Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014580.2 Olea europaea HOM05D004785 ORTHO05D005704 8.4e-192 673.7 385 100.0
SalBow5G0866 Salvia bowleyana HOM05D004785 ORTHO05D005704 7.0e-122 441.4 374 72.5
SalBow5G5194 Salvia bowleyana HOM05D004785 ORTHO05D005704 7.0e-122 441.4 374 72.5
Cc02_g27530 Coffea canephora HOM05D004785 ORTHO05D005704 3.2e-119 432.6 379 65.2
Dinv43463 Davidia involucrata HOM05D004785 ORTHO05D005704 1.7e-115 420.2 392 62.2
Migut.N01482 Erythranthe guttata HOM05D004785 ORTHO05D005704 1.1e-114 417.5 374 61.5
GSVIVG01032056001 Vitis vinifera HOM05D004785 ORTHO05D005704 1.6e-113 413.7 380 66.3
MSTRG.20603 Avicennia marina HOM05D004785 ORTHO05D005704 2.7e-113 412.9 374 62.6
SalBow4G2313 Salvia bowleyana HOM05D004785 ORTHO05D005704 2.9e-112 409.5 375 60.8
PGSC0003DMG400025264 Solanum tuberosum HOM05D004785 ORTHO05D005704 3.8e-112 409.1 375 62.7
CSS0030425 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 1.5e-111 407.1 379 67.0
Dinv09378 Davidia involucrata HOM05D004785 ORTHO05D005704 2.5e-111 406.4 433 56.6
CSS0016942 Camellia sinensis var. sinensis HOM05D004785 ORTHO05D005704 3.3e-111 406.0 379 66.8
Solyc01g086890.3 Solanum lycopersicum HOM05D004785 ORTHO05D005704 2.1e-110 403.3 375 61.6
Sopen01g033900 Solanum pennellii HOM05D004785 ORTHO05D005704 2.1e-110 403.3 375 61.6
CAN.G170.130 Capsicum annuum HOM05D004785 ORTHO05D005704 6.1e-110 401.7 376 61.7
Hma1.2p1_0845F.1_g227490 Hydrangea macrophylla HOM05D004785 ORTHO05D005704 1.0e-109 401.0 386 64.2
Potri.001G269900 Populus trichocarpa HOM05D004785 ORTHO05D005704 6.8e-109 398.3 377 59.7
COL.COLO4_23900 Corchorus olitorius HOM05D004785 ORTHO05D005704 4.1e-106 389.0 377 66.8
TAR636G1066 Trochodendron aralioides HOM05D004785 ORTHO05D005704 4.1e-106 389.0 373 60.1
Thecc.01G414000 Theobroma cacao HOM05D004785 ORTHO05D005704 9.2e-106 387.9 377 59.7
Rhsim01G0130900 Rhododendron simsii HOM05D004785 ORTHO05D005704 2.0e-105 386.7 373 60.1
Nitab4.5_0006850g0010 Nicotiana tabacum HOM05D004785 ORTHO05D005704 4.6e-105 385.6 373 58.7
Sabra09G0047800 Salix brachista HOM05D004785 ORTHO05D005704 1.3e-104 384.0 377 64.2
Manes.10G146300 Manihot esculenta HOM05D004785 ORTHO05D005704 1.7e-104 383.6 378 63.8
TAR633G2005 Trochodendron aralioides HOM05D004785 ORTHO05D005704 3.9e-104 382.5 380 63.9
Duzib138G0206 Durio zibethinus HOM05D004785 ORTHO05D005704 1.1e-103 380.9 375 58.4
Nn7g36099 Nelumbo nucifera HOM05D004785 ORTHO05D005704 1.9e-103 380.2 380 60.8
RcHm_v2.0_Chr1g0314901 Rosa chinensis HOM05D004785 ORTHO05D005704 5.6e-103 378.6 375 59.5
unitig_61.g26449 Utricularia gibba HOM05D004785 ORTHO05D005704 7.3e-103 378.3 374 63.6
CiPaw.13G002800 Carya illinoinensis HOM05D004785 ORTHO05D005704 9.5e-103 377.9 380 57.6
Potri.009G064600 Populus trichocarpa HOM05D004785 ORTHO05D005704 9.5e-103 377.9 377 58.1
Sabra16G0165300 Salix brachista HOM05D004785 ORTHO05D005704 9.5e-103 377.9 393 62.3
Manes.07G003900 Manihot esculenta HOM05D004785 ORTHO05D005704 1.2e-102 377.5 384 63.5
FAN10G3515 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.1e-102 376.7 374 59.1
Prupe.2G009600 Prunus persica HOM05D004785 ORTHO05D005704 2.1e-102 376.7 376 59.3
FvH4_7g00680 Fragaria vesca HOM05D004785 ORTHO05D005704 3.6e-102 375.9 374 59.1
FAN06G5068 Fragaria x ananassa HOM05D004785 ORTHO05D005704 3.6e-102 375.9 374 59.1
vmacro21177 Vaccinium macrocarpon HOM05D004785 ORTHO05D005704 1.1e-101 374.4 373 61.1
FAN01G2446 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.4e-101 374.0 374 58.6
FAN01G2822 Fragaria x ananassa HOM05D004785 ORTHO05D005704 1.4e-101 374.0 374 58.8
FAN03G2451 Fragaria x ananassa HOM05D004785 ORTHO05D005704 2.3e-101 373.2 374 59.1
CANSAT11G0943 Cannabis sativa HOM05D004785 ORTHO05D005704 3.1e-101 372.9 374 64.4
Cpa.g.sc234.14 Carica papaya HOM05D004785 ORTHO05D005704 2.6e-100 369.8 404 53.5
SGA_v2.0_scaffold95G28788 Striga asiatica HOM05D004785 ORTHO05D005704 7.5e-100 368.2 398 61.1
Actinidia20681 Actinidia chinensis HOM05D004785 ORTHO05D005704 2.2e-99 366.7 379 62.5
Gohir.D08G037900 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.9e-98 363.6 374 57.2
Phvul.005G036800 Phaseolus vulgaris HOM05D004785 ORTHO05D005704 4.1e-98 362.5 380 55.0
QL04p005208 Quercus lobata HOM05D004785 ORTHO05D005704 5.4e-98 362.1 383 56.9
Sed0027076 Sechium edule HOM05D004785 ORTHO05D005704 7.0e-98 361.7 380 54.5
VMungo1080G1418 Vigna mungo HOM05D004785 ORTHO05D005704 7.0e-98 361.7 380 55.3
Gorai.004G035900 Gossypium raimondii HOM05D004785 ORTHO05D005704 1.2e-97 360.9 379 56.5
Peaxi162Scf00428g00096 Petunia axillaris HOM05D004785 ORTHO05D005704 1.2e-97 360.9 375 63.2
Sed0007108 Sechium edule HOM05D004785 ORTHO05D005704 1.2e-97 360.9 387 55.0
MBI04_g14260_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 6.0e-97 358.6 380 55.5
HanXRQChr15g0479141 Helianthus annuus HOM05D004785 ORTHO05D005704 1.7e-96 357.1 373 56.8
arahy.Tifrunner.gnm1.ann1.59DMFX Arachis hypogaea HOM05D004785 ORTHO05D005704 2.3e-96 356.7 380 55.5
MD07G1006500 Malus domestica HOM05D004785 ORTHO05D005704 3.0e-96 356.3 428 52.6
Glyma.08G152600 Glycine max HOM05D004785 ORTHO05D005704 5.0e-96 355.5 387 55.0
TWI09G1360 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 6.6e-96 355.1 390 61.0
Ciclev10031609m.g Citrus clementina HOM05D004785 ORTHO05D005704 1.1e-95 354.4 380 62.6
arahy.Tifrunner.gnm1.ann1.M8XEBR Arachis hypogaea HOM05D004785 ORTHO05D005704 2.5e-95 353.2 380 54.7
THA.LOC104801982 Tarenaya hassleriana HOM05D004785 ORTHO05D005704 2.5e-95 353.2 378 56.3
Atru.chr11.2638 Acer truncatum HOM05D004785 ORTHO05D005704 3.3e-95 352.8 385 62.3
MELO3C023531.2 Cucumis melo HOM05D004785 ORTHO05D005704 5.6e-95 352.1 387 54.8
Lsat_1_v5_gn_4_68280 Lactuca sativa HOM05D004785 ORTHO05D005704 7.3e-95 351.7 375 62.4
CsaV3_7G031250 Cucumis sativus L. HOM05D004785 ORTHO05D005704 1.6e-94 350.5 385 55.3
ECA246G0971 Erigeron canadensis HOM05D004785 ORTHO05D005704 2.3e-93 346.7 373 55.0
Lalb_Chr19g0132061 Lupinus albus HOM05D004785 ORTHO05D005704 3.1e-93 346.3 381 54.1
TWI73G0859 Tripterygium wilfordii HOM05D004785 ORTHO05D005704 5.2e-93 345.5 385 58.7
Glyma.15G272000 Glycine max HOM05D004785 ORTHO05D005704 3.4e-92 342.8 378 53.2
Lalb_Chr01g0008111 Lupinus albus HOM05D004785 ORTHO05D005704 3.4e-92 342.8 383 54.6
Lj3g0000927 Lotus japonicus HOM05D004785 ORTHO05D005704 5.8e-92 342.0 380 52.4
Duzib268G1355 Durio zibethinus HOM05D004785 ORTHO05D005704 9.9e-92 341.3 376 53.2
Nn2g15504 Nelumbo nucifera HOM05D004785 ORTHO05D005704 1.3e-91 340.9 375 55.7
Sc15g0001680 Simmondsia chinensis HOM05D004785 ORTHO05D005704 2.4e-90 336.7 376 58.8
Gohir.A08G027150 Gossypium hirsutum HOM05D004785 ORTHO05D005704 7.1e-90 335.1 375 55.2
TPR.G21739 Trifolium pratense HOM05D004785 ORTHO05D005704 9.2e-90 334.7 386 53.4
Aqoxy1G00294 Aquilegia oxysepala HOM05D004785 ORTHO05D005704 1.6e-89 334.0 377 54.9
Psat4g149360 Pisum sativum HOM05D004785 ORTHO05D005704 2.1e-89 333.6 383 53.0
Eucgr.J01259 Eucalyptus grandis HOM05D004785 ORTHO05D005704 3.5e-89 332.8 373 59.2
PGR044G1403 Punica granatum HOM05D004785 ORTHO05D005704 6.0e-89 332.0 374 61.2
Hund07648 Selenicereus undatus HOM05D004785 ORTHO05D005704 7.8e-89 331.6 373 58.4
Eucgr.G03395 Eucalyptus grandis HOM05D004785 ORTHO05D005704 2.3e-88 330.1 369 57.7
Lj3g0006296 Lotus japonicus HOM05D004785 ORTHO05D005704 2.3e-88 330.1 379 54.1
AUR62022266 Chenopodium quinoa HOM05D004785 ORTHO05D005704 4.3e-87 325.9 378 57.4
Hund03669 Selenicereus undatus HOM05D004785 ORTHO05D005704 7.3e-87 325.1 370 54.6
Thhalv10010376m.g Eutrema salsugineum HOM05D004785 ORTHO05D005704 1.2e-86 324.3 384 51.0
Sp5g10160 Schrenkiella parvula HOM05D004785 ORTHO05D005704 8.1e-86 321.6 390 50.5
PSO384G1867 Papaver somniferum HOM05D004785 ORTHO05D005704 1.1e-85 321.2 382 56.0
AT3G52120 Arabidopsis thaliana HOM05D004785 ORTHO05D005704 1.4e-85 320.9 383 49.9
PSO339G6673 Papaver somniferum HOM05D004785 ORTHO05D005704 5.2e-85 318.9 381 56.2
Carub.0005s1846 Capsella rubella HOM05D004785 ORTHO05D005704 8.9e-85 318.2 384 50.8
Medtr8g036890 Medicago truncatula HOM05D004785 ORTHO05D005704 2.0e-84 317.0 383 50.9
Ca_23868_v3 Cicer arietinum L. HOM05D004785 ORTHO05D005704 3.4e-84 316.2 378 58.2
Actinidia21563 Actinidia chinensis HOM05D004785 ORTHO05D005704 6.4e-83 312.0 374 58.6
MBI01_g36433_MAGBIO Magnolia biondii HOM05D004785 ORTHO05D005704 2.7e-81 306.6 380 51.6
CDE10G0170 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 7.8e-81 305.1 382 51.3
A09p45180 Brassica napus HOM05D004785 ORTHO05D005704 1.3e-80 304.3 390 50.3
Aa31LG10G7210 Aethionema arabicum HOM05D004785 ORTHO05D005704 1.7e-80 303.9 421 47.0
AL5G32690 Arabidopsis lyrata HOM05D004785 ORTHO05D005704 1.7e-80 303.9 403 47.6
BraA09t39981Z Brassica rapa HOM05D004785 ORTHO05D005704 5.1e-80 302.4 386 50.8
EL10Ac9g21166 Beta vulgaris HOM05D004785 ORTHO05D005704 1.1e-79 301.2 379 55.4
BolC8t50356H Brassica oleracea HOM05D004785 ORTHO05D005704 3.6e-78 296.2 386 49.7
HPP92_022791 Vanilla planifolia HOM05D004785 ORTHO05D005704 3.1e-77 293.1 376 56.9
C08p27390 Brassica napus HOM05D004785 ORTHO05D005704 5.2e-77 292.4 386 49.5
ATR0733G146 Amborella trichopoda HOM05D004785 ORTHO05D005704 2.0e-76 290.4 393 55.7
BcaNung06094 Brassica carinata HOM05D004785 ORTHO05D005704 5.4e-74 282.3 385 48.8
MD02G1315400 Malus domestica HOM05D004785 ORTHO05D005704 5.4e-74 282.3 283 59.7
SEGI_00751 Sequoiadendron giganteum HOM05D004785 ORTHO05D005704 9.3e-74 281.6 379 55.9
Nitab4.5_0001542g0040 Nicotiana tabacum HOM05D004785 ORTHO05D005704 1.2e-73 281.2 261 59.8
CDE10G1291 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 6.9e-69 265.4 379 45.1
Lj7C568G16 Lonicera japonica HOM05D004785 ORTHO05D005704 1.5e-68 264.2 382 50.0
AUR62031974 Chenopodium quinoa HOM05D004785 ORTHO05D005704 2.9e-67 260.0 380 50.8
unitig_0.g1380 Utricularia gibba HOM05D004785 ORTHO05D005704 1.6e-62 244.2 253 62.5
Haze_03237 Corylus avellana HOM05D004785 ORTHO05D005704 3.7e-62 243.0 214 64.5
Mapoly0063s0041 Marchantia polymorpha HOM05D004785 ORTHO05D005704 1.2e-60 238.0 412 40.3
CDE04G1996 Ceratophyllum demersum HOM05D004785 ORTHO05D005704 3.4e-60 236.5 315 46.0
Medtr8g036260 Medicago truncatula HOM05D004785 ORTHO05D005704 4.5e-60 236.1 288 51.4
Zm00001eb325220 Zea mays HOM05D004785 ORTHO05D005704 2.3e-56 223.8 370 46.2
SMO358G0717 Selaginella moellendorffii HOM05D004785 ORTHO05D005704 2.9e-51 206.8 380 40.3
Pp3c7_22470 Physcomitrium patens HOM05D004785 ORTHO05D005704 1.4e-50 204.5 415 40.2
DCAR_029653 Daucus carota HOM05D004785 ORTHO05D005704 1.3e-48 198.0 373 42.1
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 6.7e-48 195.7 451 36.4
Oeu006578.1 Olea europaea HOM05D004785 ORTHO05D005704 1.0e-43 181.8 218 54.1
Gohir.A08G145800 Gossypium hirsutum HOM05D004785 ORTHO05D005704 1.7e-43 181.0 355 43.1
SHI47607 Sapria himalayana HOM05D004785 ORTHO05D005704 2.2e-43 180.6 263 42.2
SHI47732 Sapria himalayana HOM05D004785 ORTHO05D005704 2.2e-43 180.6 263 42.2
Gohir.D08G166700 Gossypium hirsutum HOM05D004785 ORTHO05D005704 2.5e-42 177.2 286 46.9
Gorai.004G174100 Gossypium raimondii HOM05D004785 ORTHO05D005704 3.2e-42 176.8 286 47.2
AagrBONN_evm.TU.Sc2ySwM_228.206 Anthoceros agrestis HOM05D004785 ORTHO05D005704 1.6e-41 174.5 298 40.3
TAR623G0847 Trochodendron aralioides HOM05D004785 ORTHO05D005704 4.2e-34 149.8 191 48.7
Pp3c11_4770 Physcomitrium patens HOM05D004785 ORTHO05D005704 2.6e-28 130.6 292 41.1
Pp3c11_4670 Physcomitrium patens HOM05D004785 ORTHO05D005704 1.7e-27 127.9 248 43.1
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 1.4e-21 108.2 57 86.0
Eucgr.A02263 Eucalyptus grandis HOM05D004785 ORTHO05D005704 4.1e-21 106.7 64 78.1
CARHR161860 Cardamine hirsuta HOM05D004785 ORTHO05D005704 2.6e-20 104.0 58 81.0
A04p07240 Brassica napus HOM05D004785 ORTHO05D005704 5.0e-19 99.8 58 77.6
BraA04t16419Z Brassica rapa HOM05D004785 ORTHO05D005704 5.0e-19 99.8 58 77.6
BolC4t25664H Brassica oleracea HOM05D004785 ORTHO05D005704 6.5e-19 99.4 109 46.8
BcaC02g09278 Brassica carinata HOM05D004785 ORTHO05D005704 9.4e-18 95.5 58 74.1
C04p40800 Brassica napus HOM05D004785 ORTHO05D005704 9.4e-18 95.5 58 74.1
Eucgr.B02099 Eucalyptus grandis HOM05D004785 ORTHO05D005704 2.7e-17 94.0 60 73.3
unitig_0.g1381 Utricularia gibba HOM05D004785 ORTHO05D005704 1.5e-15 88.2 93 61.3
CARHR161850 Cardamine hirsuta HOM05D004785 ORTHO05D005704 9.7e-15 85.5 133 44.4
AagrBONN_evm.TU.Sc2ySwM_228.74 Anthoceros agrestis HOM05D004785 ORTHO05D005704 8.2e-14 82.4 56 73.2
MCO15G372 Micromonas commoda HOM05D004785 ORTHO05D005704 1.0e-11 75.5 59 59.3
Cre16.g686000 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D005704 5.0e-11 73.2 60 55.0
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 3.7e-06 57.0 67 43.3


User provided reference genes

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