Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 1.2e-285 985.7 482 100.0
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 4.0e-215 751.5 477 75.5
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 4.5e-211 738.0 483 74.3
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 8.5e-210 733.8 473 74.6
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.1e-209 733.4 475 74.7
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.5e-209 733.0 479 73.7
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 1.9e-209 732.6 486 72.6
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 2.5e-209 732.3 475 74.5
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 2.7e-208 728.8 461 75.3
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 4.7e-208 728.0 458 74.7
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 5.2e-207 724.5 468 73.5
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 5.2e-207 724.5 476 73.3
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 6.8e-207 724.2 485 72.4
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 1.1e-204 716.8 462 73.6
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 1.8e-204 716.1 460 73.9
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 1.8e-204 716.1 474 73.0
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 1.8e-204 716.1 474 74.1
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 1.8e-204 716.1 398 82.9
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 2.4e-204 715.7 485 72.4
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 3.1e-204 715.3 471 72.8
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 3.1e-204 715.3 476 72.5
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 4.1e-204 714.9 486 71.8
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 9.1e-204 713.8 485 71.3
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 1.2e-203 713.4 485 70.9
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 2.7e-203 712.2 453 75.9
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 5.9e-203 711.1 474 72.4
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.6e-200 703.0 482 70.5
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 1.0e-199 700.3 396 80.1
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 2.3e-199 699.1 463 72.1
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 5.2e-199 698.0 478 70.5
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 5.2e-199 698.0 461 71.8
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 8.9e-199 697.2 463 72.1
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 1.5e-198 696.4 474 70.5
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 7.5e-198 694.1 449 74.8
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.2e-197 692.6 499 68.7
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 6.3e-197 691.0 483 70.6
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 8.3e-197 690.6 459 71.9
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 2.4e-196 689.1 480 70.0
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 9.2e-196 687.2 463 70.4
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 9.2e-196 687.2 458 71.2
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 5.9e-195 684.5 432 73.4
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.0e-194 683.7 443 73.1
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.7e-194 682.9 426 74.9
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 2.3e-194 682.6 470 69.1
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 3.8e-194 681.8 440 73.6
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 5.0e-194 681.4 479 67.4
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 9.5e-193 677.2 475 68.4
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 9.5e-193 677.2 396 78.5
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 9.5e-193 677.2 467 69.6
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 9.5e-193 677.2 473 70.0
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 3.6e-192 675.2 473 68.5
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 2.3e-191 672.5 428 72.9
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 1.2e-190 670.2 480 68.8
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 9.8e-190 667.2 478 67.2
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 2.9e-189 665.6 468 67.7
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 1.1e-188 663.7 477 68.6
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 1.4e-188 663.3 470 68.7
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 1.4e-188 663.3 489 67.3
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 1.9e-188 662.9 465 69.5
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 4.1e-188 661.8 467 69.8
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 4.1e-188 661.8 456 68.2
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 7.0e-188 661.0 464 69.2
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 9.2e-188 660.6 476 67.4
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 2.0e-187 659.4 466 69.1
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 2.0e-187 659.4 466 69.1
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 4.6e-187 658.3 466 69.3
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.0e-186 657.1 459 69.9
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 8.6e-186 654.1 462 68.8
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 8.6e-186 654.1 424 72.4
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.9e-185 652.9 477 67.7
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 7.3e-185 651.0 428 70.1
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.2e-184 650.2 466 68.2
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 2.1e-184 649.4 466 68.5
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 2.1e-184 649.4 422 70.6
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 6.8e-183 644.4 452 68.1
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 8.9e-183 644.0 481 64.2
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 2.6e-182 642.5 426 70.2
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 1.4e-180 636.7 476 65.1
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 1.9e-180 636.3 465 66.5
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 5.4e-180 634.8 484 64.5
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.1e-179 632.9 463 65.4
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 3.0e-178 629.0 408 71.3
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 3.9e-178 628.6 456 65.1
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.9e-178 628.6 464 64.9
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 6.6e-178 627.9 394 74.9
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.6e-176 623.2 400 70.2
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 8.1e-176 620.9 358 80.2
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 4.0e-175 618.6 465 64.7
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.7e-171 605.9 427 70.0
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 8.6e-170 600.9 409 67.5
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 7.3e-169 597.8 468 60.0
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 1.1e-167 594.0 478 62.1
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 1.1e-167 594.0 405 71.4
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.2e-167 591.7 386 68.9
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 2.0e-166 589.7 423 66.4
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 2.0e-166 589.7 481 62.2
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 5.8e-166 588.2 355 76.6
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 4.9e-165 585.1 357 75.4
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 1.1e-164 583.9 414 65.2
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 3.2e-164 582.4 401 67.1
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 4.4e-158 562.0 353 70.0
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 3.2e-156 555.8 334 79.6
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.9e-153 546.6 393 66.9
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 8.4e-149 531.2 371 68.7
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 1.6e-144 516.9 399 65.4
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 3.7e-128 462.6 446 54.9
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 6.3e-128 461.8 432 51.2
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 8.2e-128 461.5 402 53.7
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 8.5e-125 451.4 323 70.9
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.0e-122 444.5 408 53.2
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.4e-119 433.3 405 51.4
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 6.9e-119 431.8 260 79.2
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.5e-113 414.1 435 47.1
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 4.4e-105 386.0 287 67.9
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 2.6e-89 333.6 243 61.7
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 3.5e-78 296.6 185 67.6
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 2.0e-73 280.8 161 78.3
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 8.3e-72 275.4 185 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 7.3e-68 262.3 205 58.5
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 9.5e-68 261.9 222 63.5
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 4.3e-60 236.5 157 67.5
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 6.2e-59 232.6 130 76.9
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 5.8e-49 199.5 130 67.7
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.6e-30 138.3 374 29.7
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 2.3e-29 134.4 383 27.9
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 1.5e-28 131.7 86 73.3
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 3.8e-24 117.1 347 28.0
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 2.3e-21 107.8 368 28.8
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 2.7e-14 84.3 79 60.8
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 1.8e-13 81.6 80 60.0
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 2.2e-11 74.7 91 41.8
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.8e-10 71.6 166 33.7
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.2e-09 68.9 61 54.1
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.2e-09 68.9 61 54.1
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 4.5e-09 67.0 55 54.5
Os07g0660400 Oryza sativa ssp. japonica HOM05D005787 ORTHO05D007011 5.5e-07 60.1 62 43.5


User provided reference genes

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