Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017165.1 Olea europaea HOM05D001625 ORTHO05D008114 6.0e-88 327.4 157 100.0
Oeu043552.1 Olea europaea HOM05D001625 ORTHO05D008114 9.6e-70 266.9 141 91.5
CSS0045021 Camellia sinensis var. sinensis HOM05D001625 ORTHO05D008114 1.1e-57 226.9 141 68.8
HanXRQChr02g0037721 Helianthus annuus HOM05D001625 ORTHO05D008114 1.1e-57 226.9 152 67.8
ECA247G1238 Erigeron canadensis HOM05D001625 ORTHO05D008114 1.4e-57 226.5 141 71.6
Sopen12g030770 Solanum pennellii HOM05D001625 ORTHO05D008114 1.2e-56 223.4 151 66.2
Dinv35971 Davidia involucrata HOM05D001625 ORTHO05D008114 2.7e-56 222.2 141 69.5
Nitab4.5_0001845g0020 Nicotiana tabacum HOM05D001625 ORTHO05D008114 3.6e-56 221.9 141 68.8
Hma1.2p1_0718F.1_g208400 Hydrangea macrophylla HOM05D001625 ORTHO05D008114 4.6e-56 221.5 141 68.8
vmacro21534 Vaccinium macrocarpon HOM05D001625 ORTHO05D008114 4.6e-56 221.5 141 67.4
Cfa018529 Carpinus fangiana HOM05D001625 ORTHO05D008114 6.1e-56 221.1 141 70.9
Solyc12g088880.2 Solanum lycopersicum HOM05D001625 ORTHO05D008114 7.9e-56 220.7 151 65.6
Gohir.D05G204700 Gossypium hirsutum HOM05D001625 ORTHO05D008114 1.3e-55 219.9 140 70.7
Gorai.009G211000 Gossypium raimondii HOM05D001625 ORTHO05D008114 1.3e-55 219.9 140 70.7
Actinidia23267 Actinidia chinensis HOM05D001625 ORTHO05D008114 2.3e-55 219.2 152 65.8
Rhsim06G0048400 Rhododendron simsii HOM05D001625 ORTHO05D008114 3.0e-55 218.8 141 68.8
SGA_v2.0_scaffold208G41993 Striga asiatica HOM05D001625 ORTHO05D008114 3.9e-55 218.4 141 72.3
COL.COLO4_26480 Corchorus olitorius HOM05D001625 ORTHO05D008114 5.1e-55 218.0 140 68.6
Duzib116G0543 Durio zibethinus HOM05D001625 ORTHO05D008114 5.1e-55 218.0 140 68.6
Nitab4.5_0000453g0190 Nicotiana tabacum HOM05D001625 ORTHO05D008114 5.1e-55 218.0 141 68.1
Lj1g0008117 Lotus japonicus HOM05D001625 ORTHO05D008114 8.7e-55 217.2 140 71.4
Peaxi162Scf00064g00122 Petunia axillaris HOM05D001625 ORTHO05D008114 8.7e-55 217.2 141 68.8
Migut.C00593 Erythranthe guttata HOM05D001625 ORTHO05D008114 1.1e-54 216.9 141 73.8
Lsat_1_v5_gn_1_20920 Lactuca sativa HOM05D001625 ORTHO05D008114 1.1e-54 216.9 141 68.1
PGSC0003DMG400015444 Solanum tuberosum HOM05D001625 ORTHO05D008114 1.1e-54 216.9 152 63.8
Thecc.08G010700 Theobroma cacao HOM05D001625 ORTHO05D008114 1.5e-54 216.5 140 67.9
GSVIVG01009520001 Vitis vinifera HOM05D001625 ORTHO05D008114 1.5e-54 216.5 141 71.6
Medtr3g101500 Medicago truncatula HOM05D001625 ORTHO05D008114 1.9e-54 216.1 139 71.9
QL02p005347 Quercus lobata HOM05D001625 ORTHO05D008114 1.9e-54 216.1 140 70.0
VMungo1309G1770 Vigna mungo HOM05D001625 ORTHO05D008114 2.5e-54 215.7 140 72.1
Ah.05g168810 Amaranthus hybridus HOM05D001625 ORTHO05D008114 3.3e-54 215.3 151 63.6
DCAR_019460 Daucus carota HOM05D001625 ORTHO05D008114 3.3e-54 215.3 141 67.4
QL02p005341 Quercus lobata HOM05D001625 ORTHO05D008114 3.3e-54 215.3 141 69.5
TPR.G35860 Trifolium pratense HOM05D001625 ORTHO05D008114 3.3e-54 215.3 139 70.5
Aqoxy5G01262 Aquilegia oxysepala HOM05D001625 ORTHO05D008114 5.7e-54 214.5 141 68.8
Gohir.A05G201600 Gossypium hirsutum HOM05D001625 ORTHO05D008114 7.4e-54 214.2 140 67.9
Aqoxy5G01260 Aquilegia oxysepala HOM05D001625 ORTHO05D008114 9.7e-54 213.8 141 68.8
arahy.Tifrunner.gnm1.ann1.SS1ETW Arachis hypogaea HOM05D001625 ORTHO05D008114 9.7e-54 213.8 140 70.0
TWI56G0317 Tripterygium wilfordii HOM05D001625 ORTHO05D008114 9.7e-54 213.8 140 68.6
CiPaw.15G061300 Carya illinoinensis HOM05D001625 ORTHO05D008114 1.3e-53 213.4 141 70.2
PSO170G1058 Papaver somniferum HOM05D001625 ORTHO05D008114 1.3e-53 213.4 147 67.3
Phvul.009G064000 Phaseolus vulgaris HOM05D001625 ORTHO05D008114 1.3e-53 213.4 140 70.0
PSO210G4359 Papaver somniferum HOM05D001625 ORTHO05D008114 1.6e-53 213.0 147 67.3
BolC7t46405H Brassica oleracea HOM05D001625 ORTHO05D008114 2.2e-53 212.6 140 70.0
Nn1g00509 Nelumbo nucifera HOM05D001625 ORTHO05D008114 2.2e-53 212.6 141 65.2
Psat5g077160 Pisum sativum HOM05D001625 ORTHO05D008114 2.2e-53 212.6 150 66.7
TAR381G0900 Trochodendron aralioides HOM05D001625 ORTHO05D008114 2.2e-53 212.6 141 68.8
Aa31LG8G12870 Aethionema arabicum HOM05D001625 ORTHO05D008114 2.8e-53 212.2 140 66.4
BcaNung02168 Brassica carinata HOM05D001625 ORTHO05D008114 3.7e-53 211.8 140 69.3
A03p61940 Brassica napus HOM05D001625 ORTHO05D008114 3.7e-53 211.8 140 69.3
Nitab4.5_0004184g0040 Nicotiana tabacum HOM05D001625 ORTHO05D008114 3.7e-53 211.8 142 64.1
AL7G18200 Arabidopsis lyrata HOM05D001625 ORTHO05D008114 4.8e-53 211.5 140 67.9
C07p59600 Brassica napus HOM05D001625 ORTHO05D008114 4.8e-53 211.5 140 69.3
Hund17582 Selenicereus undatus HOM05D001625 ORTHO05D008114 4.8e-53 211.5 140 66.4
arahy.Tifrunner.gnm1.ann1.GU4KEX Arachis hypogaea HOM05D001625 ORTHO05D008114 6.3e-53 211.1 140 69.3
Eucgr.F02362 Eucalyptus grandis HOM05D001625 ORTHO05D008114 8.2e-53 210.7 140 70.0
Cpa.g.sc49.3 Carica papaya HOM05D001625 ORTHO05D008114 1.1e-52 210.3 140 65.7
BraA03t15233Z Brassica rapa HOM05D001625 ORTHO05D008114 1.4e-52 209.9 140 68.6
Glyma.06G038700 Glycine max HOM05D001625 ORTHO05D008114 1.4e-52 209.9 140 68.6
Manes.18G032300 Manihot esculenta HOM05D001625 ORTHO05D008114 1.4e-52 209.9 141 66.0
CsaV3_4G034210 Cucumis sativus L. HOM05D001625 ORTHO05D008114 1.8e-52 209.5 140 70.0
Sabra02G0099900 Salix brachista HOM05D001625 ORTHO05D008114 1.8e-52 209.5 141 68.1
Cc10_g04290 Coffea canephora HOM05D001625 ORTHO05D008114 2.4e-52 209.1 142 68.3
Thhalv10025657m.g Eutrema salsugineum HOM05D001625 ORTHO05D008114 2.4e-52 209.1 140 67.1
MELO3C016742.2 Cucumis melo HOM05D001625 ORTHO05D008114 3.1e-52 208.8 140 69.3
Lalb_Chr23g0267001 Lupinus albus HOM05D001625 ORTHO05D008114 4.1e-52 208.4 140 68.6
SalBow7G2586 Salvia bowleyana HOM05D001625 ORTHO05D008114 4.1e-52 208.4 141 68.8
Prupe.1G438100 Prunus persica HOM05D001625 ORTHO05D008114 5.3e-52 208.0 141 68.1
EL10Ac1g01745 Beta vulgaris HOM05D001625 ORTHO05D008114 6.9e-52 207.6 140 66.4
Carub.0007s0712 Capsella rubella HOM05D001625 ORTHO05D008114 6.9e-52 207.6 140 66.4
Ca_15956_v3 Cicer arietinum L. HOM05D001625 ORTHO05D008114 6.9e-52 207.6 139 69.1
Sp7g31070 Schrenkiella parvula HOM05D001625 ORTHO05D008114 6.9e-52 207.6 140 67.1
AT4G33360 Arabidopsis thaliana HOM05D001625 ORTHO05D008114 9.1e-52 207.2 141 65.2
Atru.chr13.653 Acer truncatum HOM05D001625 ORTHO05D008114 1.5e-51 206.5 140 67.9
CARHR241410 Cardamine hirsuta HOM05D001625 ORTHO05D008114 1.5e-51 206.5 140 66.4
DCAR_019459 Daucus carota HOM05D000838 ORTHO05D008114 1.5e-51 206.5 141 64.5
RcHm_v2.0_Chr6g0307561 Rosa chinensis HOM05D001625 ORTHO05D008114 2.0e-51 206.1 141 65.2
RcHm_v2.0_Chr6g0307711 Rosa chinensis HOM05D001625 ORTHO05D008114 2.0e-51 206.1 141 65.2
CANSAT11G0880 Cannabis sativa HOM05D001625 ORTHO05D008114 4.5e-51 204.9 140 64.3
Sed0008971 Sechium edule HOM05D001625 ORTHO05D008114 4.5e-51 204.9 141 67.4
Sc26g0003990 Simmondsia chinensis HOM05D001625 ORTHO05D008114 5.9e-51 204.5 141 65.2
MSTRG.1337 Avicennia marina HOM05D001625 ORTHO05D008114 7.7e-51 204.1 141 68.8
CAN.G1422.8 Capsicum annuum HOM05D001625 ORTHO05D008114 7.7e-51 204.1 142 64.1
FvH4_2g34590 Fragaria vesca HOM05D001625 ORTHO05D008114 7.7e-51 204.1 141 65.2
Potri.002G127400 Populus trichocarpa HOM05D001625 ORTHO05D008114 7.7e-51 204.1 140 65.0
PGR031G0488 Punica granatum HOM05D001625 ORTHO05D008114 7.7e-51 204.1 140 66.4
FAN15G0193 Fragaria x ananassa HOM05D001625 ORTHO05D008114 1.0e-50 203.8 141 65.2
FAN20G1997 Fragaria x ananassa HOM05D001625 ORTHO05D008114 1.0e-50 203.8 141 65.2
MD08G1103100 Malus domestica HOM05D001625 ORTHO05D008114 1.0e-50 203.8 141 66.7
HPP92_005781 Vanilla planifolia HOM05D001625 ORTHO05D008114 1.3e-50 203.4 141 63.8
HPP92_005809 Vanilla planifolia HOM05D001625 ORTHO05D008114 1.3e-50 203.4 141 63.8
MBI02_g17332_MAGBIO Magnolia biondii HOM05D001625 ORTHO05D008114 2.9e-50 202.2 141 64.5
SEGI_26518 Sequoiadendron giganteum HOM05D001625 ORTHO05D008114 3.8e-50 201.8 141 65.2
Os03g0184550 Oryza sativa ssp. japonica HOM05D001625 ORTHO05D008114 3.2e-49 198.7 141 61.7
ATR0100G004 Amborella trichopoda HOM05D001625 ORTHO05D008114 7.2e-49 197.6 141 63.1
AUR62022425 Chenopodium quinoa HOM05D001625 ORTHO05D008114 7.2e-49 197.6 140 62.9
Sabra02G0099800 Salix brachista HOM05D001625 ORTHO05D008114 7.2e-49 197.6 140 64.3
Zm00001eb006380 Zea mays HOM05D001625 ORTHO05D008114 9.4e-49 197.2 141 61.0
Lsat_1_v5_gn_1_20400 Lactuca sativa HOM05D001625 ORTHO05D008114 4.6e-48 194.9 152 57.9
Lj1g0004345 Lotus japonicus HOM05D001625 ORTHO05D008114 4.6e-48 194.9 139 63.3
SMO201G0007 Selaginella moellendorffii HOM05D001625 ORTHO05D008114 1.2e-43 180.3 144 55.6
Mapoly0011s0141 Marchantia polymorpha HOM05D001625 ORTHO05D008114 7.7e-43 177.6 140 56.4
Pp3c17_9770 Physcomitrium patens HOM05D001625 ORTHO05D008114 5.2e-39 164.9 129 58.1
Haze_17539 Corylus avellana HOM05D001625 ORTHO05D008114 8.8e-39 164.1 102 71.6
Haze_17548 Corylus avellana HOM05D001625 ORTHO05D008114 8.8e-39 164.1 102 71.6
Nn1g05825 Nelumbo nucifera HOM05D001625 ORTHO05D008114 4.4e-38 161.8 105 66.7
Lj4C775G11 Lonicera japonica HOM05D001625 ORTHO05D008114 7.7e-35 151.0 143 55.9
FAN27G2722 Fragaria x ananassa HOM05D000838 ORTHO05D000656 7.2e-33 144.4 94 70.2
unitig_90.g27525 Utricularia gibba HOM05D001625 ORTHO05D008114 6.8e-23 111.3 77 66.2
MSTRG.23410 Avicennia marina HOM05D001625 ORTHO05D008114 7.0e-20 101.3 70 67.1
Haze_17540 Corylus avellana HOM05D001625 ORTHO05D008114 7.3e-09 64.7 40 72.5
Haze_17549 Corylus avellana HOM05D001625 ORTHO05D008114 9.5e-09 64.3 40 70.0
ClCG05G019760 Citrullus lanatus HOM05D001625 ORTHO05D008114 3.6e-08 62.4 44 59.1
Psat0s3123g0160 Pisum sativum HOM05D001625 ORTHO05D008114 4.7e-08 62.0 42 59.5
AUR62022424 Chenopodium quinoa HOM05D001625 ORTHO05D008114 1.0e-07 60.8 41 61.0
AUR62042179 Chenopodium quinoa HOM05D001625 ORTHO05D008114 1.0e-07 60.8 47 57.4
Potri.002G127500 Populus trichocarpa HOM05D001625 ORTHO05D008114 1.0e-07 60.8 40 62.5
AT1G09480 Arabidopsis thaliana HOM05D000089 ORTHO05D000104 7.5e-06 54.7 92 32.6


User provided reference genes

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