Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 2.9e-54 214.9 104 100.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.9e-34 149.1 103 63.1
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.9e-34 149.1 103 63.1
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.1e-32 143.3 104 66.3
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.8e-32 142.5 103 66.0
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 9.0e-32 140.2 104 64.4
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 9.0e-32 140.2 104 65.4
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 2.0e-31 139.0 103 65.0
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 2.6e-31 138.7 103 65.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.0e-30 136.7 104 63.5
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.7e-30 136.0 104 62.5
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 4.9e-30 134.4 107 60.7
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 4.9e-30 134.4 104 62.5
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.9e-30 134.4 103 61.2
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 9.3e-29 130.2 100 63.0
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 7.9e-28 127.1 104 58.7
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.3e-27 126.3 103 58.3
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.0e-27 125.2 123 53.7
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 8.7e-27 123.6 105 55.2
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 1.1e-26 123.2 103 56.3
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.5e-26 122.9 102 59.8
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 4.3e-26 121.3 96 62.5
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 9.6e-26 120.2 103 58.3
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.3e-25 119.8 103 52.4
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 2.8e-25 118.6 103 51.5
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 4.8e-25 117.9 103 57.3
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 6.2e-25 117.5 104 51.9
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 6.2e-25 117.5 103 51.5
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 8.2e-25 117.1 103 56.3
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 8.2e-25 117.1 102 52.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 8.2e-25 117.1 102 56.9
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 8.2e-25 117.1 104 53.8
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 8.2e-25 117.1 104 53.8
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 1.1e-24 116.7 104 51.9
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.4e-24 115.5 103 55.3
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.4e-24 115.5 102 52.9
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 2.4e-24 115.5 104 58.7
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 3.1e-24 115.2 102 52.9
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 3.1e-24 115.2 103 51.5
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 3.1e-24 115.2 104 54.8
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 4.1e-24 114.8 104 53.8
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 4.1e-24 114.8 103 51.5
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 5.3e-24 114.4 102 55.9
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 9.0e-24 113.6 103 50.5
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 9.0e-24 113.6 102 52.0
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.5e-23 112.8 102 54.9
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.5e-23 112.8 102 53.9
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 2.0e-23 112.5 104 54.8
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.6e-23 112.1 107 52.3
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 2.6e-23 112.1 91 57.1
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 2.6e-23 112.1 108 51.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 3.4e-23 111.7 104 52.9
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 3.4e-23 111.7 93 54.8
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 7.6e-23 110.5 104 49.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-22 110.2 108 50.9
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 1.3e-22 109.8 104 52.9
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.0e-22 107.8 106 50.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 5.0e-22 107.8 102 51.0
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 6.5e-22 107.5 107 51.4
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 8.4e-22 107.1 108 50.0
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.1e-21 106.7 102 49.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 2.5e-21 105.5 97 54.6
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 4.2e-21 104.8 103 53.4
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.2e-20 103.2 108 52.8
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 1.6e-20 102.8 107 51.4
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 3.5e-20 101.7 111 47.7
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.5e-20 101.7 106 44.3
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 4.6e-20 101.3 106 43.4
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 6.1e-20 100.9 103 47.6
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.0e-19 100.1 99 48.5
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.8e-19 99.4 104 51.9
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.3e-19 99.0 104 47.1
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 3.9e-19 98.2 106 42.5
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 8.7e-19 97.1 104 51.9
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.1e-18 96.7 106 42.5
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.5e-18 96.3 114 43.9
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.9e-18 95.9 106 42.5
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.9e-18 95.9 106 42.5
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.9e-18 95.9 105 44.8
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.5e-18 95.5 107 42.1
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 3.3e-18 95.1 101 46.5
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 4.3e-18 94.7 103 45.6
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 4.3e-18 94.7 103 45.6
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 9.7e-18 93.6 103 43.7
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 9.7e-18 93.6 108 48.1
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.3e-17 93.2 99 53.5
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 2.2e-17 92.4 69 68.1
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.2e-17 92.4 109 45.9
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-17 92.4 109 45.9
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 2.2e-17 92.4 107 47.7
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 2.8e-17 92.0 103 42.7
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 4.8e-17 91.3 100 45.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 6.3e-17 90.9 94 50.0
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 6.3e-17 90.9 105 45.7
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 8.2e-17 90.5 103 42.7
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 5.3e-16 87.8 87 49.4
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 9.0e-16 87.0 102 43.1
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.0e-16 87.0 109 44.0
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-15 86.7 109 43.1
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 1.2e-12 76.6 95 43.2
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-12 76.6 95 43.2
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.6e-12 76.3 107 41.1
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 3.6e-12 75.1 87 41.4
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.9e-12 73.9 88 46.6
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 6.3e-09 64.3 87 41.4


User provided reference genes

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