Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.3e-276 955.7 454 100.0
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 2.8e-178 629.0 465 64.5
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 9.6e-171 604.0 465 63.4
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 6.4e-167 591.3 468 62.4
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 5.5e-166 588.2 465 63.7
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 7.1e-166 587.8 468 62.2
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.4e-161 573.5 459 61.2
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.4e-160 568.9 459 60.6
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 1.4e-158 563.5 470 60.4
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 5.1e-156 555.1 380 68.7
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 3.1e-153 545.8 460 58.7
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 3.4e-152 542.3 475 57.7
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 5.9e-152 541.6 463 58.7
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 7.6e-152 541.2 458 57.6
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 1.9e-150 536.6 459 59.9
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 2.5e-150 536.2 465 57.2
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 3.2e-150 535.8 466 57.5
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 7.2e-150 534.6 463 56.4
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 1.6e-149 533.5 458 58.3
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 1.8e-148 530.0 465 56.8
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 1.9e-147 526.6 465 55.7
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 4.8e-146 521.9 465 56.8
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 4.8e-146 521.9 463 58.5
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 2.6e-144 516.2 547 51.2
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 4.5e-144 515.4 460 55.2
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 1.7e-143 513.5 521 52.4
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 5.5e-142 508.4 463 53.3
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 4.7e-141 505.4 463 53.3
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 4.7e-141 505.4 471 56.1
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 6.1e-141 505.0 463 53.8
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 3.9e-140 502.3 459 55.3
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 8.8e-140 501.1 463 53.8
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 1.7e-138 496.9 467 54.4
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 6.3e-138 495.0 464 53.2
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 6.9e-137 491.5 464 53.9
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 1.5e-136 490.3 466 53.4
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 4.5e-136 488.8 467 54.0
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 7.7e-136 488.0 472 54.4
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 1.9e-134 483.4 465 54.0
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.2e-134 482.6 471 53.5
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.2e-133 480.7 459 56.0
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 1.8e-132 476.9 463 51.2
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 8.8e-132 474.6 470 53.2
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 8.8e-132 474.6 474 53.2
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 1.1e-131 474.2 470 52.8
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 4.1e-129 465.7 481 50.1
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 1.3e-127 460.7 467 52.2
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 1.9e-126 456.8 474 50.2
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 1.2e-125 454.1 463 51.2
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.0e-124 451.1 429 53.8
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 9.1e-121 438.0 463 48.6
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 2.2e-119 433.3 490 46.9
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 8.5e-119 431.4 437 51.9
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 3.2e-118 429.5 482 48.3
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 7.2e-118 428.3 458 49.3
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 6.3e-114 415.2 469 48.8
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 8.3e-114 414.8 384 53.4
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 7.0e-113 411.8 464 48.7
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 2.3e-108 396.7 458 46.3
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 4.0e-108 396.0 343 57.1
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 5.2e-108 395.6 415 49.9
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 1.1e-105 387.9 452 47.6
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 1.2e-104 384.4 312 58.0
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 2.9e-103 379.8 349 55.6
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 3.8e-103 379.4 470 46.4
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 2.5e-102 376.7 527 45.4
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 3.0e-100 369.8 318 56.9
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 5.2e-100 369.0 492 42.3
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 1.2e-99 367.9 434 44.2
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 2.2e-98 363.6 462 44.2
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 6.6e-95 352.1 422 45.0
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 5.8e-91 339.0 483 43.1
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 1.3e-87 327.8 497 38.2
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 1.5e-83 314.3 351 47.6
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 1.9e-73 280.8 336 46.4
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 1.3e-71 274.6 360 45.6
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 9.6e-70 268.5 341 37.0
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 4.0e-68 263.1 473 36.6
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.8e-66 256.5 338 44.4
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 3.9e-63 246.5 309 45.6
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 3.0e-55 220.3 207 51.7
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 6.7e-55 219.2 344 42.7
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 2.1e-40 171.0 256 44.1
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 1.8e-39 167.9 95 77.9
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.7e-29 133.7 107 65.4
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 3.6e-16 90.5 115 47.0
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 1.8e-12 78.2 90 41.1
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 1.8e-12 78.2 88 43.2
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.8e-12 78.2 88 43.2
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.8e-12 78.2 88 43.2
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.4e-12 77.8 90 42.2
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.4e-12 77.8 88 43.2
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 4.1e-12 77.0 54 70.4
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 4.1e-12 77.0 99 42.4
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 4.1e-12 77.0 80 47.5
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 5.3e-12 76.6 60 51.7
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 7.0e-12 76.3 105 41.0
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 1.6e-11 75.1 88 40.9
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 3.5e-11 73.9 88 42.0
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 3.5e-11 73.9 72 47.2
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 7.7e-11 72.8 54 53.7
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 7.7e-11 72.8 54 53.7
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 1.3e-10 72.0 37 81.1
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 1.7e-10 71.6 67 53.7
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.7e-10 71.6 57 57.9
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 1.7e-10 71.6 77 42.9
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 1.7e-10 71.6 52 57.7
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 2.2e-10 71.2 51 54.9
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 2.2e-10 71.2 77 44.2
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 3.8e-10 70.5 43 65.1
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 3.8e-10 70.5 60 51.7
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 3.8e-10 70.5 73 43.8
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 5.0e-10 70.1 55 52.7
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 5.0e-10 70.1 73 43.8
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 5.0e-10 70.1 51 54.9
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 5.0e-10 70.1 54 57.4
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 5.0e-10 70.1 92 35.9
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 6.5e-10 69.7 87 46.0
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 6.5e-10 69.7 64 51.6
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 6.5e-10 69.7 91 41.8
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 6.5e-10 69.7 91 41.8
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 6.5e-10 69.7 73 42.5
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 6.5e-10 69.7 53 54.7
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 8.5e-10 69.3 51 54.9
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 8.5e-10 69.3 68 51.5
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 8.5e-10 69.3 74 44.6
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 1.1e-09 68.9 65 55.4
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 1.1e-09 68.9 59 52.5
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 1.1e-09 68.9 43 58.1
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 1.5e-09 68.6 40 65.0
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 1.5e-09 68.6 89 38.2
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 1.5e-09 68.6 43 62.8
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.5e-09 68.6 58 48.3
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 1.5e-09 68.6 58 48.3
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 1.5e-09 68.6 55 54.5
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 1.9e-09 68.2 47 61.7
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 1.9e-09 68.2 43 62.8
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 1.9e-09 68.2 47 59.6
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 2.5e-09 67.8 69 47.8
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 3.2e-09 67.4 52 61.5
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 3.2e-09 67.4 51 54.9
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 3.2e-09 67.4 43 65.1
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 3.2e-09 67.4 64 48.4
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 3.2e-09 67.4 48 56.2
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 3.2e-09 67.4 53 56.6
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 4.2e-09 67.0 78 39.7
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 4.2e-09 67.0 60 46.7
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 4.2e-09 67.0 43 62.8
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 4.2e-09 67.0 73 43.8
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 4.2e-09 67.0 64 46.9
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 4.2e-09 67.0 48 60.4
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 5.5e-09 66.6 80 43.8
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 5.5e-09 66.6 66 48.5
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 5.5e-09 66.6 40 65.0
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 5.5e-09 66.6 51 54.9
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 5.5e-09 66.6 47 57.4
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 5.5e-09 66.6 82 37.8
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 5.5e-09 66.6 64 45.3
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 7.2e-09 66.2 51 52.9
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 7.2e-09 66.2 71 43.7
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 9.4e-09 65.9 90 35.6
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 9.4e-09 65.9 94 34.0
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 9.4e-09 65.9 55 49.1
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 1.2e-08 65.5 54 51.9
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 1.2e-08 65.5 51 52.9
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 1.2e-08 65.5 54 53.7
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 1.6e-08 65.1 43 60.5
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 1.6e-08 65.1 47 57.4
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 2.1e-08 64.7 41 65.9
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 2.1e-08 64.7 74 41.9
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 2.7e-08 64.3 49 53.1
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 2.7e-08 64.3 75 44.0
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 3.6e-08 63.9 90 35.6
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 3.6e-08 63.9 76 39.5
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 3.6e-08 63.9 55 52.7
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 4.7e-08 63.5 57 49.1
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 6.1e-08 63.2 51 51.0
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 4.0e-07 60.5 52 50.0
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 4.0e-07 60.5 81 35.8
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 6.8e-07 59.7 52 48.1
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 6.8e-07 59.7 52 50.0
CSS0012229 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 4.4e-06 57.0 62 53.2


User provided reference genes

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