Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014156.1 Olea europaea HOM05D003919 ORTHO05D036952 3.9e-90 334.7 161 100.0
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.2e-43 180.3 147 66.7
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 2.5e-28 129.4 165 43.6
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 1.8e-26 123.2 165 42.4
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 1.8e-26 123.2 151 43.7
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 5.1e-26 121.7 172 39.0
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 1.9e-25 119.8 165 40.0
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 5.7e-25 118.2 175 38.9
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 5.7e-25 118.2 164 41.5
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 5.7e-25 118.2 166 39.8
Oeu025294.1 Olea europaea HOM05D003919 ORTHO05D036952 7.4e-25 117.9 148 50.0
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 4.8e-24 115.2 166 39.8
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 6.3e-24 114.8 165 39.4
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 6.3e-24 114.8 165 40.0
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 8.2e-24 114.4 152 40.8
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 2.4e-23 112.8 165 40.6
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 4.1e-23 112.1 165 38.8
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 5.3e-23 111.7 173 37.6
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 5.3e-23 111.7 165 38.8
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 6.9e-23 111.3 172 36.0
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 1.2e-22 110.5 165 38.8
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 1.2e-22 110.5 150 39.3
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 1.2e-22 110.5 146 40.4
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 2.0e-22 109.8 165 38.2
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 2.0e-22 109.8 165 37.6
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 2.0e-22 109.8 165 38.2
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.0e-21 107.5 165 38.2
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 1.0e-21 107.5 163 37.4
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 1.7e-21 106.7 157 38.2
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 1.7e-21 106.7 163 36.8
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 2.2e-21 106.3 164 39.0
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 2.9e-21 105.9 164 38.4
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 2.9e-21 105.9 157 39.5
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 2.9e-21 105.9 159 39.6
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 3.8e-21 105.5 163 38.0
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 3.8e-21 105.5 158 40.5
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 5.0e-21 105.1 158 39.9
TAR374G1126 Trochodendron aralioides HOM05D003919 ORTHO05D036952 5.0e-21 105.1 165 37.6
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 5.0e-21 105.1 165 37.6
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 6.5e-21 104.8 164 37.2
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 8.5e-21 104.4 157 39.5
CAN.G157.23 Capsicum annuum HOM05D003919 ORTHO05D004906 1.1e-20 104.0 151 38.4
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.1e-20 104.0 161 36.0
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.4e-20 103.6 168 35.7
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 1.9e-20 103.2 163 36.2
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.9e-20 103.2 164 37.8
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.9e-20 103.2 168 35.7
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 1.9e-20 103.2 162 39.5
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 2.5e-20 102.8 157 40.1
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 2.5e-20 102.8 158 39.9
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 2.5e-20 102.8 160 37.5
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 4.2e-20 102.1 161 36.6
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.2e-19 100.5 160 36.9
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.6e-19 100.1 168 34.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 1.6e-19 100.1 158 38.6
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 2.1e-19 99.8 157 38.2
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 3.6e-19 99.0 168 34.5
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 6.1e-19 98.2 170 34.1
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 1.4e-18 97.1 158 38.6
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 1.4e-18 97.1 169 34.9
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 1.8e-18 96.7 176 35.2
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 2.3e-18 96.3 160 35.6
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 3.0e-18 95.9 163 33.7
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 3.0e-18 95.9 163 37.4
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 5.1e-18 95.1 158 39.2
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 1.1e-17 94.0 161 36.6
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 1.5e-17 93.6 158 36.1
CDE08G0032 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 2.0e-17 93.2 166 33.7
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 3.3e-17 92.4 151 35.1
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 3.3e-17 92.4 151 35.1
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 5.7e-17 91.7 152 32.2
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 5.7e-17 91.7 160 33.1
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 7.4e-17 91.3 171 32.2
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 7.4e-17 91.3 149 34.2
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 7.4e-17 91.3 172 34.9
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 1.7e-16 90.1 152 32.9
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 6.3e-16 88.2 177 31.1
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 6.3e-16 88.2 152 30.3
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 6.3e-16 88.2 150 32.0
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 8.2e-16 87.8 160 35.0
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 1.1e-15 87.4 162 29.6
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 1.8e-15 86.7 162 30.9
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 5.3e-15 85.1 152 31.6
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 5.3e-15 85.1 152 31.6
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 5.3e-15 85.1 152 30.3
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 5.3e-15 85.1 152 30.3
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 8.5e-13 77.8 152 30.3
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 2.6e-09 66.2 152 30.9
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 4.1e-07 58.9 141 27.0
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 5.3e-07 58.5 162 25.9
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 5.3e-07 58.5 146 26.7
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.2e-06 57.4 140 27.1
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 2.0e-06 56.6 141 28.4
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 2.0e-06 56.6 143 25.2
Lsat_1_v5_gn_5_23900 Lactuca sativa HOM05D003509 ORTHO05D004205 3.5e-06 55.8 50 46.0
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 4.5e-06 55.5 141 27.7


User provided reference genes

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