Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016390.1 Olea europaea HOM05D000110 ORTHO05D000024 3.5e-82 308.1 145 100.0
Oeu007713.1 Olea europaea HOM05D000110 ORTHO05D000024 1.7e-68 262.7 147 85.0
Manes.14G065600 Manihot esculenta HOM05D000110 ORTHO05D000024 5.1e-33 144.8 160 52.5
CiPaw.11G026000 Carya illinoinensis HOM05D000110 ORTHO05D000024 7.4e-32 141.0 165 50.3
Potri.015G077100 Populus trichocarpa HOM05D000110 ORTHO05D000024 1.1e-30 137.1 172 48.8
Sabra15G0101800 Salix brachista HOM05D000110 ORTHO05D000024 1.4e-30 136.7 174 49.4
QL10p011551 Quercus lobata HOM05D000110 ORTHO05D000024 6.9e-30 134.4 179 48.6
Sabra12G0058100 Salix brachista HOM05D000110 ORTHO05D000024 7.6e-29 131.0 171 46.8
Atru.chr9.2481 Acer truncatum HOM05D000110 ORTHO05D000024 3.8e-28 128.6 172 48.3
Phvul.009G178300 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 3.8e-28 128.6 191 47.1
Cfa019135 Carpinus fangiana HOM05D000110 ORTHO05D000024 4.9e-28 128.3 176 47.2
Potri.012G081300 Populus trichocarpa HOM05D000110 ORTHO05D000024 4.9e-28 128.3 171 46.2
Prupe.5G173100 Prunus persica HOM05D000110 ORTHO05D000024 4.9e-28 128.3 183 48.1
VMungo1309G0670 Vigna mungo HOM05D000110 ORTHO05D000024 1.4e-27 126.7 191 46.6
Hma1.2p1_0176F.1_g077380 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 4.2e-27 125.2 171 48.0
Haze_07502 Corylus avellana HOM05D000110 ORTHO05D000024 7.1e-27 124.4 190 44.2
Cpa.g.c34071 Carica papaya HOM05D000110 ORTHO05D000024 9.3e-27 124.0 138 50.7
MD14G1180100 Malus domestica HOM05D000110 ORTHO05D000024 1.2e-26 123.6 177 45.8
MD06G1173600 Malus domestica HOM05D000110 ORTHO05D000024 2.7e-26 122.5 180 47.2
CSS0038562 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 1.0e-25 120.6 149 46.3
Manes.06G105100 Manihot esculenta HOM05D000110 ORTHO05D000024 1.0e-25 120.6 178 45.5
TAR622G0496 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.0e-25 120.6 167 47.9
Peaxi162Scf00009g00023 Petunia axillaris HOM05D000110 ORTHO05D000024 1.3e-25 120.2 177 50.8
Thecc.03G013000 Theobroma cacao HOM05D000110 ORTHO05D000024 8.7e-25 117.5 160 45.6
Nitab4.5_0000514g0200 Nicotiana tabacum HOM05D000110 ORTHO05D000024 1.9e-24 116.3 184 47.3
RcHm_v2.0_Chr7g0193511 Rosa chinensis HOM05D000110 ORTHO05D000024 1.9e-24 116.3 187 47.6
Peaxi162Scf00689g10026 Petunia axillaris HOM05D000110 ORTHO05D000024 5.6e-24 114.8 165 52.1
MSTRG.11458 Avicennia marina HOM05D000110 ORTHO05D000024 9.6e-24 114.0 175 47.4
MSTRG.23133 Avicennia marina HOM05D000110 ORTHO05D000024 9.6e-24 114.0 174 49.4
Dinv20651 Davidia involucrata HOM05D000110 ORTHO05D000024 9.6e-24 114.0 152 52.0
Nn3g16849 Nelumbo nucifera HOM05D000110 ORTHO05D000024 9.6e-24 114.0 181 42.5
Cc04_g14150 Coffea canephora HOM05D000110 ORTHO05D000024 1.3e-23 113.6 174 44.8
Nn4g22756 Nelumbo nucifera HOM05D000110 ORTHO05D000024 1.3e-23 113.6 178 44.4
Lj5P124T48 Lonicera japonica HOM05D000110 ORTHO05D000024 1.6e-23 113.2 152 51.3
TAR629G3295 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.6e-23 113.2 113 55.8
CSS0004951 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 2.8e-23 112.5 160 42.5
Lj1g0010952 Lotus japonicus HOM05D000110 ORTHO05D000024 3.7e-23 112.1 196 43.4
Nitab4.5_0000984g0110 Nicotiana tabacum HOM05D000110 ORTHO05D000024 3.7e-23 112.1 187 48.7
FAN13G0392 Fragaria x ananassa HOM05D000110 ORTHO05D000024 8.2e-23 110.9 190 45.3
FAN04G1487 Fragaria x ananassa HOM05D000110 ORTHO05D000024 1.4e-22 110.2 190 44.7
FvH4_5g05330 Fragaria vesca HOM05D000110 ORTHO05D000024 3.1e-22 109.0 190 44.7
FAN18G3510 Fragaria x ananassa HOM05D000110 ORTHO05D000024 3.1e-22 109.0 190 44.7
GSVIVG01007758001 Vitis vinifera HOM05D000110 ORTHO05D000024 3.1e-22 109.0 175 44.0
Glyma.04G183700 Glycine max HOM05D000110 ORTHO05D000024 9.0e-22 107.5 198 42.4
Nitab4.5_0000003g0600 Nicotiana tabacum HOM05D000110 ORTHO05D000024 1.5e-21 106.7 169 46.7
FAN08G1884 Fragaria x ananassa HOM05D000110 ORTHO05D000024 2.0e-21 106.3 190 43.7
FAN18G3941 Fragaria x ananassa HOM05D000110 ORTHO05D000024 2.0e-21 106.3 190 44.2
Nitab4.5_0001017g0070 Nicotiana tabacum HOM05D000110 ORTHO05D000024 2.0e-21 106.3 166 46.4
TPR.G25321 Trifolium pratense HOM05D000110 ORTHO05D000024 2.6e-21 105.9 180 42.8
Medtr3g077750 Medicago truncatula HOM05D000110 ORTHO05D000024 3.4e-21 105.5 186 43.0
Dinv02540 Davidia involucrata HOM05D000110 ORTHO05D000024 5.8e-21 104.8 178 44.9
Lalb_Chr11g0071341 Lupinus albus HOM05D000110 ORTHO05D000024 1.0e-20 104.0 200 43.5
TAR374G0463 Trochodendron aralioides HOM05D000110 ORTHO05D000024 2.2e-20 102.8 156 46.2
Glyma.06G182200 Glycine max HOM05D000110 ORTHO05D000024 4.9e-20 101.7 202 41.1
Eucgr.K02841 Eucalyptus grandis HOM05D000110 ORTHO05D000024 8.4e-20 100.9 155 45.2
Ca_16173_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 1.1e-19 100.5 204 40.7
Duzib084G0601 Durio zibethinus HOM05D000110 ORTHO05D000024 1.4e-19 100.1 156 41.0
Actinidia19323 Actinidia chinensis HOM05D001156 ORTHO05D000024 1.9e-19 99.8 141 48.9
COL.COLO4_30041 Corchorus olitorius HOM05D000110 ORTHO05D000024 1.9e-19 99.8 180 42.8
VMungo1215G0646 Vigna mungo HOM05D000110 ORTHO05D000024 1.9e-19 99.8 189 43.4
Ciclev10021278m.g Citrus clementina HOM05D000110 ORTHO05D000024 2.5e-19 99.4 180 40.6
Glyma.17G089300 Glycine max HOM05D000110 ORTHO05D000024 4.2e-19 98.6 184 44.6
Psat5g114920 Pisum sativum HOM05D000110 ORTHO05D000024 5.5e-19 98.2 182 42.9
TWI39G0123 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 9.3e-19 97.4 176 43.8
CANSAT80G1476 Cannabis sativa HOM05D000110 ORTHO05D000024 2.1e-18 96.3 157 41.4
Duzib068G0524 Durio zibethinus HOM05D000110 ORTHO05D000024 2.1e-18 96.3 162 40.1
Lalb_Chr07g0182751 Lupinus albus HOM05D000110 ORTHO05D000024 6.0e-18 94.7 168 42.9
MBI10_g28019_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 7.9e-18 94.4 119 42.0
Gohir.D12G275100 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.3e-17 93.6 146 40.4
vmacro19390 Vaccinium macrocarpon HOM05D000110 ORTHO05D000024 1.3e-17 93.6 159 44.0
Aqoxy3G02938 Aquilegia oxysepala HOM05D000110 ORTHO05D000024 1.8e-17 93.2 87 55.2
Gohir.A12G274400 Gossypium hirsutum HOM05D000110 ORTHO05D000024 2.3e-17 92.8 146 39.7
Rhsim08G0172700 Rhododendron simsii HOM05D001156 ORTHO05D000024 3.0e-17 92.4 158 41.8
MELO3C002264.2 Cucumis melo HOM05D000110 ORTHO05D000024 3.9e-17 92.0 100 50.0
CsaV3_1G008490 Cucumis sativus L. HOM05D000110 ORTHO05D000024 3.9e-17 92.0 100 50.0
Glyma.05G037800 Glycine max HOM05D000110 ORTHO05D000024 6.7e-17 91.3 188 41.0
CSS0014762 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 8.7e-17 90.9 179 42.5
Gorai.008G295600 Gossypium raimondii HOM05D000110 ORTHO05D000024 1.1e-16 90.5 146 39.7
Gohir.D09G167100 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.5e-16 90.1 137 42.3
Gorai.006G188900 Gossypium raimondii HOM05D000110 ORTHO05D000024 1.5e-16 90.1 137 42.3
ClCG01G013150 Citrullus lanatus HOM05D000110 ORTHO05D000024 1.9e-16 89.7 175 38.3
Sed0023707 Sechium edule HOM05D000110 ORTHO05D000024 1.9e-16 89.7 170 38.8
Phvul.003G200600 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 2.5e-16 89.4 189 43.4
DCAR_026137 Daucus carota HOM05D000110 ORTHO05D000024 3.3e-16 89.0 171 41.5
CAN.G628.81 Capsicum annuum HOM05D000110 ORTHO05D000024 5.7e-16 88.2 140 50.0
arahy.Tifrunner.gnm1.ann1.9D5CB6 Arachis hypogaea HOM05D000110 ORTHO05D000024 9.7e-16 87.4 214 37.9
MBI16_g27094_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 1.3e-15 87.0 111 45.9
Sed0006918 Sechium edule HOM05D000110 ORTHO05D000024 1.3e-15 87.0 174 37.9
TWI14G0885 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 1.3e-15 87.0 156 44.2
CAN.G1305.21 Capsicum annuum HOM05D000110 ORTHO05D000024 4.8e-15 85.1 173 41.0
Gohir.A09G171600 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.1e-14 84.0 137 40.9
PGSC0003DMG400018090 Solanum tuberosum HOM05D000110 ORTHO05D000024 1.4e-14 83.6 178 40.4
Migut.I00005 Erythranthe guttata HOM05D000110 ORTHO05D000024 2.4e-14 82.8 158 39.9
arahy.Tifrunner.gnm1.ann1.E40HQK Arachis hypogaea HOM05D000110 ORTHO05D000024 4.1e-14 82.0 116 47.4
Lalb_Chr12g0201601 Lupinus albus HOM05D000110 ORTHO05D000024 6.9e-14 81.3 169 41.4
SGA_v2.0_scaffold25G10840 Striga asiatica HOM05D000110 ORTHO05D000024 2.6e-13 79.3 124 41.9
PGR044G1768 Punica granatum HOM05D000110 ORTHO05D000024 3.4e-13 79.0 139 41.0
PGSC0003DMG400027089 Solanum tuberosum HOM05D000110 ORTHO05D000024 4.5e-13 78.6 171 40.4
Sopen03g032010 Solanum pennellii HOM05D000110 ORTHO05D000024 5.9e-13 78.2 186 37.6
Hund09440 Selenicereus undatus HOM05D000110 ORTHO05D000024 2.2e-12 76.3 135 39.3
Sc10g0010050 Simmondsia chinensis HOM05D000110 ORTHO05D000024 3.8e-12 75.5 160 37.5
Solyc03g112930.3 Solanum lycopersicum HOM05D000110 ORTHO05D000024 3.8e-12 75.5 183 36.6
Lsat_1_v5_gn_5_14640 Lactuca sativa HOM05D000110 ORTHO05D000024 1.2e-10 70.5 180 37.2
SGA_v2.0_scaffold90G27908 Striga asiatica HOM05D000110 ORTHO05D000024 2.7e-10 69.3 131 40.5
Ah.11g051580 Amaranthus hybridus HOM05D000110 ORTHO05D000024 6.1e-10 68.2 158 36.7
Solyc06g071480.3 Solanum lycopersicum HOM05D000110 ORTHO05D000024 1.0e-09 67.4 170 37.6
Aqoxy3G01048 Aquilegia oxysepala HOM05D000110 ORTHO05D000024 1.4e-09 67.0 118 38.1
THA.LOC104821574 Tarenaya hassleriana HOM05D000110 ORTHO05D000024 3.9e-09 65.5 137 35.8
HanXRQChr16g0517371 Helianthus annuus HOM05D000110 ORTHO05D000024 6.7e-09 64.7 119 41.2
Sopen06g027770 Solanum pennellii HOM05D000110 ORTHO05D000024 8.8e-09 64.3 175 38.3
HanXRQChr05g0156241 Helianthus annuus HOM05D000110 ORTHO05D000024 1.7e-07 60.1 172 36.0
A06p29720 Brassica napus HOM05D000110 ORTHO05D000024 2.8e-07 59.3 201 33.3
ECA246G2437 Erigeron canadensis HOM05D000110 ORTHO05D000024 3.7e-07 58.9 178 31.5
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 4.8e-07 58.5 135 30.4
BraA06t25919Z Brassica rapa HOM05D000110 ORTHO05D000024 8.2e-07 57.8 114 40.4
EL10Ac5g10742 Beta vulgaris HOM05D000110 ORTHO05D000024 1.4e-06 57.0 158 36.1
CDE04G1677 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 1.4e-06 57.0 133 30.1
HPP92_003794 Vanilla planifolia HOM05D000110 ORTHO05D000024 2.4e-06 56.2 139 30.9
CARHR276750 Cardamine hirsuta HOM05D000110 ORTHO05D000024 5.3e-06 55.1 168 29.8


User provided reference genes

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