Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017376.1 Olea europaea HOM05D002762 ORTHO05D004643 3.6e-78 295.0 170 100.0
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 1.5e-31 140.2 129 52.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.3e-31 139.0 129 54.3
HanXRQChr03g0079911 Helianthus annuus HOM05D002762 ORTHO05D004643 5.6e-31 138.3 129 51.9
Nn4g26135 Nelumbo nucifera HOM05D002762 ORTHO05D004643 7.3e-31 137.9 131 52.7
Lsat_1_v5_gn_5_47620 Lactuca sativa HOM05D002762 ORTHO05D004643 3.6e-30 135.6 129 51.9
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 6.2e-30 134.8 129 51.2
Hma1.2p1_2025F.1_g311500 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 6.2e-30 134.8 131 51.9
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 1.1e-29 134.0 129 51.9
Sed0001779 Sechium edule HOM05D002762 ORTHO05D004643 1.4e-29 133.7 129 49.6
TAR362G1268 Trochodendron aralioides HOM05D002762 ORTHO05D004643 1.8e-29 133.3 129 49.6
CSS0041788 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.1e-29 132.5 129 51.2
CSS0044156 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 3.1e-29 132.5 129 51.2
Oeu042638.1 Olea europaea HOM05D002762 ORTHO05D004643 3.1e-29 132.5 126 54.0
TPR.G18042 Trifolium pratense HOM05D002762 ORTHO05D004643 5.2e-29 131.7 131 49.6
vmacro08247 Vaccinium macrocarpon HOM05D002762 ORTHO05D004643 5.2e-29 131.7 129 52.7
CANSAT78G1359 Cannabis sativa HOM05D002762 ORTHO05D004643 1.5e-28 130.2 129 49.6
MD16G1180300 Malus domestica HOM05D002762 ORTHO05D004643 3.4e-28 129.0 131 48.1
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 5.8e-28 128.3 129 49.6
Phvul.003G097600 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 5.8e-28 128.3 129 50.4
Psat1g185320 Pisum sativum HOM05D002762 ORTHO05D004643 5.8e-28 128.3 131 48.1
Glyma.17G019800 Glycine max HOM05D002762 ORTHO05D004643 7.6e-28 127.9 129 50.4
Peaxi162Scf00769g00116 Petunia axillaris HOM05D002762 ORTHO05D004643 7.6e-28 127.9 129 48.8
VMungo1215G0792 Vigna mungo HOM05D002762 ORTHO05D004643 9.9e-28 127.5 129 49.6
Aa31LG9G1950 Aethionema arabicum HOM05D002762 ORTHO05D004643 1.3e-27 127.1 131 45.8
Manes.03G187500 Manihot esculenta HOM05D002762 ORTHO05D004643 1.3e-27 127.1 129 49.6
Phvul.006G157700 Phaseolus vulgaris HOM05D002762 ORTHO05D004643 1.3e-27 127.1 129 50.4
GSVIVG01017859001 Vitis vinifera HOM05D002762 ORTHO05D004643 1.3e-27 127.1 129 48.1
Dinv44461 Davidia involucrata HOM05D002762 ORTHO05D004643 1.7e-27 126.7 129 51.2
VMungo0540G1770 Vigna mungo HOM05D002762 ORTHO05D004643 1.7e-27 126.7 129 49.6
Lalb_Chr20g0118281 Lupinus albus HOM05D002762 ORTHO05D004643 2.2e-27 126.3 131 48.1
ClCG06G005660 Citrullus lanatus HOM05D002762 ORTHO05D004643 2.9e-27 125.9 120 50.8
Nitab4.5_0002295g0030 Nicotiana tabacum HOM05D002762 ORTHO05D004643 2.9e-27 125.9 129 47.3
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 3.8e-27 125.6 129 46.5
Prupe.1G147900 Prunus persica HOM05D002762 ORTHO05D004643 4.9e-27 125.2 129 46.5
CAN.G1247.4 Capsicum annuum HOM05D002762 ORTHO05D004643 6.4e-27 124.8 129 48.1
Ca_00594_v3 Cicer arietinum L. HOM05D002762 ORTHO05D004643 6.4e-27 124.8 131 48.1
FAN22G0648 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.1e-26 124.0 131 47.3
PGSC0003DMG400030790 Solanum tuberosum HOM05D002762 ORTHO05D004643 1.4e-26 123.6 129 48.1
Solyc06g054440.2 Solanum lycopersicum HOM05D002762 ORTHO05D004643 4.1e-26 122.1 129 47.3
Sopen06g019510 Solanum pennellii HOM05D002762 ORTHO05D004643 4.1e-26 122.1 129 47.3
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 5.4e-26 121.7 129 49.6
MSTRG.3976 Avicennia marina HOM05D002762 ORTHO05D004643 5.4e-26 121.7 125 48.0
BcaC06g32936 Brassica carinata HOM05D002762 ORTHO05D004643 9.2e-26 120.9 131 42.7
FAN17G2967 Fragaria x ananassa HOM05D002762 ORTHO05D004643 9.2e-26 120.9 129 47.3
HanXRQChr11g0325871 Helianthus annuus HOM05D002762 ORTHO05D004643 9.2e-26 120.9 115 52.2
FvH4_4g14060 Fragaria vesca HOM05D002762 ORTHO05D004643 1.6e-25 120.2 129 47.3
CDE05G1517 Ceratophyllum demersum HOM05D002762 ORTHO05D004643 2.1e-25 119.8 129 46.5
MELO3C021388.2 Cucumis melo HOM05D002762 ORTHO05D004643 2.1e-25 119.8 120 48.3
Medtr2g021030 Medicago truncatula HOM05D002762 ORTHO05D004643 2.1e-25 119.8 131 45.8
arahy.Tifrunner.gnm1.ann1.L75CTN Arachis hypogaea HOM05D002762 ORTHO05D004643 3.5e-25 119.0 129 45.7
MBI19_g20289_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D004643 4.6e-25 118.6 104 52.9
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 6.0e-25 118.2 131 42.7
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 6.0e-25 118.2 131 42.7
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 6.0e-25 118.2 131 42.7
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 6.0e-25 118.2 131 42.7
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 6.0e-25 118.2 131 42.7
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 6.0e-25 118.2 102 55.9
Thecc.04G271300 Theobroma cacao HOM05D002762 ORTHO05D004643 7.8e-25 117.9 129 45.7
FAN12G3553 Fragaria x ananassa HOM05D002762 ORTHO05D004643 1.0e-24 117.5 129 45.7
Cc03_g02820 Coffea canephora HOM05D002762 ORTHO05D004643 2.3e-24 116.3 129 49.6
DCAR_030582 Daucus carota HOM05D002762 ORTHO05D004643 3.0e-24 115.9 129 44.2
Duzib151G0782 Durio zibethinus HOM05D002762 ORTHO05D004643 3.0e-24 115.9 129 45.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.0e-24 115.9 121 48.8
Lj3C805G9 Lonicera japonica HOM05D002762 ORTHO05D004643 3.9e-24 115.5 129 48.1
arahy.Tifrunner.gnm1.ann1.EJ0XN1 Arachis hypogaea HOM05D002762 ORTHO05D004643 5.1e-24 115.2 129 45.0
Duzib052G0700 Durio zibethinus HOM05D002762 ORTHO05D004643 5.1e-24 115.2 129 44.2
RcHm_v2.0_Chr4g0419291 Rosa chinensis HOM05D002762 ORTHO05D004643 5.1e-24 115.2 129 44.2
SalBow2G0360 Salvia bowleyana HOM05D002762 ORTHO05D004643 6.6e-24 114.8 115 50.4
SalBow2G3267 Salvia bowleyana HOM05D002762 ORTHO05D004643 6.6e-24 114.8 115 50.4
Glyma.15G101100 Glycine max HOM05D002762 ORTHO05D004643 8.6e-24 114.4 106 52.8
Actinidia23462 Actinidia chinensis HOM05D002762 ORTHO05D004643 1.5e-23 113.6 117 48.7
CSS0016618 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D004643 4.3e-23 112.1 94 56.4
Eucgr.B01185 Eucalyptus grandis HOM05D002762 ORTHO05D004643 4.3e-23 112.1 115 47.8
Haze_01003 Corylus avellana HOM05D002762 ORTHO05D004643 7.3e-23 111.3 129 45.0
CsaV3_6G005490 Cucumis sativus L. HOM05D002762 ORTHO05D004643 7.3e-23 111.3 111 48.6
MD13G1179300 Malus domestica HOM05D002762 ORTHO05D004643 9.6e-23 110.9 129 43.4
COL.COLO4_13978 Corchorus olitorius HOM05D002762 ORTHO05D004643 1.6e-22 110.2 129 43.4
THA.LOC104802549 Tarenaya hassleriana HOM05D002762 ORTHO05D004643 1.6e-22 110.2 113 46.0
Thhalv10024700m.g Eutrema salsugineum HOM05D002762 ORTHO05D004643 4.7e-22 108.6 112 44.6
Cfa015545 Carpinus fangiana HOM05D002762 ORTHO05D004643 8.1e-22 107.8 129 43.4
Rhsim04G0212100 Rhododendron simsii HOM05D002762 ORTHO05D004643 8.1e-22 107.8 129 44.2
PGR031G1661 Punica granatum HOM05D002762 ORTHO05D004643 1.4e-21 107.1 129 42.6
AT4G15475 Arabidopsis thaliana HOM05D002762 ORTHO05D004643 2.4e-21 106.3 111 44.1
Glyma.13G211600 Glycine max HOM05D002762 ORTHO05D004643 3.1e-21 105.9 131 44.3
AL7G40070 Arabidopsis lyrata HOM05D002762 ORTHO05D004643 8.9e-21 104.4 109 45.0
Carub.0007s2643 Capsella rubella HOM05D002762 ORTHO05D004643 1.5e-20 103.6 109 45.0
Lj6g0020038 Lotus japonicus HOM05D002762 ORTHO05D004643 1.5e-20 103.6 114 43.9
QL06p006068 Quercus lobata HOM05D002762 ORTHO05D004643 5.8e-20 101.7 129 39.5
Sc19g0004700 Simmondsia chinensis HOM05D002762 ORTHO05D004643 9.9e-20 100.9 129 44.2
TWI73G1094 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 1.7e-19 100.1 129 41.9
ATR0626G340 Amborella trichopoda HOM05D002762 ORTHO05D004643 3.8e-19 99.0 122 44.3
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 6.4e-19 98.2 129 41.1
arahy.Tifrunner.gnm1.ann1.6S26PP Arachis hypogaea HOM05D002762 ORTHO05D004643 8.4e-19 97.8 129 41.1
CARHR222240 Cardamine hirsuta HOM05D002762 ORTHO05D004643 8.4e-19 97.8 108 41.7
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 1.1e-18 97.4 109 41.3
Lalb_Chr18g0055921 Lupinus albus HOM05D002762 ORTHO05D004643 2.4e-18 96.3 131 39.7
SGA_v2.0_scaffold237G43847 Striga asiatica HOM05D002762 ORTHO05D004643 2.4e-18 96.3 129 43.4
Gohir.A09G231600 Gossypium hirsutum HOM05D002762 ORTHO05D004643 1.6e-17 93.6 129 38.0
Gohir.D09G232700 Gossypium hirsutum HOM05D002762 ORTHO05D004643 1.6e-17 93.6 129 38.0
Gorai.006G255600 Gossypium raimondii HOM05D002762 ORTHO05D004643 1.6e-17 93.6 129 38.0
SEGI_13295 Sequoiadendron giganteum HOM05D002762 ORTHO05D004643 4.6e-17 92.0 129 37.2
CiPaw.01G157300 Carya illinoinensis HOM05D002762 ORTHO05D004643 1.7e-16 90.1 115 40.9
Migut.G00244 Erythranthe guttata HOM05D002762 ORTHO05D004643 6.6e-16 88.2 104 45.2
SMO228G0132 Selaginella moellendorffii HOM05D002762 ORTHO05D004643 6.6e-16 88.2 120 40.0
PSO302G0133 Papaver somniferum HOM05D002762 ORTHO05D004643 8.7e-16 87.8 78 51.3
Migut.G00246 Erythranthe guttata HOM05D002762 ORTHO05D004643 7.3e-15 84.7 116 41.4
PSO170G0016 Papaver somniferum HOM05D002762 ORTHO05D004643 9.6e-15 84.3 77 50.6
Os11g0641200 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D004643 3.1e-13 79.3 106 40.6
AagrBONN_evm.TU.Sc2ySwM_117.2600 Anthoceros agrestis HOM05D002762 ORTHO05D004643 3.4e-12 75.9 127 32.3
Hma1.2p1_0511F.1_g169210 Hydrangea macrophylla HOM05D002762 ORTHO05D004643 4.5e-12 75.5 113 39.8
Aqoxy2G03201 Aquilegia oxysepala HOM05D002762 ORTHO05D004643 5.8e-12 75.1 76 50.0
HPP92_016898 Vanilla planifolia HOM05D000144 ORTHO05D004643 7.6e-12 74.7 108 38.9
Zm00001eb115300 Zea mays HOM05D002762 ORTHO05D004643 1.3e-11 73.9 106 38.7
Sc03g0001840 Simmondsia chinensis HOM05D001905 ORTHO05D001820 3.9e-08 62.4 130 30.0
CsaV3_3G033360 Cucumis sativus L. HOM05D002125 ORTHO05D002105 5.1e-08 62.0 122 28.7
BcaB04g19793 Brassica carinata HOM05D001818 ORTHO05D001780 6.7e-08 61.6 118 34.7
ECA248G1832 Erigeron canadensis HOM05D001818 ORTHO05D001780 1.5e-07 60.5 95 35.8
SGA_v2.0_scaffold20G09131 Striga asiatica HOM05D001818 ORTHO05D001780 2.5e-07 59.7 106 36.8
A05p21540 Brassica napus HOM05D001905 ORTHO05D001820 7.4e-07 58.2 129 29.5
BraA05t21074Z Brassica rapa HOM05D001905 ORTHO05D001820 7.4e-07 58.2 129 29.5
Eucgr.C01744 Eucalyptus grandis HOM05D001818 ORTHO05D001780 9.6e-07 57.8 123 33.3
Pp3c20_15890 Physcomitrium patens HOM05D011912 ORTHO05D014147 9.6e-07 57.8 84 33.3
SalBow4G2763 Salvia bowleyana HOM05D002125 ORTHO05D002105 9.6e-07 57.8 122 28.7
C09p06860 Brassica napus HOM05D001818 ORTHO05D001780 1.3e-06 57.4 118 33.9
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.3e-06 57.4 105 35.2
BolC5t32351H Brassica oleracea HOM05D001905 ORTHO05D001820 2.1e-06 56.6 129 28.7
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 2.1e-06 56.6 106 33.0
Lsat_1_v5_gn_1_43380 Lactuca sativa HOM05D001818 ORTHO05D001780 3.7e-06 55.8 103 32.0
Lsat_1_v5_gn_6_21521 Lactuca sativa HOM05D001818 ORTHO05D001780 3.7e-06 55.8 95 35.8
Pp3c6_5960 Physcomitrium patens HOM05D002762 ORTHO05D004643 6.2e-06 55.1 115 26.1


User provided reference genes

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