Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 8.7e-125 450.3 223 100.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 7.4e-100 367.5 211 86.7
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.0e-96 357.1 211 84.4
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 5.0e-96 354.8 211 84.4
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.5e-95 353.2 209 82.3
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 5.5e-95 351.3 210 82.9
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 9.4e-95 350.5 224 78.6
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 9.4e-95 350.5 208 83.2
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 9.4e-95 350.5 207 83.6
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.2e-94 350.1 208 83.2
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.6e-94 349.7 217 80.2
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.1e-94 349.4 208 82.7
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.1e-94 349.4 208 81.7
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 6.1e-94 347.8 208 80.8
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 8.0e-94 347.4 226 74.3
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.3e-93 345.9 208 81.7
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 5.2e-93 344.7 208 80.8
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 5.2e-93 344.7 209 80.4
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 6.7e-93 344.4 211 80.1
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.1e-92 343.6 212 79.2
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 1.5e-92 343.2 215 77.7
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.5e-92 343.2 211 81.5
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 5.7e-92 341.3 211 80.1
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.3e-91 340.1 210 80.0
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.7e-91 338.6 209 79.9
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 6.3e-91 337.8 211 78.7
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.1e-90 337.0 208 80.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 2.4e-90 335.9 208 79.3
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 4.1e-90 335.1 210 80.5
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 4.1e-90 335.1 221 75.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 7.0e-90 334.3 212 79.2
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 7.0e-90 334.3 210 80.0
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 9.1e-90 334.0 208 79.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.2e-89 333.6 208 79.8
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 2.7e-89 332.4 209 78.5
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 3.5e-89 332.0 211 78.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 5.9e-89 331.3 211 79.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.9e-89 331.3 211 79.1
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 7.7e-89 330.9 213 78.4
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 7.7e-89 330.9 208 77.9
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.3e-88 330.1 211 78.7
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.2e-88 329.3 210 76.2
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.2e-88 329.3 211 78.2
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 2.9e-88 328.9 207 78.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.9e-88 328.9 208 78.8
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 5.0e-88 328.2 211 79.1
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.1e-87 327.0 211 77.3
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.1e-87 327.0 210 77.6
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.5e-87 326.6 207 77.8
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.5e-87 325.9 207 76.8
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 2.5e-87 325.9 223 74.0
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.2e-87 325.5 219 74.9
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 3.2e-87 325.5 209 76.6
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 4.2e-87 325.1 209 77.0
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 9.4e-87 323.9 211 75.8
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.1e-86 322.8 198 80.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 2.1e-86 322.8 208 76.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 3.6e-86 322.0 207 77.8
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.7e-86 321.6 212 76.9
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.4e-85 320.1 211 75.4
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.8e-85 319.7 216 73.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.3e-85 319.3 211 77.3
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.3e-85 319.3 211 74.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 5.2e-85 318.2 220 72.7
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 6.8e-85 317.8 225 72.4
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 6.8e-85 317.8 211 73.9
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 8.8e-85 317.4 219 72.6
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.2e-84 317.0 219 72.6
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 1.5e-84 316.6 221 70.1
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.5e-84 316.6 211 74.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 2.0e-84 316.2 216 74.1
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 2.6e-84 315.8 211 74.9
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 4.4e-84 315.1 221 71.9
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 7.5e-84 314.3 237 69.2
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 9.8e-84 313.9 212 74.5
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 9.8e-84 313.9 222 71.6
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.3e-83 313.5 221 71.0
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.3e-83 313.5 203 77.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.7e-83 313.2 218 71.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.2e-83 312.8 237 68.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.8e-83 312.4 212 73.1
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 3.7e-83 312.0 221 72.9
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 3.7e-83 312.0 221 71.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 3.7e-83 312.0 221 71.0
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 4.8e-83 311.6 211 73.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 6.3e-83 311.2 211 73.0
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 6.3e-83 311.2 211 73.0
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 8.3e-83 310.8 221 69.2
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 7.0e-82 307.8 224 69.6
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 7.0e-82 307.8 224 69.6
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.0e-81 306.2 206 71.8
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.0e-80 303.9 223 70.0
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 1.9e-79 299.7 199 75.9
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 4.2e-79 298.5 216 68.5
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 2.1e-78 296.2 202 74.3
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 4.7e-78 295.0 216 67.6
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.4e-77 293.5 281 56.9
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 5.2e-77 291.6 210 70.0
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 2.6e-76 289.3 200 71.5
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 4.4e-76 288.5 210 69.0
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.2e-75 286.2 220 65.5
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.1e-71 273.9 167 83.8
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 2.5e-71 272.7 217 64.1
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 8.3e-67 257.7 174 76.4
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 6.8e-61 238.0 284 51.1
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 5.6e-55 218.4 209 52.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 5.2e-53 211.8 206 53.9
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.1e-50 202.2 213 49.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.1e-49 199.9 133 76.7
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 8.1e-46 188.0 116 75.9
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 6.8e-45 184.9 146 68.5
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 8.9e-45 184.5 146 65.8
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 8.9e-45 184.5 206 50.0
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 4.4e-44 182.2 146 65.1
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.4e-44 182.2 137 67.9
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 1.1e-39 167.5 114 76.3
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.5e-39 166.4 174 52.3
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 6.9e-37 158.3 96 79.2
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.4e-34 149.8 122 65.6
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.7e-33 146.4 107 67.3
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.5e-31 140.6 75 84.0
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.5e-31 139.8 75 86.7
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.9e-16 89.4 52 80.8
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 8.7e-16 88.2 47 78.7
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.2e-14 82.0 46 73.9
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 4.5e-12 75.9 154 33.1
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 7.6e-12 75.1 113 45.1
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 6.5e-11 72.0 113 44.2


User provided reference genes

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