Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018086.1 Olea europaea HOM05D000008 ORTHO05D000005 2.1e-85 318.9 157 100.0
Oeu006574.1 Olea europaea HOM05D000008 ORTHO05D000005 3.1e-52 208.8 165 68.5
Oeu063174.1 Olea europaea HOM05D000008 ORTHO05D000005 1.1e-25 120.6 182 46.7
Oeu047574.1 Olea europaea HOM05D000008 ORTHO05D000005 1.5e-22 110.2 182 42.9
Peaxi162Scf00428g00117 Petunia axillaris HOM05D000008 ORTHO05D000005 5.7e-22 108.2 198 37.9
Nitab4.5_0000634g0210 Nicotiana tabacum HOM05D000008 ORTHO05D000005 3.7e-21 105.5 189 40.2
Dinv09358 Davidia involucrata HOM05D000008 ORTHO05D000005 4.8e-21 105.1 176 39.8
Dinv43447 Davidia involucrata HOM05D000008 ORTHO05D000005 4.1e-20 102.1 174 43.1
MSTRG.17033 Avicennia marina HOM05D000008 ORTHO05D000005 2.9e-18 95.9 174 40.8
Nitab4.5_0001186g0080 Nicotiana tabacum HOM05D000008 ORTHO05D000005 3.8e-18 95.5 190 37.9
Sopen01g034190 Solanum pennellii HOM05D000008 ORTHO05D000005 3.8e-18 95.5 207 37.7
CSS0030586 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 5.0e-18 95.1 174 40.2
CSS0045918 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 5.0e-18 95.1 174 40.2
QL04p006651 Quercus lobata HOM05D000008 ORTHO05D000005 1.1e-17 94.0 171 36.8
SalBow5G4456 Salvia bowleyana HOM05D000008 ORTHO05D000005 1.5e-17 93.6 174 40.2
PGSC0003DMG400006868 Solanum tuberosum HOM05D000008 ORTHO05D000005 2.5e-17 92.8 208 36.1
Potri.001G267300 Populus trichocarpa HOM05D000008 ORTHO05D000005 5.5e-17 91.7 180 36.1
Solyc01g087130.4 Solanum lycopersicum HOM05D000008 ORTHO05D000005 5.5e-17 91.7 209 36.8
Cc02_g27930 Coffea canephora HOM05D000008 ORTHO05D000005 9.5e-17 90.9 182 35.7
CAN.G1560.5 Capsicum annuum HOM05D000008 ORTHO05D000005 2.8e-16 89.4 204 37.7
Actinidia31061 Actinidia chinensis HOM05D000008 ORTHO05D000005 3.6e-16 89.0 161 40.4
Thecc.01G411200 Theobroma cacao HOM05D000008 ORTHO05D000005 6.1e-16 88.2 177 37.3
Duzib268G0088 Durio zibethinus HOM05D000008 ORTHO05D000005 1.4e-15 87.0 170 33.5
Haze_03210 Corylus avellana HOM05D000008 ORTHO05D000005 1.8e-15 86.7 180 33.3
Lj9C631T14 Lonicera japonica HOM05D000008 ORTHO05D000005 2.3e-15 86.3 167 38.9
Actinidia20667 Actinidia chinensis HOM05D000008 ORTHO05D000005 6.8e-15 84.7 166 35.5
Duzib138G1472 Durio zibethinus HOM05D000008 ORTHO05D000005 1.5e-14 83.6 179 35.8
Lsat_1_v5_gn_1_106980 Lactuca sativa HOM05D000008 ORTHO05D000005 1.5e-14 83.6 185 33.0
GSVIVG01032088001 Vitis vinifera HOM05D000008 ORTHO05D000005 2.0e-14 83.2 175 34.3
Sabra09G0045400 Salix brachista HOM05D000008 ORTHO05D000005 3.4e-14 82.4 181 31.5
Glyma.12G237500 Glycine max HOM05D000008 ORTHO05D000005 7.5e-14 81.3 172 33.7
TAR623G1002 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.7e-13 80.1 174 33.3
Glyma.13G203100 Glycine max HOM05D000008 ORTHO05D000005 4.9e-13 78.6 169 34.3
TAR369G0062 Trochodendron aralioides HOM05D000008 ORTHO05D000005 6.3e-13 78.2 162 36.4
Manes.10G143200 Manihot esculenta HOM05D000008 ORTHO05D000005 1.8e-12 76.6 196 33.2
Potri.009G061500 Populus trichocarpa HOM05D000008 ORTHO05D000005 1.8e-12 76.6 187 33.7
Manes.07G005800 Manihot esculenta HOM05D000008 ORTHO05D000005 3.1e-12 75.9 206 30.6
Duzib133G0227 Durio zibethinus HOM05D000008 ORTHO05D000005 5.4e-12 75.1 162 35.8
Phvul.004G046000 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 7.0e-12 74.7 189 33.9
TAR633G1043 Trochodendron aralioides HOM05D000008 ORTHO05D000005 7.0e-12 74.7 168 33.3
Ciclev10033941m.g Citrus clementina HOM05D000008 ORTHO05D000005 1.2e-11 73.9 152 32.9
DCAR_003210 Daucus carota HOM05D000008 ORTHO05D000005 2.0e-11 73.2 169 33.7
Nn2g15386 Nelumbo nucifera HOM05D000008 ORTHO05D000005 2.0e-11 73.2 190 32.1
HanXRQChr16g0524511 Helianthus annuus HOM05D000008 ORTHO05D000005 2.7e-11 72.8 172 33.1
CiPaw.13G004700 Carya illinoinensis HOM05D000008 ORTHO05D000005 3.5e-11 72.4 172 32.6
VMungo0464G0324 Vigna mungo HOM05D000008 ORTHO05D000005 3.5e-11 72.4 194 34.0
GSVIVG01025269001 Vitis vinifera HOM05D000008 ORTHO05D000005 4.5e-11 72.0 165 35.8
Lalb_Chr03g0034061 Lupinus albus HOM05D000008 ORTHO05D000005 1.0e-10 70.9 177 32.2
Aqoxy2G00122 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 1.3e-10 70.5 173 35.3
Gohir.A08G144600 Gossypium hirsutum HOM05D000008 ORTHO05D000005 2.3e-10 69.7 182 34.1
ECA248G1412 Erigeron canadensis HOM05D000008 ORTHO05D000005 2.9e-10 69.3 137 35.0
ECA234G2397 Erigeron canadensis HOM05D000008 ORTHO05D000005 3.8e-10 68.9 181 33.1
Gorai.004G172700 Gossypium raimondii HOM05D000008 ORTHO05D000005 5.0e-10 68.6 187 34.2
Gohir.D08G038800 Gossypium hirsutum HOM05D000008 ORTHO05D000005 1.1e-09 67.4 169 30.2
Gorai.004G037300 Gossypium raimondii HOM05D000008 ORTHO05D000005 1.1e-09 67.4 169 30.2
Gohir.A08G028000 Gossypium hirsutum HOM05D000008 ORTHO05D000005 1.5e-09 67.0 169 30.2
Gohir.D08G165600 Gossypium hirsutum HOM05D000008 ORTHO05D000005 1.5e-09 67.0 187 33.7
SGA_v2.0_scaffold167G38401 Striga asiatica HOM05D000008 ORTHO05D000005 1.5e-09 67.0 134 38.8
Glyma.13G050400 Glycine max HOM05D000008 ORTHO05D000005 1.9e-09 66.6 191 31.4
Lsat_1_v5_gn_4_31661 Lactuca sativa HOM05D000008 ORTHO05D000005 2.5e-09 66.2 186 30.6
Eucgr.G03385 Eucalyptus grandis HOM05D000008 ORTHO05D000005 4.3e-09 65.5 175 33.7
TPR.G12180 Trifolium pratense HOM05D000008 ORTHO05D000005 4.3e-09 65.5 192 29.2
Psat5g207440 Pisum sativum HOM05D000008 ORTHO05D000005 5.6e-09 65.1 199 27.1
Nn7g36193 Nelumbo nucifera HOM05D000008 ORTHO05D000005 7.3e-09 64.7 189 29.6
Glyma.19G038100 Glycine max HOM05D000008 ORTHO05D000005 1.6e-08 63.5 182 31.3
Dinv36264 Davidia involucrata HOM05D000008 ORTHO05D000005 2.1e-08 63.2 147 29.3
Medtr3g028740 Medicago truncatula HOM05D000008 ORTHO05D000005 2.1e-08 63.2 197 28.4
vmacro21186 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 2.8e-08 62.8 111 34.2
Hma1.2p1_1190F.1_g265400 Hydrangea macrophylla HOM05D000008 ORTHO05D000005 6.1e-08 61.6 168 29.2
Rhsim13G0221600 Rhododendron simsii HOM05D000008 ORTHO05D000005 1.0e-07 60.8 119 35.3
Lalb_Chr20g0108051 Lupinus albus HOM05D000008 ORTHO05D000005 1.4e-07 60.5 170 29.4
TWI09G1563 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 1.4e-07 60.5 190 31.1
Phvul.011G212000 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 1.8e-07 60.1 168 29.2
TWI53G0584 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 1.8e-07 60.1 168 35.7
Atru.chr11.2660 Acer truncatum HOM05D000008 ORTHO05D000005 5.2e-07 58.5 51 51.0
Actinidia06338 Actinidia chinensis HOM05D000008 ORTHO05D000005 5.2e-07 58.5 160 33.1
Nitab4.5_0005819g0010 Nicotiana tabacum HOM05D000008 ORTHO05D000005 8.9e-07 57.8 179 27.9
Rhsim01G0129400 Rhododendron simsii HOM05D000008 ORTHO05D000005 2.0e-06 56.6 161 34.8
Actinidia23969 Actinidia chinensis HOM05D000008 ORTHO05D000005 4.4e-06 55.5 153 28.8
vmacro04158 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 4.4e-06 55.5 121 37.2
TAR636G2544 Trochodendron aralioides HOM05D000008 ORTHO05D000005 5.8e-06 55.1 160 31.9
CAN.G1496.2 Capsicum annuum HOM05D000008 ORTHO05D000005 7.5e-06 54.7 49 44.9
Lj3g0012577 Lotus japonicus HOM05D000008 ORTHO05D000005 7.5e-06 54.7 197 27.9
AL3G19460 Arabidopsis lyrata HOM05D000008 ORTHO05D000005 9.8e-06 54.3 178 32.0
unitig_0.g1242 Utricularia gibba HOM05D000008 ORTHO05D000005 9.8e-06 54.3 35 65.7


User provided reference genes

Program Settings