Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 6.2e-282 973.4 469 100.0
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 1.3e-199 699.9 459 72.3
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.5e-182 642.5 470 66.6
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.6e-181 639.8 451 68.3
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 6.2e-181 637.9 466 66.7
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 3.8e-178 628.6 483 63.6
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 7.1e-177 624.4 469 64.2
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 5.6e-174 614.8 469 62.9
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 3.1e-172 609.0 475 61.7
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.4e-171 605.5 469 63.3
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.4e-170 601.3 507 59.6
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 9.3e-169 597.4 484 64.3
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 5.1e-167 591.7 469 60.8
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 6.2e-165 584.7 470 61.3
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.4e-164 582.8 471 61.8
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 4.0e-164 582.0 471 62.0
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 6.9e-164 581.3 470 63.4
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 2.0e-163 579.7 476 60.7
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 3.4e-163 578.9 478 59.0
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 3.8e-162 575.5 471 61.4
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 3.2e-161 572.4 461 62.3
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 4.2e-161 572.0 471 61.1
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 9.3e-161 570.9 471 60.7
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 3.3e-158 562.4 475 59.2
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 5.6e-158 561.6 483 59.6
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 6.2e-157 558.1 472 57.8
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 9.0e-156 554.3 471 57.7
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 9.0e-156 554.3 497 56.7
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.2e-155 553.9 471 58.0
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 2.6e-155 552.7 476 56.9
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 2.6e-155 552.7 470 58.9
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.0e-154 550.8 470 58.7
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 4.9e-154 548.5 507 56.0
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.4e-153 547.0 473 57.7
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.9e-153 546.6 474 57.6
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 3.2e-153 545.8 475 56.8
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 1.8e-151 540.0 478 55.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 8.7e-151 537.7 377 68.4
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.6e-149 533.5 483 55.5
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 8.2e-149 531.2 474 56.5
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 1.4e-148 530.4 473 55.6
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 6.9e-148 528.1 472 54.9
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.7e-146 523.5 456 57.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 3.8e-146 522.3 473 58.4
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 7.2e-145 518.1 473 54.3
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 2.7e-144 516.2 468 54.9
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 5.1e-143 511.9 516 54.3
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 6.7e-143 511.5 486 54.1
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 8.8e-143 511.1 472 56.6
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 1.1e-142 510.8 526 49.4
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 1.3e-141 507.3 523 51.8
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 4.1e-140 502.3 470 54.5
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 6.9e-140 501.5 474 56.5
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.7e-138 496.9 392 60.5
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.2e-138 496.5 387 64.9
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 3.8e-138 495.7 469 56.1
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.8e-135 486.9 468 53.6
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 6.7e-135 485.0 562 48.4
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 6.3e-133 478.4 330 67.9
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.4e-132 477.2 475 51.8
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 7.0e-132 474.9 470 51.3
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 7.0e-132 474.9 472 52.1
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 4.5e-131 472.2 475 51.6
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.7e-130 470.3 451 54.8
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 2.2e-130 469.9 472 51.1
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 8.5e-130 468.0 471 51.2
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.4e-129 467.2 479 50.3
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 1.4e-129 467.2 468 50.4
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.6e-128 462.6 477 48.4
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 5.2e-127 458.8 472 51.7
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 2.0e-126 456.8 472 49.2
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-125 454.1 467 51.4
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.3e-125 454.1 470 49.6
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 2.0e-123 446.8 512 47.1
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 2.2e-122 443.4 510 49.2
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 2.9e-122 443.0 390 57.9
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 2.5e-121 439.9 519 46.4
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 4.2e-121 439.1 431 56.4
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.0e-119 434.5 475 49.3
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.2e-118 431.0 476 48.7
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 4.5e-115 419.1 467 51.0
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.2e-114 416.8 370 56.5
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 3.8e-114 416.0 462 47.0
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.2e-113 412.5 457 49.0
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 2.6e-110 403.3 330 58.5
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 1.1e-108 397.9 454 48.2
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 2.7e-107 393.3 478 46.2
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.5e-107 392.5 284 66.5
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 6.1e-104 382.1 309 63.4
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 2.3e-103 380.2 283 64.7
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 4.9e-101 372.5 468 42.5
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.8e-100 370.5 254 71.3
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.1e-92 344.7 480 39.8
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 4.6e-91 339.3 282 58.9
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 9.5e-89 331.6 294 56.5
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 2.6e-86 323.6 209 74.2
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 2.6e-86 323.6 286 57.0
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.3e-74 283.9 183 73.8
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 7.3e-73 278.9 507 34.9
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 1.6e-72 277.7 330 47.3
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.6e-62 243.8 188 63.8
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.9e-60 237.7 157 70.1
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.3e-56 224.9 468 32.7
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.4e-55 220.7 227 51.5
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 8.4e-53 212.2 184 56.0
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.4e-52 210.7 165 61.8
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 3.4e-46 190.3 161 55.9
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-43 179.9 362 34.3
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.6e-40 171.4 130 64.6
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 9.7e-33 145.6 192 43.8
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 1.1e-31 142.1 130 53.1
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 8.5e-21 105.9 82 63.4
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 1.6e-19 101.7 258 27.1
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 6.7e-18 96.3 75 61.3
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 2.2e-16 91.3 357 25.5
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 4.1e-15 87.0 53 73.6
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 5.9e-14 83.2 281 26.3
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 1.7e-13 81.6 153 35.3
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 4.8e-08 63.5 81 39.5
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 4.1e-07 60.5 101 33.7
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 5.3e-07 60.1 55 49.1
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 7.0e-07 59.7 43 65.1


User provided reference genes

Program Settings