Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018076.1 Olea europaea HOM05D004132 ORTHO05D006273 9.0e-130 466.8 224 100.0
Migut.D01293 Erythranthe guttata HOM05D004132 ORTHO05D006273 2.2e-104 382.5 191 93.2
Solyc05g056260.2 Solanum lycopersicum HOM05D004132 ORTHO05D006273 2.2e-104 382.5 191 92.7
PGSC0003DMG400023334 Solanum tuberosum HOM05D004132 ORTHO05D006273 2.2e-104 382.5 191 92.7
CAN.G1921.3 Capsicum annuum HOM05D004132 ORTHO05D006273 2.9e-104 382.1 191 92.7
SalBow7G0375 Salvia bowleyana HOM05D004132 ORTHO05D006273 3.8e-104 381.7 191 92.7
Sopen05g034650 Solanum pennellii HOM05D004132 ORTHO05D006273 3.8e-104 381.7 191 92.7
SGA_v2.0_scaffold298G47699 Striga asiatica HOM05D004132 ORTHO05D006273 3.8e-104 381.7 191 93.2
Peaxi162Scf00858g00012 Petunia axillaris HOM05D004132 ORTHO05D006273 2.5e-103 379.0 191 92.1
Hma1.2p1_0325F.1_g126090 Hydrangea macrophylla HOM05D004132 ORTHO05D006273 4.2e-103 378.3 191 91.6
SGA_v2.0_scaffold175G39350 Striga asiatica HOM05D004132 ORTHO05D006273 4.2e-103 378.3 191 91.6
Dinv31163 Davidia involucrata HOM05D004132 ORTHO05D006273 5.5e-103 377.9 191 91.6
Glyma.18G291800 Glycine max HOM05D004132 ORTHO05D006273 2.1e-102 375.9 191 90.6
VMungo1383G0131 Vigna mungo HOM05D004132 ORTHO05D006273 2.7e-102 375.6 191 90.6
Glyma.02G091300 Glycine max HOM05D004132 ORTHO05D006273 4.7e-102 374.8 191 90.6
MSTRG.16365 Avicennia marina HOM05D004132 ORTHO05D006273 6.1e-102 374.4 191 91.1
Dinv25393 Davidia involucrata HOM05D004132 ORTHO05D006273 6.1e-102 374.4 191 90.1
Atru.chr3.3175 Acer truncatum HOM05D004132 ORTHO05D006273 2.3e-101 372.5 191 89.5
TAR627G0383 Trochodendron aralioides HOM05D004132 ORTHO05D018522 3.0e-101 372.1 191 89.0
Cfa000667 Carpinus fangiana HOM05D004132 ORTHO05D006273 4.0e-101 371.7 191 89.5
Os12g0533700 Oryza sativa ssp. japonica HOM05D004132 ORTHO05D006273 4.0e-101 371.7 191 88.5
Phvul.008G010100 Phaseolus vulgaris HOM05D004132 ORTHO05D006273 4.0e-101 371.7 191 89.0
QL04p095526 Quercus lobata HOM05D004132 ORTHO05D006273 4.0e-101 371.7 190 90.0
THA.LOC104826464 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 4.0e-101 371.7 191 89.0
Potri.013G105200 Populus trichocarpa HOM05D004132 ORTHO05D006273 5.2e-101 371.3 191 90.6
Sc08g0001660 Simmondsia chinensis HOM05D004132 ORTHO05D006273 5.2e-101 371.3 191 88.5
THA.LOC104800472 Tarenaya hassleriana HOM05D004132 ORTHO05D006273 6.8e-101 370.9 191 89.0
Cc09_g05560 Coffea canephora HOM05D004132 ORTHO05D006273 1.2e-100 370.2 191 88.5
MBI07_g09898_MAGBIO Magnolia biondii HOM05D004132 ORTHO05D006273 1.2e-100 370.2 191 89.5
GSVIVG01010923001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.2e-100 370.2 191 89.5
Aa31LG10G12860 Aethionema arabicum HOM05D004132 ORTHO05D006273 2.0e-100 369.4 191 90.6
Nn6g34644 Nelumbo nucifera HOM05D004132 ORTHO05D006273 2.0e-100 369.4 191 89.0
CSS0017532 Camellia sinensis var. sinensis HOM05D004132 ORTHO05D006273 2.6e-100 369.0 191 88.5
Cpa.g.sc84.15 Carica papaya HOM05D004132 ORTHO05D006273 2.6e-100 369.0 191 87.4
CiPaw.09G074000 Carya illinoinensis HOM05D004132 ORTHO05D006273 2.6e-100 369.0 191 89.0
Lalb_Chr17g0336121 Lupinus albus HOM05D004132 ORTHO05D006273 2.6e-100 369.0 191 88.5
Lj6g0002780 Lotus japonicus HOM05D004132 ORTHO05D006273 3.4e-100 368.6 191 87.4
DCAR_001290 Daucus carota HOM05D004132 ORTHO05D006273 4.4e-100 368.2 191 87.4
Eucgr.C02274 Eucalyptus grandis HOM05D004132 ORTHO05D006273 7.5e-100 367.5 191 89.0
Sabra13G0090900 Salix brachista HOM05D004132 ORTHO05D006273 7.5e-100 367.5 191 89.5
arahy.Tifrunner.gnm1.ann1.KJS3LB Arachis hypogaea HOM05D004132 ORTHO05D006273 9.8e-100 367.1 191 86.9
arahy.Tifrunner.gnm1.ann1.L32XPY Arachis hypogaea HOM05D004132 ORTHO05D006273 9.8e-100 367.1 191 86.9
Eucgr.C02393 Eucalyptus grandis HOM05D004132 ORTHO05D006273 9.8e-100 367.1 191 88.5
PGR102G2051 Punica granatum HOM05D004132 ORTHO05D006273 1.3e-99 366.7 191 89.0
TAR626G0350 Trochodendron aralioides HOM05D004132 ORTHO05D006273 1.7e-99 366.3 191 87.4
COL.COLO4_20206 Corchorus olitorius HOM05D004132 ORTHO05D006273 2.8e-99 365.5 191 88.0
Lj5g0016492 Lotus japonicus HOM05D004132 ORTHO05D006273 2.8e-99 365.5 191 86.9
Ca_06096_v3 Cicer arietinum L. HOM05D004132 ORTHO05D006273 3.7e-99 365.2 191 86.9
Medtr7g083030 Medicago truncatula HOM05D004132 ORTHO05D006273 3.7e-99 365.2 191 86.9
Psat3g096280 Pisum sativum HOM05D004132 ORTHO05D006273 3.7e-99 365.2 191 87.4
Hund00133 Selenicereus undatus HOM05D004132 ORTHO05D006273 3.7e-99 365.2 191 88.0
Ciclev10011787m.g Citrus clementina HOM05D004132 ORTHO05D006273 1.8e-98 362.8 191 86.9
Gohir.A10G126900 Gossypium hirsutum HOM05D004132 ORTHO05D006273 1.8e-98 362.8 191 87.4
Gorai.011G155000 Gossypium raimondii HOM05D004132 ORTHO05D006273 1.8e-98 362.8 191 87.4
Prupe.4G115500 Prunus persica HOM05D004132 ORTHO05D006273 1.8e-98 362.8 191 86.9
Zm00001eb371320 Zea mays HOM05D004132 ORTHO05D006273 2.4e-98 362.5 191 88.5
PSO063G4358 Papaver somniferum HOM05D004132 ORTHO05D006273 4.1e-98 361.7 191 86.9
PSO421G0604 Papaver somniferum HOM05D004132 ORTHO05D006273 4.1e-98 361.7 191 86.9
HanXRQChr12g0367151 Helianthus annuus HOM05D004132 ORTHO05D006273 5.4e-98 361.3 191 85.9
MD05G1248600 Malus domestica HOM05D004132 ORTHO05D006273 7.0e-98 360.9 191 86.4
MD10G1229100 Malus domestica HOM05D004132 ORTHO05D006273 7.0e-98 360.9 191 86.9
Rhsim04G0004400 Rhododendron simsii HOM05D004132 ORTHO05D006273 7.0e-98 360.9 197 86.8
Gohir.D10G139300 Gossypium hirsutum HOM05D004132 ORTHO05D006273 9.1e-98 360.5 191 86.9
Lsat_1_v5_gn_8_118000 Lactuca sativa HOM05D004132 ORTHO05D006273 9.1e-98 360.5 191 84.8
Zm00001eb153980 Zea mays HOM05D004132 ORTHO05D006273 9.1e-98 360.5 191 88.0
RcHm_v2.0_Chr3g0486261 Rosa chinensis HOM05D004132 ORTHO05D006273 4.5e-97 358.2 191 86.4
ECA232G2283 Erigeron canadensis HOM05D004132 ORTHO05D006273 5.9e-97 357.8 191 84.8
Thecc.04G197300 Theobroma cacao HOM05D004132 ORTHO05D006273 1.3e-96 356.7 191 84.8
CDE05G2803 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 1.7e-96 356.3 191 85.9
FAN16G0015 Fragaria x ananassa HOM05D004132 ORTHO05D006273 1.7e-96 356.3 191 86.4
FAN25G0118 Fragaria x ananassa HOM05D004132 ORTHO05D006273 1.7e-96 356.3 191 86.4
Sed0002662 Sechium edule HOM05D004132 ORTHO05D006273 1.7e-96 356.3 192 86.5
unitig_37.g12049 Utricularia gibba HOM05D004132 ORTHO05D006273 1.7e-96 356.3 191 86.9
CANSAT78G2113 Cannabis sativa HOM05D004132 ORTHO05D006273 2.9e-96 355.5 191 86.4
RcHm_v2.0_Chr5g0020641 Rosa chinensis HOM05D004132 ORTHO05D006273 2.9e-96 355.5 191 86.4
Nitab4.5_0000582g0060 Nicotiana tabacum HOM05D004132 ORTHO05D006273 5.0e-96 354.8 179 91.6
Ah.06g194990 Amaranthus hybridus HOM05D004132 ORTHO05D006273 6.5e-96 354.4 191 86.4
ATR0215G010 Amborella trichopoda HOM05D004132 ORTHO05D006273 6.5e-96 354.4 191 86.9
FvH4_3g12680 Fragaria vesca HOM05D004132 ORTHO05D006273 6.5e-96 354.4 191 85.9
Nitab4.5_0004719g0050 Nicotiana tabacum HOM05D004132 ORTHO05D006273 8.5e-96 354.0 173 93.6
Duzib151G0861 Durio zibethinus HOM05D004132 ORTHO05D006273 1.1e-95 353.6 191 84.8
Lj1g0015918 Lotus japonicus HOM05D004132 ORTHO05D006273 1.1e-95 353.6 191 84.8
Sp5g04580 Schrenkiella parvula HOM05D004132 ORTHO05D006273 2.5e-95 352.4 191 85.9
TWI59G0283 Tripterygium wilfordii HOM05D004132 ORTHO05D006273 2.5e-95 352.4 191 84.8
CDE05G2281 Ceratophyllum demersum HOM05D004132 ORTHO05D006273 4.2e-95 351.7 191 84.8
BcaC07g40275 Brassica carinata HOM05D004132 ORTHO05D006273 5.5e-95 351.3 191 84.3
A09p50920 Brassica napus HOM05D004132 ORTHO05D006273 5.5e-95 351.3 191 84.3
C08p33670 Brassica napus HOM05D004132 ORTHO05D006273 5.5e-95 351.3 191 84.3
BraA09t40538Z Brassica rapa HOM05D004132 ORTHO05D006273 5.5e-95 351.3 191 84.3
Carub.0005s2499 Capsella rubella HOM05D004132 ORTHO05D006273 9.4e-95 350.5 191 84.8
Thhalv10005992m.g Eutrema salsugineum HOM05D004132 ORTHO05D006273 9.4e-95 350.5 191 84.8
BcaC07g40186 Brassica carinata HOM05D004132 ORTHO05D006273 1.2e-94 350.1 191 83.8
Hund06337 Selenicereus undatus HOM05D004132 ORTHO05D006273 1.6e-94 349.7 174 92.5
Ah.04g159510 Amaranthus hybridus HOM05D004132 ORTHO05D006273 2.1e-94 349.4 191 83.8
BcaC08g44901 Brassica carinata HOM05D004132 ORTHO05D006273 2.1e-94 349.4 191 83.8
CARHR168500 Cardamine hirsuta HOM05D004132 ORTHO05D006273 2.1e-94 349.4 191 83.8
BcaB02g07547 Brassica carinata HOM05D004132 ORTHO05D006273 2.7e-94 349.0 191 83.8
A07p23930 Brassica napus HOM05D004132 ORTHO05D006273 2.7e-94 349.0 191 83.8
C06p25160 Brassica napus HOM05D004132 ORTHO05D006273 2.7e-94 349.0 191 83.8
BolC6t37674H Brassica oleracea HOM05D004132 ORTHO05D006273 2.7e-94 349.0 191 83.8
BraA07t30044Z Brassica rapa HOM05D004132 ORTHO05D006273 2.7e-94 349.0 191 83.8
Aqoxy2G02279 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 3.6e-94 348.6 191 83.8
BolC8t50964H Brassica oleracea HOM05D004132 ORTHO05D006273 4.7e-94 348.2 191 83.8
Sed0008608 Sechium edule HOM05D004132 ORTHO05D006273 4.7e-94 348.2 192 85.9
GSVIVG01020339001 Vitis vinifera HOM05D004132 ORTHO05D006273 4.7e-94 348.2 191 84.3
AL5G39830 Arabidopsis lyrata HOM05D004132 ORTHO05D006273 1.4e-93 346.7 191 82.7
ClCG01G025610 Citrullus lanatus HOM05D004132 ORTHO05D006273 3.0e-93 345.5 192 83.9
Aqoxy7G00307 Aquilegia oxysepala HOM05D004132 ORTHO05D006273 5.2e-93 344.7 191 82.2
AUR62010256 Chenopodium quinoa HOM05D004132 ORTHO05D006273 8.8e-93 344.0 174 89.7
AUR62013238 Chenopodium quinoa HOM05D004132 ORTHO05D006273 8.8e-93 344.0 174 89.7
HPP92_026254 Vanilla planifolia HOM05D004132 ORTHO05D006273 1.2e-92 343.6 191 85.3
MELO3C007024.2 Cucumis melo HOM05D004132 ORTHO05D006273 4.4e-92 341.7 192 82.8
Manes.12G056400 Manihot esculenta HOM05D004132 ORTHO05D006273 4.4e-92 341.7 174 88.5
AT3G58140 Arabidopsis thaliana HOM05D004132 ORTHO05D006273 7.5e-92 340.9 192 82.3
TPR.G28546 Trifolium pratense HOM05D004132 ORTHO05D006273 7.5e-92 340.9 174 87.9
CsaV3_6G052840 Cucumis sativus L. HOM05D004132 ORTHO05D006273 6.3e-91 337.8 192 81.8
AagrBONN_evm.TU.Sc2ySwM_344.2605 Anthoceros agrestis HOM05D004132 ORTHO05D006273 4.1e-90 335.1 191 82.2
EL10Ac9g22320 Beta vulgaris HOM05D004132 ORTHO05D006273 5.4e-90 334.7 180 84.4
Pp3c5_15740 Physcomitrium patens HOM05D004132 ORTHO05D006273 2.3e-88 329.3 192 81.2
SMO361G0681 Selaginella moellendorffii HOM05D004132 ORTHO05D006273 1.9e-87 326.2 191 77.5
Mapoly0072s0003 Marchantia polymorpha HOM05D004132 ORTHO05D006273 5.7e-84 314.7 192 78.6
Haze_06152 Corylus avellana HOM05D004132 ORTHO05D006273 7.8e-81 304.3 201 74.1
CBR_g19753 Chara braunii HOM05D004132 ORTHO05D006273 8.0e-78 294.3 191 74.3
Cre02.g079600 Chlamydomonas reinhardtii HOM05D004132 ORTHO05D006273 2.6e-76 289.3 192 71.9
MCO13G295 Micromonas commoda HOM05D004132 ORTHO05D006273 7.5e-76 287.7 201 70.6
Dinv25394 Davidia involucrata HOM05D004132 ORTHO05D006273 2.3e-72 276.2 137 89.8
PRCOL_00002437 Prasinoderma coloniale HOM05D004132 ORTHO05D006273 3.1e-69 265.8 194 64.9
GSVIVG01020308001 Vitis vinifera HOM05D004132 ORTHO05D018522 2.9e-59 232.6 127 85.8
Cfa022583 Carpinus fangiana HOM05D004132 ORTHO05D006273 1.4e-58 230.3 203 54.2
HanXRQChr09g0260401 Helianthus annuus HOM05D004132 ORTHO05D018522 1.9e-47 193.4 106 83.0
Haze_26151 Corylus avellana HOM05D004132 ORTHO05D006273 7.3e-47 191.4 195 48.7
SEGI_34381 Sequoiadendron giganteum HOM05D004132 ORTHO05D018522 2.6e-44 183.0 106 78.3
SEGI_05248 Sequoiadendron giganteum HOM05D004132 ORTHO05D006273 4.0e-37 159.1 86 82.6
Oeu056054.1 Olea europaea HOM05D004132 ORTHO05D006273 9.0e-37 157.9 74 98.6
ECA233G2583 Erigeron canadensis HOM05D004132 ORTHO05D006273 1.3e-35 154.1 81 82.7
GSVIVG01020347001 Vitis vinifera HOM05D004132 ORTHO05D006273 1.1e-34 151.0 78 85.9
QL04p095610 Quercus lobata HOM05D004132 ORTHO05D018522 5.1e-24 115.5 165 43.0
AL4G21280 Arabidopsis lyrata HOM05D004132 ORTHO05D000124 9.6e-23 111.3 107 53.3
arahy.Tifrunner.gnm1.ann1.0UIU5S Arachis hypogaea HOM05D004132 ORTHO05D018522 1.4e-21 107.5 54 87.0
BcaC09g51753 Brassica carinata HOM05D004132 ORTHO05D000912 1.0e-19 101.3 69 69.6
HanXRQChr16g0516741 Helianthus annuus HOM05D004132 ORTHO05D018522 5.0e-19 99.0 57 78.9
TPR.G19642 Trifolium pratense HOM05D004132 ORTHO05D018522 1.4e-18 97.4 56 85.7
RcHm_v2.0_Chr3g0486391 Rosa chinensis HOM05D004132 ORTHO05D006273 2.3e-16 90.1 52 78.8
arahy.Tifrunner.gnm1.ann1.DI7635 Arachis hypogaea HOM05D004132 ORTHO05D006273 6.5e-11 72.0 35 82.9
arahy.Tifrunner.gnm1.ann1.S74BYY Arachis hypogaea HOM05D004132 ORTHO05D006273 9.4e-10 68.2 35 82.9
GSVIVG01020335001 Vitis vinifera HOM05D004132 ORTHO05D006273 3.3e-07 59.7 26 96.2
Oeu056055.1 Olea europaea HOM05D004132 ORTHO05D006273 4.8e-06 55.8 26 92.3


User provided reference genes

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