Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017758.1 Olea europaea HOM05D002744 ORTHO05D006546 3.0e-70 268.5 142 100.0
SGA_v2.0_scaffold5G02937 Striga asiatica HOM05D000129 ORTHO05D000144 1.1e-45 186.8 121 78.5
MSTRG.5049 Avicennia marina HOM05D002744 ORTHO05D006546 2.6e-45 185.7 119 79.8
Dinv21810 Davidia involucrata HOM05D002744 ORTHO05D006546 1.7e-44 183.0 119 78.2
Nitab4.5_0000928g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 2.2e-44 182.6 121 77.7
TAR623G1472 Trochodendron aralioides HOM05D002744 ORTHO05D006546 4.8e-44 181.4 121 76.0
Cc02_g05710 Coffea canephora HOM05D002744 ORTHO05D006546 1.1e-43 180.3 119 78.2
Migut.N01809 Erythranthe guttata HOM05D002744 ORTHO05D006546 1.8e-43 179.5 124 76.6
CiPaw.02G197400 Carya illinoinensis HOM05D002744 ORTHO05D006546 5.3e-43 177.9 117 72.6
Haze_17322 Corylus avellana HOM05D002744 ORTHO05D006546 1.2e-42 176.8 117 74.4
Prupe.2G259600 Prunus persica HOM05D002744 ORTHO05D006546 1.5e-42 176.4 113 77.0
Ca_06017_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 3.4e-42 175.3 116 75.0
Ca_06977_v3 Cicer arietinum L. HOM05D002744 ORTHO05D006546 3.4e-42 175.3 116 75.0
Rhsim09G0183300 Rhododendron simsii HOM05D002744 ORTHO05D006546 3.4e-42 175.3 119 74.8
Sc10g0002810 Simmondsia chinensis HOM05D002744 ORTHO05D006546 3.4e-42 175.3 120 73.3
Actinidia00987 Actinidia chinensis HOM05D002744 ORTHO05D006546 4.5e-42 174.9 119 74.8
RcHm_v2.0_Chr1g0371491 Rosa chinensis HOM05D002744 ORTHO05D006546 4.5e-42 174.9 119 74.8
Actinidia07807 Actinidia chinensis HOM05D002744 ORTHO05D006546 7.7e-42 174.1 119 74.8
CSS0032617 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.0e-41 173.7 119 74.8
PGR044G1552 Punica granatum HOM05D002744 ORTHO05D006546 1.7e-41 172.9 120 72.5
QL08p064289 Quercus lobata HOM05D002744 ORTHO05D006546 6.5e-41 171.0 119 68.9
Solyc02g068420.4 Solanum lycopersicum HOM05D002744 ORTHO05D006546 6.5e-41 171.0 118 73.7
Sopen02g017560 Solanum pennellii HOM05D002744 ORTHO05D006546 6.5e-41 171.0 118 73.7
PGSC0003DMG400009431 Solanum tuberosum HOM05D002744 ORTHO05D006546 6.5e-41 171.0 118 73.7
vmacro09982 Vaccinium macrocarpon HOM05D002744 ORTHO05D006546 6.5e-41 171.0 118 72.9
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.1e-40 170.2 126 67.5
Hma1.2p1_1240F.1_g269620 Hydrangea macrophylla HOM05D002744 ORTHO05D006546 1.1e-40 170.2 118 75.4
PGSC0003DMG400024457 Solanum tuberosum HOM05D002744 ORTHO05D006546 1.1e-40 170.2 118 72.9
ECA238G3482 Erigeron canadensis HOM05D002744 ORTHO05D006546 1.4e-40 169.9 119 68.1
Gohir.A10G240800 Gossypium hirsutum HOM05D002744 ORTHO05D006546 1.4e-40 169.9 119 73.1
CDE04G1223 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 1.9e-40 169.5 119 70.6
MBI16_g02735_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D006546 2.5e-40 169.1 118 69.5
Peaxi162Scf00284g00133 Petunia axillaris HOM05D002744 ORTHO05D006546 2.5e-40 169.1 118 73.7
Duzib106G0255 Durio zibethinus HOM05D002744 ORTHO05D006546 3.2e-40 168.7 119 70.6
Eucgr.J00153 Eucalyptus grandis HOM05D002744 ORTHO05D006546 3.2e-40 168.7 121 71.9
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 3.2e-40 168.7 126 65.9
Lj1C963G12 Lonicera japonica HOM05D002744 ORTHO05D006546 3.2e-40 168.7 118 71.2
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 4.2e-40 168.3 111 73.0
Gorai.011G293300 Gossypium raimondii HOM05D002744 ORTHO05D006546 4.2e-40 168.3 121 71.9
GSVIVG01032722001 Vitis vinifera HOM05D002744 ORTHO05D006546 7.2e-40 167.5 119 71.4
Ah.05g176210 Amaranthus hybridus HOM05D002744 ORTHO05D006546 1.2e-39 166.8 118 69.5
MD01G1161500 Malus domestica HOM05D002744 ORTHO05D006546 1.2e-39 166.8 113 73.5
MELO3C020109.2 Cucumis melo HOM05D002744 ORTHO05D006546 1.6e-39 166.4 119 67.2
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.6e-39 166.4 126 65.9
Lsat_1_v5_gn_2_125961 Lactuca sativa HOM05D002744 ORTHO05D006546 1.6e-39 166.4 118 66.9
Aqoxy2G00754 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 2.1e-39 166.0 119 70.6
CAN.G39.16 Capsicum annuum HOM05D002744 ORTHO05D006546 2.1e-39 166.0 120 70.8
MD07G1229400 Malus domestica HOM05D002744 ORTHO05D006546 2.1e-39 166.0 113 70.8
Hund13511 Selenicereus undatus HOM05D002744 ORTHO05D006546 2.1e-39 166.0 118 70.3
Thecc.10G007000 Theobroma cacao HOM05D002744 ORTHO05D006546 2.1e-39 166.0 119 70.6
FvH4_7g25510 Fragaria vesca HOM05D002744 ORTHO05D006546 2.7e-39 165.6 119 68.9
Nitab4.5_0000263g0070 Nicotiana tabacum HOM05D002744 ORTHO05D006546 3.6e-39 165.2 163 59.5
Os05g0144200 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D006546 3.6e-39 165.2 116 69.0
ATR1127G109 Amborella trichopoda HOM05D002744 ORTHO05D006546 4.7e-39 164.9 121 69.4
CsaV3_5G010730 Cucumis sativus L. HOM05D002744 ORTHO05D006546 4.7e-39 164.9 119 67.2
Glyma.02G230100 Glycine max HOM05D002744 ORTHO05D006546 6.1e-39 164.5 116 69.8
HanXRQChr10g0309081 Helianthus annuus HOM05D002744 ORTHO05D006546 6.1e-39 164.5 119 64.7
ClCG07G004810 Citrullus lanatus HOM05D002744 ORTHO05D006546 7.9e-39 164.1 119 66.4
ClCG00G004700 Citrullus lanatus HOM05D002744 ORTHO05D006546 1.0e-38 163.7 119 66.4
ClCG06G010230 Citrullus lanatus HOM05D002744 ORTHO05D006546 1.0e-38 163.7 119 66.4
Nn2g11076 Nelumbo nucifera HOM05D002744 ORTHO05D006546 1.0e-38 163.7 119 68.1
Ciclev10031901m.g Citrus clementina HOM05D002744 ORTHO05D006546 1.4e-38 163.3 115 73.9
Potri.008G075700 Populus trichocarpa HOM05D002744 ORTHO05D006546 1.4e-38 163.3 117 70.9
Sabra08G0056300 Salix brachista HOM05D002744 ORTHO05D006546 1.4e-38 163.3 117 70.9
EL10Ac2g04290 Beta vulgaris HOM05D002744 ORTHO05D006546 1.8e-38 162.9 118 68.6
Gohir.D10G253000 Gossypium hirsutum HOM05D002744 ORTHO05D006546 1.8e-38 162.9 119 69.7
HanXRQChr07g0186551 Helianthus annuus HOM05D002744 ORTHO05D006546 1.8e-38 162.9 119 63.9
Lalb_Chr17g0336941 Lupinus albus HOM05D002744 ORTHO05D006546 1.8e-38 162.9 119 68.1
AUR62012335 Chenopodium quinoa HOM05D002744 ORTHO05D006546 3.9e-38 161.8 118 71.2
AUR62022979 Chenopodium quinoa HOM05D002744 ORTHO05D006546 3.9e-38 161.8 118 71.2
Sed0016960 Sechium edule HOM05D002744 ORTHO05D006546 5.2e-38 161.4 138 60.1
Lj1g0011333 Lotus japonicus HOM05D002744 ORTHO05D006546 1.5e-37 159.8 115 68.7
LjContig00357g0012394 Lotus japonicus HOM05D002744 ORTHO05D006546 1.5e-37 159.8 119 67.2
PSO210G7497 Papaver somniferum HOM05D002744 ORTHO05D006546 3.3e-37 158.7 118 69.5
PSO832G1082 Papaver somniferum HOM05D002744 ORTHO05D006546 3.3e-37 158.7 118 69.5
DCAR_011892 Daucus carota HOM05D002744 ORTHO05D006546 7.4e-37 157.5 136 60.3
CDE03G0451 Ceratophyllum demersum HOM05D002744 ORTHO05D006546 1.7e-36 156.4 119 68.9
CANSAT56G2377 Cannabis sativa HOM05D002744 ORTHO05D006546 4.8e-36 154.8 119 65.5
Psat0s1511g0040 Pisum sativum HOM05D002744 ORTHO05D006546 1.1e-35 153.7 116 65.5
VMungo0647G1938 Vigna mungo HOM05D002744 ORTHO05D006546 1.8e-35 152.9 116 65.5
Manes.07G139400 Manihot esculenta HOM05D002744 ORTHO05D006546 3.1e-35 152.1 116 69.0
Phvul.008G258300 Phaseolus vulgaris HOM05D002744 ORTHO05D006546 9.1e-35 150.6 116 63.8
Zm00001eb417890 Zea mays HOM05D002744 ORTHO05D006546 4.5e-34 148.3 125 61.6
TPR.G14721 Trifolium pratense HOM05D002744 ORTHO05D006546 5.9e-34 147.9 106 67.0
Glyma.14G196400 Glycine max HOM05D002744 ORTHO05D006546 1.3e-33 146.7 116 63.8
HPP92_001733 Vanilla planifolia HOM05D002744 ORTHO05D006546 2.2e-33 146.0 116 65.5
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 3.8e-33 145.2 120 61.7
SEGI_20256 Sequoiadendron giganteum HOM05D002744 ORTHO05D006546 8.5e-33 144.1 119 59.7
Sp4g22770 Schrenkiella parvula HOM05D002744 ORTHO05D006546 1.1e-32 143.7 120 61.7
THA.LOC104824347 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 2.5e-32 142.5 95 72.6
AT2G40430 Arabidopsis thaliana HOM05D002744 ORTHO05D006546 5.5e-32 141.4 119 60.5
AL4G38260 Arabidopsis lyrata HOM05D002744 ORTHO05D006546 1.2e-31 140.2 119 59.7
THA.LOC104814944 Tarenaya hassleriana HOM05D002744 ORTHO05D006546 6.1e-31 137.9 117 61.5
unitig_27.g25095 Utricularia gibba HOM05D002744 ORTHO05D006546 6.1e-31 137.9 108 65.7
arahy.Tifrunner.gnm1.ann1.G9S3DZ Arachis hypogaea HOM05D002744 ORTHO05D006546 8.0e-31 137.5 104 61.5
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 8.0e-31 137.5 89 74.2
Medtr5g083780 Medicago truncatula HOM05D002744 ORTHO05D006546 8.0e-31 137.5 99 68.7
Carub.0004s2268 Capsella rubella HOM05D002744 ORTHO05D006546 1.8e-30 136.3 119 58.8
SalBow1G3835 Salvia bowleyana HOM05D002744 ORTHO05D006546 1.5e-29 133.3 91 79.1
SalBow8G2269 Salvia bowleyana HOM05D002744 ORTHO05D006546 1.5e-29 133.3 91 79.1
SalBow8G4474 Salvia bowleyana HOM05D002744 ORTHO05D006546 1.5e-29 133.3 91 79.1
arahy.Tifrunner.gnm1.ann1.T368MT Arachis hypogaea HOM05D002744 ORTHO05D006546 2.0e-29 132.9 101 61.4
CARHR135540 Cardamine hirsuta HOM05D002744 ORTHO05D006546 4.4e-29 131.7 120 56.7
Thhalv10016839m.g Eutrema salsugineum HOM05D002744 ORTHO05D006546 4.8e-28 128.3 119 58.0
Aa31LG5G19130 Aethionema arabicum HOM05D002744 ORTHO05D006546 8.2e-28 127.5 125 55.2
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 1.1e-27 127.1 92 71.7
BcaB06g29140 Brassica carinata HOM05D002744 ORTHO05D006546 9.1e-27 124.0 120 54.2
BcaC02g12712 Brassica carinata HOM05D002744 ORTHO05D006546 1.6e-26 123.2 119 56.3
BolC4t21844H Brassica oleracea HOM05D002744 ORTHO05D006546 1.0e-25 120.6 93 64.5
BcaC02g07313 Brassica carinata HOM05D002744 ORTHO05D006546 1.3e-25 120.2 98 60.2
C04p01940 Brassica napus HOM05D002744 ORTHO05D006546 1.3e-25 120.2 89 66.3
CBR_g88544 Chara braunii HOM05D002744 ORTHO05D006546 1.3e-25 120.2 119 53.8
C04p68230 Brassica napus HOM05D002744 ORTHO05D006546 1.7e-25 119.8 93 62.4
BolC4t28327H Brassica oleracea HOM05D002744 ORTHO05D006546 1.7e-25 119.8 93 62.4
BraA05t19165Z Brassica rapa HOM05D002744 ORTHO05D006546 2.2e-25 119.4 119 52.9
Mapoly0001s0132 Marchantia polymorpha HOM05D002744 ORTHO05D006546 3.8e-25 118.6 122 50.8
A05p01680 Brassica napus HOM05D002744 ORTHO05D006546 1.5e-24 116.7 119 52.1
TWI56G0434 Tripterygium wilfordii HOM05D002744 ORTHO05D006546 4.2e-24 115.2 79 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2566 Anthoceros agrestis HOM05D002744 ORTHO05D006546 6.8e-22 107.8 122 45.9
A04p30810 Brassica napus HOM05D002744 ORTHO05D006546 1.5e-21 106.7 91 58.2
BraA04t18540Z Brassica rapa HOM05D002744 ORTHO05D006546 1.5e-21 106.7 91 58.2
Pp3c22_7700 Physcomitrium patens HOM05D002744 ORTHO05D006546 2.6e-21 105.9 113 47.8
Aqoxy466s002 Aquilegia oxysepala HOM05D002744 ORTHO05D006546 1.2e-13 80.5 108 46.3
MCO01G055 Micromonas commoda HOM05D002744 ORTHO05D006546 3.1e-11 72.4 115 38.3
Cre07.g348250 Chlamydomonas reinhardtii HOM05D002744 ORTHO05D006546 4.5e-10 68.6 114 37.7
MBI16_g06795_MAGBIO Magnolia biondii HOM05D002744 ORTHO05D018022 1.3e-09 67.0 65 50.8
Lsat_1_v5_gn_5_82241 Lactuca sativa HOM05D002744 ORTHO05D006546 2.9e-09 65.9 50 60.0
arahy.Tifrunner.gnm1.ann1.LJQ8FI Arachis hypogaea HOM05D002744 ORTHO05D006546 1.0e-06 57.4 48 56.2
SHI18675 Sapria himalayana HOM05D002744 ORTHO05D006546 2.3e-06 56.2 39 64.1
arahy.Tifrunner.gnm1.ann1.WF3XAB Arachis hypogaea HOM05D002744 ORTHO05D006546 3.0e-06 55.8 50 58.0
arahy.Tifrunner.gnm1.ann1.U77MTX Arachis hypogaea HOM05D002744 ORTHO05D006546 6.8e-06 54.7 50 56.0
arahy.Tifrunner.gnm1.ann1.XR4RRM Arachis hypogaea HOM05D002744 ORTHO05D006546 6.8e-06 54.7 50 56.0


User provided reference genes

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