Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 9.5e-119 430.3 226 100.0
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.3e-107 393.3 226 91.6
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.3e-75 287.0 226 66.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 1.9e-66 256.5 223 61.9
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 4.2e-66 255.4 226 61.5
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.7e-65 252.7 227 62.1
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.7e-65 252.7 241 61.0
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 4.6e-65 251.9 226 62.4
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 7.9e-65 251.1 224 61.2
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 8.7e-64 247.7 226 63.7
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 9.6e-63 244.2 231 58.0
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.3e-62 243.8 226 60.6
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 6.2e-62 241.5 226 59.7
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.1e-61 240.7 225 57.8
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.8e-61 240.0 227 60.4
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 3.1e-61 239.2 231 59.3
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.2e-60 237.3 227 61.2
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.2e-60 237.3 227 60.4
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 3.4e-60 235.7 219 57.1
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 3.4e-60 235.7 230 58.7
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 4.5e-60 235.3 230 59.1
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.2e-59 233.0 225 59.6
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.1e-58 230.7 228 58.3
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.1e-58 230.7 231 58.0
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.9e-58 229.9 226 58.4
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.9e-58 229.9 226 58.4
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 3.2e-58 229.2 226 59.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 7.1e-58 228.0 227 56.4
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.7e-57 226.1 228 57.5
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.5e-57 225.7 226 57.5
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 3.9e-56 222.2 228 57.0
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 5.1e-56 221.9 232 56.9
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.9e-55 219.9 225 59.1
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.6e-54 216.9 226 58.8
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.6e-54 216.9 223 57.0
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 2.1e-54 216.5 226 52.7
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.8e-54 215.3 227 55.1
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 1.1e-53 214.2 229 58.1
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.1e-53 214.2 219 55.3
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.8e-53 213.4 230 55.2
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.4e-53 213.0 222 55.0
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.1e-53 212.6 228 56.1
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 4.1e-53 212.2 226 50.0
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.3e-53 211.8 228 56.1
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.9e-53 211.5 229 57.2
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 9.0e-53 211.1 236 53.0
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.4e-52 209.1 228 53.9
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 1.0e-51 207.6 226 54.9
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.7e-51 206.8 225 57.3
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.9e-50 203.4 227 56.8
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 3.2e-50 202.6 230 54.8
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 3.2e-50 202.6 156 67.3
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 3.2e-50 202.6 232 53.0
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 5.5e-50 201.8 224 51.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.2e-49 200.7 229 52.8
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.2e-49 200.7 234 53.0
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.6e-49 200.3 236 52.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 7.9e-49 198.0 173 61.8
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.0e-48 197.6 222 53.2
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 3.0e-48 196.1 228 53.5
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 3.9e-48 195.7 229 52.0
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 6.7e-48 194.9 271 46.5
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.9e-47 193.4 226 49.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.5e-47 193.0 227 48.5
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.7e-47 191.8 226 49.1
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 7.4e-47 191.4 228 52.2
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 7.4e-47 191.4 231 49.8
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.6e-46 190.3 224 52.2
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.6e-46 190.3 232 48.7
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.2e-46 189.9 219 50.2
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 3.7e-46 189.1 226 47.8
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 4.8e-46 188.7 226 49.1
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 8.2e-46 188.0 230 49.1
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 5.3e-45 185.3 228 50.4
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 2.6e-44 183.0 229 49.8
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 2.6e-44 183.0 234 49.1
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 4.5e-44 182.2 227 49.8
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 5.9e-44 181.8 230 50.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.3e-43 180.6 202 53.5
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.7e-43 180.3 228 49.1
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.7e-43 180.3 223 51.1
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 3.2e-42 176.0 232 46.6
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 5.5e-42 175.3 226 50.4
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 5.5e-42 175.3 242 45.5
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 9.4e-42 174.5 226 48.7
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.2e-41 174.1 225 51.1
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.7e-41 172.9 226 45.6
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.6e-41 172.2 226 47.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 6.1e-41 171.8 226 46.5
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 7.9e-41 171.4 229 47.6
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 5.1e-40 168.7 226 44.7
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.1e-39 167.5 129 69.8
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.1e-39 167.5 161 60.2
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.2e-38 163.3 229 48.0
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 6.9e-37 158.3 127 66.1
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 2.9e-35 152.9 219 45.7
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.4e-34 150.6 240 44.6
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 4.7e-33 145.6 328 36.3
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 6.1e-33 145.2 181 50.8
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.8e-32 143.7 228 43.4
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.8e-32 143.7 228 39.9
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 3.0e-32 142.9 228 40.4
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 6.3e-30 135.2 228 39.5
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 9.1e-29 131.3 133 53.4
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 5.5e-26 122.1 124 52.4
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 7.2e-26 121.7 124 54.0
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.6e-25 120.6 225 36.9
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.1e-18 97.8 237 31.2
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 9.4e-18 94.7 243 31.7
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.0e-17 91.7 56 76.8
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 5.7e-15 85.5 221 32.6
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 7.7e-12 75.1 117 43.6
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 3.8e-11 72.8 96 47.9
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 1.5e-10 70.9 96 51.0
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 9.4e-10 68.2 103 44.7
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 6.1e-09 65.5 212 33.0
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 1.8e-08 63.9 101 39.6
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.2e-07 61.2 49 61.2
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 1.5e-07 60.8 88 39.8
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 3.4e-07 59.7 91 33.0
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 4.4e-07 59.3 91 31.9
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 1.3e-06 57.8 82 39.0
AT5G55856 Arabidopsis thaliana HOM05D000984 ORTHO05D001096 8.3e-06 55.1 77 32.5


User provided reference genes

Program Settings