-180 635.2 691 52.8
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 9.9e-173 610.9 434 71.4
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 1.6e-170 603.6 572 56.3
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 1.8e-166 590.1 576 54.7
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 7.6e-157 558.1 568 53.5
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 4.5e-149 532.3 571 49.7
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 1.1e-136 491.1 556 49.8
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 9.4e-123 444.9 325 71.4
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 6.1e-114 415.6 276 76.4
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 7.2e-99 365.5 275 66.5
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 1.9e-91 340.9 226 76.1
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 2.5e-91 340.5 315 56.8
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 4.1e-78 296.6 199 75.9
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 3.1e-57 227.3 300 49.7
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.0e-52 212.2 165 66.1
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 3.4e-48 197.2 240 43.3
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 4.0e-41 173.7 151 58.3
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 1.5e-40 171.8 118 72.9
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.3e-39 168.7 120 68.3
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.2e-37 162.2 120 66.7
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 1.8e-33 148.3 119 68.1
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 2.0e-32 144.8 132 53.8
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.3e-28 132.1 103 70.9
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 4.5e-24 117.1 95 62.1
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 4.9e-23 113.6 178 41.6
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 7.9e-21 106.3 125 49.6
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.6e-18 98.6 190 37.9
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 4.1e-17 94.0 86 60.5
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 5.0e-15 87.0 140 41.4
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 7.9e-13 79.7 96 43.8
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 1.0e-12 79.3 56 75.0
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 8.8e-12 76.3 45 75.6
Lsat_1_v5_gn_3_32440 Lactuca sativa HOM05D006362 ORTHO05D228842 7.7e-08 63.2 85 49.4
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 7.7e-08 63.2 97 39.2
SMO014G0021 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.7e-07 62.0 175 33.7
SMO118G0508 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 2.2e-07 61.6 208 28.8
Cpa.g.sc131.91 Carica papaya HOM05D006362 ORTHO05D116658 3.8e-07 60.8 36 77.8
SMO009G0006 Selaginella moellendorffii HOM05D013632 ORTHO05D379378 8.5e-07 59.7 140 34.3


User provided reference genes

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