Gene: Lsat_1_v5_gn_1_106980

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_106980
  • Transcript Identifier Lsat_1_v5_gn_1_106980.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 154038191-154041709 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_106980.v5
  • pacid 38945208

Descriptions

  • Description PTHR10641:SF640 - TRANSCRIPTION FACTOR MYB46
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G12870
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G12870
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT5G12870
GO:1901348
ISO
PLAZA Integrative Orthologypositive regulation of secondary cell wall biogenesis AT5G12870
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT5G12870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G12870
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G12870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G12870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR001005 SANT/Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)