Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 3.7e-291 1004.6 680 100.0
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 9.4e-247 857.1 721 77.0
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.4e-210 736.9 674 76.3
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 7.1e-210 734.6 682 76.5
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 1.2e-206 723.8 684 75.6
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.2e-206 723.8 696 74.3
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 2.8e-206 722.6 683 74.4
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 1.3e-203 713.8 685 77.8
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 1.9e-202 709.9 682 76.5
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 4.1e-202 708.8 685 77.8
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.2e-201 707.2 667 80.2
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.1e-201 706.4 673 79.9
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 3.5e-201 705.7 667 80.4
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 7.3e-199 698.0 664 70.9
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 4.7e-198 695.3 676 74.9
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 1.4e-197 693.7 666 75.5
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 1.4e-197 693.7 682 72.6
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 2.4e-197 693.0 680 71.5
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 2.0e-196 689.9 665 72.6
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 2.0e-196 689.9 672 72.2
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 4.4e-196 688.7 668 74.7
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.7e-195 686.8 678 73.6
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 2.9e-195 686.0 630 80.0
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 2.9e-195 686.0 661 74.3
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 3.8e-195 685.6 681 75.9
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 4.9e-195 685.3 679 77.0
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 1.2e-193 680.6 711 63.6
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 1.2e-193 680.6 675 71.6
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 7.8e-193 677.9 683 76.4
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 1.3e-192 677.2 674 73.9
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 1.7e-192 676.8 686 76.5
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 2.3e-192 676.4 686 73.6
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 5.6e-191 671.8 679 74.1
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 5.6e-191 671.8 672 75.4
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 1.3e-190 670.6 679 72.5
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 3.6e-190 669.1 684 68.7
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 3.6e-190 669.1 680 74.7
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 3.6e-190 669.1 675 75.1
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 1.1e-189 667.5 667 69.7
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 1.4e-189 667.2 685 74.0
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.8e-189 666.8 669 74.3
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 1.5e-188 663.7 692 69.5
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 4.5e-188 662.1 680 70.9
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 1.3e-187 660.6 686 72.4
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 2.9e-187 659.4 666 71.6
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 8.4e-187 657.9 686 72.3
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 1.4e-186 657.1 663 72.4
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 3.2e-186 656.0 686 72.4
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 3.2e-186 656.0 686 66.2
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 3.2e-186 656.0 686 62.2
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 7.1e-186 654.8 682 68.6
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 1.6e-185 653.7 682 68.6
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 3.5e-185 652.5 672 69.0
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 4.6e-185 652.1 638 73.0
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 4.6e-185 652.1 638 73.0
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.3e-184 649.8 680 68.4
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 3.9e-184 649.0 662 71.9
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 5.1e-184 648.7 665 74.0
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 5.1e-184 648.7 652 71.5
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 6.7e-184 648.3 657 70.6
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 1.1e-183 647.5 652 71.6
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 1.1e-183 647.5 652 71.6
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 1.5e-183 647.1 682 69.2
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 2.5e-183 646.4 653 71.1
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 2.5e-183 646.4 662 72.1
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 2.5e-183 646.4 652 70.6
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 4.3e-183 645.6 670 72.5
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.3e-183 645.6 660 70.3
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 5.6e-183 645.2 678 72.3
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 9.6e-183 644.4 658 70.1
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 9.6e-183 644.4 674 67.7
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 1.6e-182 643.7 675 69.3
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 3.7e-182 642.5 663 69.7
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 6.2e-182 641.7 670 69.3
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 6.2e-182 641.7 678 72.4
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 8.1e-182 641.3 685 70.2
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 1.4e-181 640.6 660 69.7
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.4e-181 640.6 652 70.1
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 2.4e-181 639.8 664 72.7
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 3.1e-181 639.4 670 72.1
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 6.9e-181 638.3 657 74.1
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 9.0e-181 637.9 673 71.0
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.2e-180 637.5 666 69.1
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 1.2e-180 637.5 649 73.0
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.3e-179 634.0 675 68.3
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.3e-179 634.0 693 67.8
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 6.4e-179 631.7 571 76.9
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.1e-178 630.9 658 69.6
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 2.4e-178 629.8 691 70.9
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 5.5e-178 628.6 680 71.9
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 4.6e-177 625.5 675 69.5
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.9e-176 622.5 667 64.5
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 8.7e-176 621.3 652 69.0
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 8.7e-176 621.3 699 68.8
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.5e-175 620.5 657 69.1
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 2.5e-175 619.8 570 69.8
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 9.0e-173 611.3 647 66.6
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 2.2e-171 606.7 659 62.5
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 3.8e-171 605.9 604 75.5
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 6.0e-169 598.6 682 72.7
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 8.7e-168 594.7 568 71.3
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 1.1e-167 594.3 668 69.3
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 1.3e-166 590.9 649 68.6
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 2.2e-166 590.1 619 69.8
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.5e-164 583.9 653 56.5
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 4.1e-157 559.3 678 62.1
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.2e-156 557.8 658 62.5
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.5e-156 557.4 737 66.2
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 2.6e-156 556.6 652 65.2
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.9e-154 550.4 531 81.9
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 4.2e-154 549.3 676 65.8
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 4.1e-149 532.7 576 70.7
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 2.2e-139 500.4 524 71.9
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 1.4e-136 491.1 614 59.3
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 5.2e-136 489.2 524 74.6
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 1.5e-135 487.6 505 76.8
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 2.4e-133 480.3 688 52.3
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 3.5e-132 476.5 521 72.6
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 9.8e-127 458.4 678 51.2
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 3.1e-117 426.8 674 49.3
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.7e-115 421.0 634 49.8
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 6.6e-115 419.1 526 58.7
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 4.4e-103 379.8 305 68.9
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 4.1e-101 373.2 509 54.8
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 1.1e-98 365.2 268 68.3
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.3e-98 363.2 253 71.5
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 9.5e-98 362.1 295 64.7
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.9e-91 340.1 472 66.9
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 2.5e-90 337.4 452 44.2
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 3.0e-83 313.9 477 56.4
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 2.5e-82 310.8 225 79.6
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 4.8e-73 280.0 230 66.1
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 1.4e-72 278.5 310 51.6
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 3.1e-72 277.3 285 57.2
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 3.8e-62 243.8 319 73.0
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 4.9e-62 243.4 243 52.7
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 4.2e-61 240.4 286 82.5
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 1.0e-59 235.7 167 82.6
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 1.5e-58 231.9 299 46.8
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 5.3e-56 223.4 293 48.5
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 1.5e-55 221.9 138 80.4
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 4.3e-50 203.8 299 44.8
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 2.6e-47 194.5 111 86.5
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.5e-45 188.0 289 82.4
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 4.2e-45 187.2 111 83.8
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.2e-44 185.7 231 46.8
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 2.5e-37 161.4 86 82.6
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.6e-36 158.7 187 55.6
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 1.8e-35 155.2 166 53.6
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-31 141.7 319 58.6
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.0e-30 139.4 95 72.6
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.9e-29 135.2 98 69.4
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.2e-29 134.4 98 71.4
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 9.4e-29 132.9 107 63.6
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-28 132.1 122 52.5
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 6.1e-20 103.6 69 73.9
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 7.5e-18 96.7 572 30.9
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 3.7e-17 94.4 172 36.6
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 8.3e-17 93.2 165 42.4
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 7.0e-16 90.1 68 64.7
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 1.6e-15 89.0 62 69.4
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.7e-15 88.2 68 64.7
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 1.0e-14 86.3 63 66.7
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 1.1e-13 82.8 148 35.8
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 3.2e-13 81.3 64 62.5
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 5.5e-13 80.5 195 29.2
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.0e-11 76.3 54 64.8
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 9.8e-10 69.7 124 40.3
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 1.3e-09 69.3 47 70.2
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 1.3e-09 69.3 556 28.6
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 2.2e-09 68.6 59 57.6
BcaC04g21445 Brassica carinata HOM05D000349 ORTHO05D001782 8.3e-09 66.6 57 57.9
Oeu049536.1 Olea europaea HOM05D003766 ORTHO05D004607 3.1e-08 64.7 197 32.5
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 5.4e-08 63.9 118 36.4
EL10Ac8g19330 Beta vulgaris HOM05D003766 ORTHO05D004607 4.5e-07 60.8 68 50.0
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 5.9e-07 60.5 54 53.7
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 7.7e-07 60.1 38 68.4
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 2.3e-06 58.5 44 63.6


User provided reference genes

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