Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 8.7e-289 996.5 595 100.0
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 3.1e-185 652.5 530 69.2
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 6.9e-185 651.4 531 67.6
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 2.0e-184 649.8 529 69.6
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 1.7e-183 646.7 529 68.8
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.9e-183 646.0 527 66.0
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 6.4e-183 644.8 530 70.8
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 4.2e-182 642.1 521 70.2
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 4.6e-181 638.6 529 66.4
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.0e-180 637.5 534 69.1
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 3.0e-180 636.0 521 69.7
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 8.7e-180 634.4 546 66.8
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.9e-179 633.3 529 71.6
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 3.3e-179 632.5 539 64.6
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 4.3e-179 632.1 546 66.3
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 5.6e-179 631.7 529 71.8
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 1.6e-178 630.2 530 68.9
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 1.4e-177 627.1 523 64.6
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 2.4e-177 626.3 553 66.5
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.4e-177 626.3 529 68.8
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 4.0e-177 625.5 540 67.6
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.6e-176 622.9 539 70.7
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.6e-176 622.9 539 70.3
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 8.4e-175 617.8 554 66.4
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 1.4e-174 617.1 526 64.8
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 1.4e-174 617.1 530 68.1
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 4.2e-174 615.5 546 63.4
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.6e-173 613.6 531 70.8
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 3.5e-173 612.5 540 69.6
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 4.6e-173 612.1 519 65.1
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 7.9e-173 611.3 554 67.3
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 7.9e-173 611.3 524 63.5
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.8e-172 610.1 543 62.8
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 5.1e-172 608.6 519 63.0
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 6.7e-172 608.2 543 64.6
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 6.7e-172 608.2 512 70.3
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 8.7e-172 607.8 530 64.3
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.1e-171 607.4 524 64.1
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.5e-171 607.1 529 69.8
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 3.3e-171 605.9 546 68.3
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 9.6e-171 604.4 530 60.8
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 1.6e-170 603.6 524 63.2
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.7e-170 602.4 524 62.6
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 6.2e-170 601.7 556 64.6
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 3.1e-169 599.4 529 66.5
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 4.1e-169 599.0 527 62.8
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 6.9e-169 598.2 518 63.5
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 1.5e-168 597.0 558 60.0
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.8e-168 595.1 529 67.5
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.0e-167 594.3 524 61.5
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 3.8e-167 592.4 552 63.8
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 3.8e-167 592.4 410 79.0
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 4.2e-166 589.0 537 65.7
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 9.3e-166 587.8 545 63.7
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 9.3e-166 587.8 532 60.3
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 2.7e-165 586.3 529 67.5
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 7.9e-165 584.7 534 62.7
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.8e-164 583.6 549 64.5
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 3.0e-164 582.8 516 62.4
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.5e-163 580.5 523 61.0
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 2.5e-163 579.7 528 64.0
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 3.3e-163 579.3 522 63.6
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 3.3e-163 579.3 546 60.6
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 3.3e-163 579.3 548 60.0
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 7.4e-163 578.2 528 63.4
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 4.8e-162 575.5 523 58.5
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 6.3e-162 575.1 560 57.1
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 8.2e-162 574.7 535 63.4
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 8.2e-162 574.7 532 63.9
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 2.0e-160 570.1 525 63.6
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 2.0e-160 570.1 523 64.2
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 4.5e-160 568.9 527 66.8
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 7.7e-160 568.2 551 59.9
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 1.7e-159 567.0 553 60.8
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.2e-159 566.6 527 66.2
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.2e-159 566.6 546 58.8
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.9e-159 566.2 535 64.3
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 2.9e-159 566.2 506 66.0
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 3.8e-159 565.8 561 62.2
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 6.5e-159 565.1 447 65.5
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.5e-158 563.1 518 64.7
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 2.1e-157 560.1 491 63.7
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 3.6e-157 559.3 527 62.6
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 4.6e-157 558.9 547 59.8
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 1.4e-156 557.4 494 63.0
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.8e-156 557.0 538 57.6
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.5e-155 553.1 545 59.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 3.7e-154 549.3 436 70.4
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.0e-151 541.2 549 60.7
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 1.1e-150 537.7 560 60.0
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 3.9e-148 529.3 504 60.3
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.1e-145 521.2 524 60.5
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.7e-141 506.5 474 62.2
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.8e-138 496.5 505 57.0
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.1e-134 484.6 548 50.4
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 1.2e-133 481.1 505 54.9
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.1e-121 441.4 521 52.4
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 1.3e-106 391.3 478 48.7
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 5.2e-84 316.2 262 59.5
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 9.3e-65 252.3 421 40.4
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 9.3e-65 252.3 421 40.4
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 6.2e-61 239.6 424 41.0
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.5e-51 208.4 384 36.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.5e-25 122.1 189 40.7
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 2.2e-21 108.2 155 40.6
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.0e-20 103.2 189 39.2
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 4.8e-13 80.5 187 31.0
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.9e-10 71.2 99 48.5
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.2e-09 66.6 276 28.3
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.0e-07 62.8 85 37.6


User provided reference genes

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