Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019683.1 Olea europaea HOM05D000285 ORTHO05D023329 3.5e-122 441.8 254 100.0
Oeu019685.1 Olea europaea HOM05D000285 ORTHO05D023329 3.2e-67 259.2 157 87.9
Oeu019684.1 Olea europaea HOM05D000285 ORTHO05D023329 1.7e-47 193.7 126 82.5
Lj6A623T39 Lonicera japonica HOM05D000285 ORTHO05D000241 3.0e-28 129.8 252 42.9
Dinv29818 Davidia involucrata HOM05D000285 ORTHO05D000241 3.3e-27 126.3 268 39.2
Oeu059401.4 Olea europaea HOM05D000285 ORTHO05D000241 3.3e-27 126.3 254 40.2
Peaxi162Scf00033g02835 Petunia axillaris HOM05D000285 ORTHO05D000241 5.6e-27 125.6 260 39.6
Thecc.04G261600 Theobroma cacao HOM05D000285 ORTHO05D000241 7.3e-27 125.2 108 65.7
Glyma.10G189500 Glycine max HOM05D000285 ORTHO05D000241 2.8e-26 123.2 269 38.3
Actinidia20829 Actinidia chinensis HOM05D000285 ORTHO05D000241 1.1e-25 121.3 257 43.2
Phvul.008G158124 Phaseolus vulgaris HOM05D000285 ORTHO05D000241 3.1e-25 119.8 265 41.5
EL10Ac3g04959 Beta vulgaris HOM05D000285 ORTHO05D000241 5.2e-25 119.0 153 50.3
MD13G1219200 Malus domestica HOM05D000285 ORTHO05D000241 2.0e-24 117.1 263 39.5
Haze_11443 Corylus avellana HOM05D000285 ORTHO05D000241 4.4e-24 115.9 264 36.7
vmacro08537 Vaccinium macrocarpon HOM05D000285 ORTHO05D000241 9.9e-24 114.8 253 44.3
Nitab4.5_0001051g0150 Nicotiana tabacum HOM05D000285 ORTHO05D000241 2.2e-23 113.6 254 38.6
CSS0014931 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D000241 1.1e-22 111.3 252 42.9
Lalb_Chr06g0169461 Lupinus albus HOM05D000285 ORTHO05D000241 1.9e-22 110.5 187 42.8
Rhsim04G0173800 Rhododendron simsii HOM05D000285 ORTHO05D000241 1.9e-22 110.5 236 39.4
Dinv27094 Davidia involucrata HOM05D000285 ORTHO05D000241 2.4e-22 110.2 242 42.6
CiPaw.01G179600 Carya illinoinensis HOM05D000285 ORTHO05D000241 4.2e-22 109.4 107 54.2
Potri.008G170400 Populus trichocarpa HOM05D000285 ORTHO05D000241 3.5e-21 106.3 258 36.0
CiPaw.04G188900 Carya illinoinensis HOM05D000285 ORTHO05D000241 1.3e-20 104.4 251 37.5
FvH4_4g04320 Fragaria vesca HOM05D000285 ORTHO05D000241 2.3e-20 103.6 253 39.5
FAN12G1627 Fragaria x ananassa HOM05D000285 ORTHO05D000241 2.3e-20 103.6 253 39.5
QL06p020678 Quercus lobata HOM05D000285 ORTHO05D000241 2.3e-20 103.6 264 37.1
Gohir.A02G042100 Gossypium hirsutum HOM05D000285 ORTHO05D000241 3.0e-20 103.2 256 43.8
VMungo0720G3095 Vigna mungo HOM05D000285 ORTHO05D000241 6.6e-20 102.1 262 35.5
FAN17G1612 Fragaria x ananassa HOM05D000285 ORTHO05D000241 8.7e-20 101.7 253 36.8
FAN22G0981 Fragaria x ananassa HOM05D000285 ORTHO05D000241 1.1e-19 101.3 253 38.3
CsaV3_3G028220 Cucumis sativus L. HOM05D000285 ORTHO05D000241 5.6e-19 99.0 274 35.4
GSVIVG01027891001 Vitis vinifera HOM05D000285 ORTHO05D000241 7.3e-19 98.6 81 61.7
Lalb_Chr03g0037021 Lupinus albus HOM05D000285 ORTHO05D000241 1.3e-18 97.8 115 48.7
TAR365G0858 Trochodendron aralioides HOM05D000285 ORTHO05D000241 1.3e-18 97.8 269 37.5
CSS0036661 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D000241 2.8e-18 96.7 255 44.3
MELO3C012850.2 Cucumis melo HOM05D000285 ORTHO05D000241 4.8e-18 95.9 206 41.3
HPP92_008543 Vanilla planifolia HOM05D000285 ORTHO05D000241 4.8e-18 95.9 180 40.6
CiPaw.02G108200 Carya illinoinensis HOM05D000285 ORTHO05D000241 1.1e-17 94.7 116 46.6
arahy.Tifrunner.gnm1.ann1.238S0K Arachis hypogaea HOM05D000285 ORTHO05D000241 5.3e-17 92.4 72 61.1
arahy.Tifrunner.gnm1.ann1.Q4QJ82 Arachis hypogaea HOM05D000285 ORTHO05D000241 5.3e-17 92.4 72 61.1
Lalb_Chr24g0401281 Lupinus albus HOM05D000285 ORTHO05D000241 5.3e-17 92.4 256 33.6
Manes.03G160600 Manihot esculenta HOM05D000285 ORTHO05D000241 6.9e-17 92.0 188 39.9
Medtr1g073690 Medicago truncatula HOM05D000285 ORTHO05D000241 6.9e-17 92.0 257 36.2
Prupe.1G045900 Prunus persica HOM05D000285 ORTHO05D000241 6.9e-17 92.0 251 42.6
ECA236G0472 Erigeron canadensis HOM05D000285 ORTHO05D000241 1.2e-16 91.3 219 37.0
Sabra08G0130300 Salix brachista HOM05D000285 ORTHO05D000241 1.2e-16 91.3 258 34.1
Ca_09808_v3 Cicer arietinum L. HOM05D000285 ORTHO05D000241 2.0e-16 90.5 266 35.0
Ca_30489_v3 Cicer arietinum L. HOM05D000285 ORTHO05D000241 2.0e-16 90.5 266 35.0
RcHm_v2.0_Chr4g0394771 Rosa chinensis HOM05D000285 ORTHO05D000241 2.0e-16 90.5 255 38.8
Glyma.20G201300 Glycine max HOM05D000285 ORTHO05D000241 4.5e-16 89.4 263 35.0
Potri.014G195300 Populus trichocarpa HOM05D000285 ORTHO05D000241 5.8e-16 89.0 235 40.4
TWI53G1794 Tripterygium wilfordii HOM05D000285 ORTHO05D000241 5.8e-16 89.0 265 38.1
Rhsim02G0042700 Rhododendron simsii HOM05D000285 ORTHO05D000241 9.9e-16 88.2 261 36.0
Lalb_Chr19g0128461 Lupinus albus HOM05D000285 ORTHO05D000241 1.7e-15 87.4 257 36.6
HPP92_022506 Vanilla planifolia HOM05D000285 ORTHO05D000241 2.2e-15 87.0 235 34.9
Actinidia39918 Actinidia chinensis HOM05D000285 ORTHO05D023329 4.9e-15 85.9 174 39.7
vmacro15469 Vaccinium macrocarpon HOM05D000285 ORTHO05D000241 4.9e-15 85.9 245 36.7
ClCG07G001290 Citrullus lanatus HOM05D000285 ORTHO05D000241 6.4e-15 85.5 246 34.6
TPR.G28840 Trifolium pratense HOM05D000285 ORTHO05D000241 6.4e-15 85.5 261 34.9
Carub.0004s1504 Capsella rubella HOM05D000285 ORTHO05D000241 8.4e-15 85.1 183 40.4
Dinv36442 Davidia involucrata HOM05D000285 ORTHO05D179100 8.4e-15 85.1 61 67.2
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-14 84.7 233 36.9
Migut.G00491 Erythranthe guttata HOM05D000285 ORTHO05D000241 1.4e-14 84.3 122 54.1
HPP92_022499 Vanilla planifolia HOM05D000285 ORTHO05D000241 1.4e-14 84.3 258 34.1
Prupe.8G218100 Prunus persica HOM05D000285 ORTHO05D000241 2.4e-14 83.6 201 36.8
TWI09G0164 Tripterygium wilfordii HOM05D000285 ORTHO05D000241 4.2e-14 82.8 118 45.8
Ciclev10004941m.g Citrus clementina HOM05D000285 ORTHO05D000241 5.4e-14 82.4 107 45.8
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.4e-14 82.4 238 32.8
HanXRQChr02g0059341 Helianthus annuus HOM05D000285 ORTHO05D000241 7.1e-14 82.0 254 33.5
Eucgr.H00136 Eucalyptus grandis HOM05D000285 ORTHO05D000241 9.3e-14 81.6 239 37.7
Sed0020816 Sechium edule HOM05D000285 ORTHO05D000241 1.6e-13 80.9 117 54.7
Lj5g0003393 Lotus japonicus HOM05D000285 ORTHO05D000241 2.7e-13 80.1 149 39.6
SGA_v2.0_scaffold67G22707 Striga asiatica HOM05D000285 ORTHO05D000241 3.5e-13 79.7 108 61.1
Gorai.005G053000 Gossypium raimondii HOM05D000285 ORTHO05D000241 4.6e-13 79.3 254 40.6
Sed0002121 Sechium edule HOM05D000285 ORTHO05D000241 4.6e-13 79.3 257 35.8
Ah.13g072260 Amaranthus hybridus HOM05D000285 ORTHO05D000241 6.0e-13 79.0 65 63.1
Atru.chr4.1931 Acer truncatum HOM05D000285 ORTHO05D000241 7.9e-13 78.6 111 45.0
arahy.Tifrunner.gnm1.ann1.B4IEQF Arachis hypogaea HOM05D000285 ORTHO05D000241 7.9e-13 78.6 268 32.5
FAN17G0357 Fragaria x ananassa HOM05D000285 ORTHO05D000241 1.8e-12 77.4 224 33.9
EL10Ac3g04958 Beta vulgaris HOM05D000285 ORTHO05D000241 2.3e-12 77.0 177 38.4
Nn1g02912 Nelumbo nucifera HOM05D000285 ORTHO05D000241 3.0e-12 76.6 255 32.2
Carub.0007s2801 Capsella rubella HOM05D000285 ORTHO05D000241 3.9e-12 76.3 169 39.6
Potri.002G258600 Populus trichocarpa HOM05D000285 ORTHO05D000241 3.9e-12 76.3 227 36.1
Aa31LG5G3880 Aethionema arabicum HOM05D000285 ORTHO05D000241 6.7e-12 75.5 220 41.4
Aqoxy5G00169 Aquilegia oxysepala HOM05D000285 ORTHO05D000241 6.7e-12 75.5 60 61.7
QL09p040974 Quercus lobata HOM05D000285 ORTHO05D000241 6.7e-12 75.5 176 36.9
Ah.13g072280 Amaranthus hybridus HOM05D000285 ORTHO05D000241 8.7e-12 75.1 232 36.2
CiPaw.03G268700 Carya illinoinensis HOM05D000285 ORTHO05D000241 1.1e-11 74.7 192 36.5
Gohir.D02G047700 Gossypium hirsutum HOM05D000285 ORTHO05D000241 2.5e-11 73.6 234 40.6
Manes.15G044100 Manihot esculenta HOM05D000285 ORTHO05D000241 3.3e-11 73.2 169 37.9
FAN24G1103 Fragaria x ananassa HOM05D000285 ORTHO05D000241 5.6e-11 72.4 241 31.5
SGA_v2.0_scaffold179G39589 Striga asiatica HOM05D000285 ORTHO05D000241 5.6e-11 72.4 214 41.6
FvH4_2g20810 Fragaria vesca HOM05D000285 ORTHO05D000241 7.4e-11 72.0 241 31.5
Hund27525 Selenicereus undatus HOM05D000285 ORTHO05D000241 7.4e-11 72.0 172 37.8
Hund27532 Selenicereus undatus HOM05D000285 ORTHO05D000241 7.4e-11 72.0 172 37.8
unitig_578.g16403 Utricularia gibba HOM05D000285 ORTHO05D000241 1.3e-10 71.2 253 38.3
Thhalv10025365m.g Eutrema salsugineum HOM05D000285 ORTHO05D000241 1.6e-10 70.9 216 45.4
Lj3A676G49 Lonicera japonica HOM05D000285 ORTHO05D000241 2.1e-10 70.5 241 35.7
TAR362G0502 Trochodendron aralioides HOM05D000285 ORTHO05D022877 2.1e-10 70.5 272 30.5
Gohir.A02G041800 Gossypium hirsutum HOM05D000285 ORTHO05D000241 2.8e-10 70.1 244 40.2
FAN24G1418 Fragaria x ananassa HOM05D000285 ORTHO05D000241 3.6e-10 69.7 238 32.8
Gohir.D02G047500 Gossypium hirsutum HOM05D000285 ORTHO05D000241 3.6e-10 69.7 244 40.6
Gorai.005G052700 Gossypium raimondii HOM05D000285 ORTHO05D000241 3.6e-10 69.7 244 40.6
Ciclev10020365m.g Citrus clementina HOM05D000285 ORTHO05D000241 4.8e-10 69.3 248 31.5
TAR636G1154 Trochodendron aralioides HOM05D000285 ORTHO05D000241 4.8e-10 69.3 117 40.2
Dinv16384 Davidia involucrata HOM05D000285 ORTHO05D000241 6.2e-10 68.9 163 38.7
FAN15G1588 Fragaria x ananassa HOM05D000285 ORTHO05D000241 6.2e-10 68.9 231 30.3
Sc25g0003610 Simmondsia chinensis HOM05D000285 ORTHO05D000241 6.2e-10 68.9 247 33.2
Sopen03g001690 Solanum pennellii HOM05D000285 ORTHO05D000241 8.1e-10 68.6 49 71.4
FAN20G1069 Fragaria x ananassa HOM05D000285 ORTHO05D000241 1.1e-09 68.2 233 30.5
arahy.Tifrunner.gnm1.ann1.B625T0 Arachis hypogaea HOM05D000285 ORTHO05D000241 1.4e-09 67.8 268 32.1
Nitab4.5_0002709g0060 Nicotiana tabacum HOM05D000285 ORTHO05D000241 1.4e-09 67.8 277 31.4
MD05G1191700 Malus domestica HOM05D000285 ORTHO05D000241 1.8e-09 67.4 238 29.4
Oeu055252.1 Olea europaea HOM05D000285 ORTHO05D000241 1.8e-09 67.4 240 41.2
AL4G29080 Arabidopsis lyrata HOM05D000285 ORTHO05D000241 2.4e-09 67.0 191 44.0
Zm00001eb046160 Zea mays HOM05D000285 ORTHO05D000241 2.4e-09 67.0 152 46.7
CANSAT01G2671 Cannabis sativa HOM05D000285 ORTHO05D000241 5.3e-09 65.9 230 37.0
TAR633G0795 Trochodendron aralioides HOM05D000285 ORTHO05D000241 5.3e-09 65.9 256 34.0
Psat6g133520 Pisum sativum HOM05D000285 ORTHO05D000241 1.2e-08 64.7 241 30.7
AT4G14300 Arabidopsis thaliana HOM05D000285 ORTHO05D000241 2.6e-08 63.5 207 38.2
FAN27G1061 Fragaria x ananassa HOM05D000285 ORTHO05D000241 3.4e-08 63.2 221 30.8
Atru.chr5.1807 Acer truncatum HOM05D000285 ORTHO05D000241 7.6e-08 62.0 52 59.6
Actinidia37542 Actinidia chinensis HOM05D000285 ORTHO05D000241 7.6e-08 62.0 75 46.7
AUR62002178 Chenopodium quinoa HOM05D000285 ORTHO05D000241 9.9e-08 61.6 127 44.9
Migut.G00490 Erythranthe guttata HOM05D000285 ORTHO05D000241 9.9e-08 61.6 200 38.5
Aqoxy2G03722 Aquilegia oxysepala HOM05D000285 ORTHO05D000241 1.7e-07 60.8 219 34.7
Nn3g19745 Nelumbo nucifera HOM05D000285 ORTHO05D000241 1.7e-07 60.8 190 33.2
Actinidia30136 Actinidia chinensis HOM05D000285 ORTHO05D000241 2.2e-07 60.5 185 35.7
BcaC02g07827 Brassica carinata HOM05D000285 ORTHO05D000241 2.2e-07 60.5 60 60.0
Hund03076 Selenicereus undatus HOM05D000285 ORTHO05D000241 2.2e-07 60.5 236 39.4
CSS0005315 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D000241 4.9e-07 59.3 167 34.1
CSS0013663 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D000241 4.9e-07 59.3 167 34.1
C03p21880 Brassica napus HOM05D000285 ORTHO05D000241 8.4e-07 58.5 227 37.4
BolC3t14570H Brassica oleracea HOM05D000285 ORTHO05D000241 8.4e-07 58.5 227 37.4
RcHm_v2.0_Chr6g0287221 Rosa chinensis HOM05D000285 ORTHO05D000241 8.4e-07 58.5 233 29.6
THA.LOC104801074 Tarenaya hassleriana HOM05D000285 ORTHO05D000241 1.4e-06 57.8 56 60.7
Cc03_g05990 Coffea canephora HOM05D000285 ORTHO05D000241 1.9e-06 57.4 110 39.1
Potri.010G067500 Populus trichocarpa HOM05D000285 ORTHO05D000241 1.9e-06 57.4 190 33.7
PGSC0003DMG400013456 Solanum tuberosum HOM05D000285 ORTHO05D000241 3.2e-06 56.6 134 38.1
FAN01G2838 Fragaria x ananassa HOM05D000285 ORTHO05D023329 4.2e-06 56.2 100 47.0
Sabra10G0040000 Salix brachista HOM05D000285 ORTHO05D000241 4.2e-06 56.2 265 33.2
PGSC0003DMG400017156 Solanum tuberosum HOM05D000285 ORTHO05D000241 5.5e-06 55.8 273 29.7
TAR636G3120 Trochodendron aralioides HOM05D032810 ORTHO05D037805 5.5e-06 55.8 199 29.1
A03p18720 Brassica napus HOM05D000285 ORTHO05D000241 7.1e-06 55.5 162 42.0
Thhalv10016750m.g Eutrema salsugineum HOM05D000285 ORTHO05D000241 9.3e-06 55.1 191 40.8
Sp7g12310 Schrenkiella parvula HOM05D000285 ORTHO05D000241 9.3e-06 55.1 224 32.1


User provided reference genes

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