Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 6.5e-296 1020.0 523 100.0
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 8.2e-190 667.5 541 68.9
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 1.0e-187 660.6 532 68.2
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 3.5e-185 652.1 537 67.8
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 3.7e-182 642.1 524 67.4
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 6.3e-182 641.3 524 67.6
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 6.3e-182 641.3 523 68.1
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 1.4e-181 640.2 527 68.9
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 1.8e-181 639.8 524 66.4
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 2.6e-180 636.0 527 66.0
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 6.5e-179 631.3 525 65.9
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 5.5e-178 628.2 525 66.9
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 1.2e-177 627.1 530 66.0
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 2.3e-176 622.9 529 65.8
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 2.3e-176 622.9 523 66.0
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 1.3e-174 617.1 523 64.6
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 1.3e-174 617.1 525 65.1
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 6.3e-174 614.8 524 66.8
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 2.4e-173 612.8 524 66.8
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 2.4e-173 612.8 524 66.4
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 2.4e-173 612.8 536 65.1
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 3.1e-173 612.5 525 64.4
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 3.1e-173 612.5 522 64.9
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 4.1e-173 612.1 530 64.9
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 6.9e-173 611.3 566 62.0
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 1.2e-172 610.5 506 67.8
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 2.0e-172 609.8 523 65.4
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 2.0e-172 609.8 520 65.4
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 2.0e-172 609.8 523 64.8
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 3.4e-172 609.0 529 64.5
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 5.9e-172 608.2 532 63.9
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 2.9e-171 605.9 523 63.5
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 3.8e-171 605.5 532 63.5
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 5.0e-171 605.1 444 72.7
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 5.0e-171 605.1 544 63.2
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 8.5e-171 604.4 523 64.2
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 1.1e-170 604.0 523 65.2
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 3.2e-170 602.4 539 63.8
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 5.5e-170 601.7 524 63.4
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 9.4e-170 600.9 523 65.2
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 9.4e-170 600.9 524 63.5
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 1.2e-169 600.5 528 63.8
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.6e-169 600.1 523 63.3
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 2.3e-168 596.3 523 63.5
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 3.0e-168 595.9 526 62.7
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 3.0e-168 595.9 526 62.7
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 1.1e-167 594.0 536 62.3
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 1.5e-167 593.6 547 61.1
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 2.0e-167 593.2 528 62.7
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 2.6e-167 592.8 524 62.8
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.3e-167 592.4 528 61.6
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 4.4e-167 592.0 526 62.2
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 7.4e-167 591.3 523 61.8
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 7.4e-167 591.3 538 62.1
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 7.4e-167 591.3 523 62.3
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 9.7e-167 590.9 524 62.6
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 2.2e-166 589.7 523 62.1
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 2.8e-166 589.3 523 61.4
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 2.8e-166 589.3 523 63.1
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 3.7e-166 589.0 519 63.8
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.4e-165 587.0 523 61.4
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 1.4e-165 587.0 529 62.6
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 1.4e-165 587.0 529 62.4
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 2.4e-165 586.3 529 62.4
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 3.1e-165 585.9 524 61.8
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 9.1e-165 584.3 523 62.9
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 1.5e-164 583.6 524 63.4
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 2.0e-164 583.2 523 62.3
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 7.7e-164 581.3 524 62.0
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 3.8e-163 578.9 526 62.0
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 8.5e-163 577.8 551 60.8
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 3.2e-162 575.9 527 61.1
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 4.2e-162 575.5 524 61.6
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 7.2e-162 574.7 524 61.6
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 9.4e-162 574.3 512 61.5
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 9.4e-162 574.3 523 63.1
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 1.2e-161 573.9 525 61.0
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.6e-161 573.5 536 62.7
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 4.7e-161 572.0 520 61.2
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 4.7e-161 572.0 520 61.2
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 8.0e-161 571.2 555 60.0
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 2.3e-160 569.7 444 67.8
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 3.0e-160 569.3 528 61.0
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 3.0e-160 569.3 522 62.6
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 3.9e-160 568.9 524 60.5
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 1.5e-159 567.0 508 60.6
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 2.6e-159 566.2 414 72.0
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 7.4e-159 564.7 524 60.5
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 1.7e-158 563.5 483 64.6
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 8.2e-158 561.2 523 59.7
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 8.2e-158 561.2 434 68.4
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 1.4e-157 560.5 523 61.4
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 5.3e-157 558.5 523 59.7
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 7.0e-157 558.1 523 60.2
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 1.6e-156 557.0 523 62.0
DCAR_011737 Daucus carota HOM05D004480 ORTHO05D005546 2.0e-156 556.6 571 57.8
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 2.9e-155 552.7 524 59.2
FvH4_7g06440 Fragaria vesca HOM05D004480 ORTHO05D005546 2.9e-155 552.7 420 67.6
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 8.5e-155 551.2 523 58.9
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 4.2e-154 548.9 519 59.3
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 1.2e-153 547.4 593 55.0
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 5.2e-152 542.0 379 72.8
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 5.2e-152 542.0 525 59.4
ATR0743G007 Amborella trichopoda HOM05D004480 ORTHO05D005546 1.5e-151 540.4 527 57.3
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.7e-150 535.8 512 59.2
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 5.3e-149 531.9 530 57.9
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 5.3e-149 531.9 529 58.8
AT3G51270 Arabidopsis thaliana HOM05D004480 ORTHO05D005546 1.2e-148 530.8 524 57.8
Os01g0888700 Oryza sativa ssp. japonica HOM05D004480 ORTHO05D005546 7.7e-148 528.1 543 56.0
PSO675G8718 Papaver somniferum HOM05D004480 ORTHO05D005546 1.7e-147 526.9 527 58.8
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 2.2e-147 526.6 539 57.1
Cpa.g.sc9.237 Carica papaya HOM05D004480 ORTHO05D005546 2.9e-147 526.2 525 58.9
PSO732G0488 Papaver somniferum HOM05D004480 ORTHO05D005546 8.5e-147 524.6 527 58.6
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 4.2e-146 522.3 486 60.9
Oeu061379.1 Olea europaea HOM05D004480 ORTHO05D005546 4.7e-145 518.8 321 82.9
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 6.1e-145 518.5 411 69.1
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 8.0e-145 518.1 512 57.0
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 1.0e-144 517.7 492 61.0
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 3.0e-144 516.2 556 55.8
Zm00001eb145320 Zea mays HOM05D004480 ORTHO05D005546 1.5e-143 513.8 532 55.3
Zm00001eb365940 Zea mays HOM05D004480 ORTHO05D005546 9.8e-143 511.1 541 54.3
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 2.2e-142 510.0 519 56.5
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 3.7e-142 509.2 512 55.5
BcaC09g50090 Brassica carinata HOM05D004480 ORTHO05D005546 5.4e-141 505.4 505 56.6
Lju124A7T24 Lonicera japonica HOM05D004480 ORTHO05D005546 1.5e-138 497.3 326 76.1
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 1.2e-137 494.2 524 55.2
SMO203G0211 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 3.7e-134 482.6 379 65.4
Aqoxy2G00126 Aquilegia oxysepala HOM05D004480 ORTHO05D005546 2.1e-129 466.8 547 51.0
Pp3c20_22360 Physcomitrium patens HOM05D004480 ORTHO05D005546 3.0e-128 463.0 516 52.9
CDE02G2467 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.3e-126 457.6 518 51.9
CDE09G0719 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 3.2e-125 453.0 458 57.0
AagrBONN_evm.TU.Sc2ySwM_228.3019 Anthoceros agrestis HOM05D004480 ORTHO05D005546 5.4e-125 452.2 376 61.4
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 1.1e-122 444.5 379 62.0
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 8.0e-121 438.3 472 55.5
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.5e-119 434.1 610 46.6
CBR_g22944 Chara braunii HOM05D004480 ORTHO05D005546 5.4e-117 425.6 324 64.2
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.9e-114 417.2 498 52.2
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.2e-113 414.5 406 56.4
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 3.2e-109 399.8 527 49.1
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.6e-108 397.5 491 51.3
SEGI_41177 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 3.8e-102 376.3 387 57.1
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 7.8e-100 368.6 454 49.3
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 1.4e-96 357.8 400 50.2
MCO09G317 Micromonas commoda HOM05D004480 ORTHO05D005546 6.4e-94 349.0 384 50.5
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 3.9e-75 286.6 523 40.0
Cre03.g159900 Chlamydomonas reinhardtii HOM05D004480 ORTHO05D005546 2.5e-74 283.9 267 55.1
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 7.9e-52 209.1 204 63.7
Ciclev10020879m.g Citrus clementina HOM05D004480 ORTHO05D005546 5.1e-51 206.5 404 39.6
Cfa009489 Carpinus fangiana HOM05D004480 ORTHO05D005546 1.3e-46 191.8 428 33.2
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 4.5e-39 166.8 180 54.4
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 4.2e-37 160.2 248 46.0
SMO327G0006 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 4.8e-33 146.7 167 52.7
Zm00001eb233680 Zea mays HOM05D009386 ORTHO05D011419 2.1e-28 131.3 177 46.9
SEGI_14248 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 2.0e-23 114.8 128 50.0
Zm00001eb011520 Zea mays HOM05D009386 ORTHO05D011419 1.8e-19 101.7 151 43.7
Zm00001eb393850 Zea mays HOM05D009386 ORTHO05D011419 1.5e-18 98.6 165 43.0
FAN07G0363 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.4e-18 97.1 204 40.7
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 7.5e-18 96.3 216 40.3
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.9e-09 67.8 195 27.2
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 3.7e-09 67.4 199 26.6
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.7e-09 67.4 199 26.6
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 8.3e-09 66.2 205 27.3
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 1.9e-08 65.1 254 25.6
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 5.4e-08 63.5 254 25.6
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 9.2e-08 62.8 239 26.4
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 1.2e-07 62.4 199 24.6
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 1.0e-06 59.3 315 23.8
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 1.0e-06 59.3 193 24.9


User provided reference genes

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