Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013973.1 Olea europaea HOM05D003586 ORTHO05D004036 4.2e-173 611.3 318 100.0
Oeu060859.1 Olea europaea HOM05D003586 ORTHO05D004036 9.1e-160 567.0 307 96.4
MSTRG.139 Avicennia marina HOM05D003586 ORTHO05D004036 2.2e-113 412.9 306 69.6
SalBow2G0990 Salvia bowleyana HOM05D003586 ORTHO05D004036 3.9e-110 402.1 307 68.1
Dinv06595 Davidia involucrata HOM05D003586 ORTHO05D004036 6.4e-105 384.8 307 66.4
GSVIVG01013976001 Vitis vinifera HOM05D003586 ORTHO05D004036 6.0e-103 378.3 305 64.6
SGA_v2.0_scaffold56G19917 Striga asiatica HOM05D003586 ORTHO05D004036 1.6e-100 370.2 306 64.1
Migut.O00372 Erythranthe guttata HOM05D003586 ORTHO05D004036 1.4e-99 367.1 304 64.8
CSS0004894 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 5.3e-99 365.2 306 63.4
CSS0040773 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 5.3e-99 365.2 306 63.4
Nitab4.5_0005495g0020 Nicotiana tabacum HOM05D003586 ORTHO05D004036 2.9e-97 359.4 306 63.4
Rhsim03G0161600 Rhododendron simsii HOM05D003586 ORTHO05D004036 6.4e-97 358.2 307 62.5
Solyc03g093480.3 Solanum lycopersicum HOM05D003586 ORTHO05D004036 7.1e-96 354.8 306 61.8
Nitab4.5_0003173g0040 Nicotiana tabacum HOM05D003586 ORTHO05D004036 2.1e-95 353.2 306 63.1
Peaxi162Scf00271g00727 Petunia axillaris HOM05D003586 ORTHO05D004036 2.7e-95 352.8 306 62.1
Sopen03g024310 Solanum pennellii HOM05D003586 ORTHO05D004036 3.5e-95 352.4 306 61.4
CAN.G485.20 Capsicum annuum HOM05D003586 ORTHO05D004036 3.0e-94 349.4 308 60.4
QL09p028029 Quercus lobata HOM05D003586 ORTHO05D004036 3.3e-93 345.9 307 59.0
Cc02_g04680 Coffea canephora HOM05D003586 ORTHO05D004036 4.3e-93 345.5 308 61.4
Hma1.2p1_1404F.1_g281300 Hydrangea macrophylla HOM05D003586 ORTHO05D004036 4.3e-93 345.5 307 59.3
TAR375G0563 Trochodendron aralioides HOM05D003586 ORTHO05D004036 2.1e-92 343.2 307 59.9
vmacro06834 Vaccinium macrocarpon HOM05D003586 ORTHO05D004036 2.1e-92 343.2 307 61.2
DCAR_027698 Daucus carota HOM05D003586 ORTHO05D004036 4.8e-92 342.0 308 58.4
Actinidia13607 Actinidia chinensis HOM05D003586 ORTHO05D004036 8.1e-92 341.3 306 59.2
Cfa013573 Carpinus fangiana HOM05D003586 ORTHO05D004036 2.4e-91 339.7 307 59.9
Haze_22192 Corylus avellana HOM05D003586 ORTHO05D004036 3.1e-91 339.3 307 59.3
CiPaw.07G185400 Carya illinoinensis HOM05D003586 ORTHO05D004036 5.3e-91 338.6 307 58.6
Thecc.03G149300 Theobroma cacao HOM05D003586 ORTHO05D004036 2.0e-90 336.7 305 58.7
Ciclev10004122m.g Citrus clementina HOM05D003586 ORTHO05D004036 2.9e-89 332.8 305 59.0
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 8.4e-89 331.3 305 57.0
Hma1.2p1_1404F.1_g281290 Hydrangea macrophylla HOM05D003586 ORTHO05D004036 5.5e-88 328.6 340 53.5
TWI23G0434 Tripterygium wilfordii HOM05D003586 ORTHO05D004036 7.1e-88 328.2 307 57.3
Nn1g00886 Nelumbo nucifera HOM05D003586 ORTHO05D004036 2.1e-87 326.6 308 56.2
LjContig00272g0012466 Lotus japonicus HOM05D003586 ORTHO05D004036 3.5e-87 325.9 306 58.5
Gorai.001G050900 Gossypium raimondii HOM05D003586 ORTHO05D004036 6.0e-87 325.1 305 56.1
Gohir.A07G043301 Gossypium hirsutum HOM05D003586 ORTHO05D004036 1.0e-86 324.3 305 55.7
Gohir.D07G047701 Gossypium hirsutum HOM05D003586 ORTHO05D004036 1.3e-86 323.9 305 55.7
PSO675G9104 Papaver somniferum HOM05D003586 ORTHO05D004036 1.3e-86 323.9 305 53.1
MBI01_g47166_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 2.3e-86 323.2 307 56.4
PSO732G0142 Papaver somniferum HOM05D003586 ORTHO05D004036 3.0e-86 322.8 305 52.5
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 6.7e-86 321.6 311 55.9
Potri.003G151500 Populus trichocarpa HOM05D003586 ORTHO05D004036 6.7e-86 321.6 305 56.4
Duzib205G0263 Durio zibethinus HOM05D003586 ORTHO05D004036 2.5e-85 319.7 305 55.4
ClCG07G016940 Citrullus lanatus HOM05D003586 ORTHO05D004036 3.3e-85 319.3 305 54.1
Lalb_Chr04g0248471 Lupinus albus HOM05D003586 ORTHO05D004036 5.6e-85 318.5 306 56.5
Sabra03G0109700 Salix brachista HOM05D003586 ORTHO05D004036 5.6e-85 318.5 306 55.9
THA.LOC104811536 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 1.6e-84 317.0 307 54.7
Prupe.2G273000 Prunus persica HOM05D003586 ORTHO05D004036 3.7e-84 315.8 308 57.1
MBI05_g28033_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 4.8e-84 315.5 306 54.9
CsaV3_4G004170 Cucumis sativus L. HOM05D003586 ORTHO05D004036 6.2e-84 315.1 312 53.5
Sc20g0000680 Simmondsia chinensis HOM05D003586 ORTHO05D004036 8.2e-84 314.7 305 52.5
Sed0010855 Sechium edule HOM05D003586 ORTHO05D004036 1.1e-83 314.3 303 55.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.1e-83 314.3 306 55.6
RcHm_v2.0_Chr1g0373721 Rosa chinensis HOM05D003586 ORTHO05D004036 1.4e-83 313.9 308 56.8
Cpa.g.sc13.262 Carica papaya HOM05D003586 ORTHO05D004036 1.8e-83 313.5 305 56.1
Glyma.02G290200 Glycine max HOM05D003586 ORTHO05D004036 3.1e-83 312.8 306 54.9
arahy.Tifrunner.gnm1.ann1.DI5547 Arachis hypogaea HOM05D003586 ORTHO05D004036 4.0e-83 312.4 306 54.6
EL10Ac7g18161 Beta vulgaris HOM05D003586 ORTHO05D004036 4.0e-83 312.4 306 53.3
AUR62025663 Chenopodium quinoa HOM05D003586 ORTHO05D004036 5.3e-83 312.0 306 51.3
Lj8C46T11 Lonicera japonica HOM05D003586 ORTHO05D004036 9.0e-83 311.2 297 57.9
CANSAT56G2655 Cannabis sativa HOM05D003586 ORTHO05D004036 1.2e-82 310.8 307 55.4
Glyma.14G024600 Glycine max HOM05D003586 ORTHO05D004036 2.0e-82 310.1 306 54.9
unitig_62.g23920 Utricularia gibba HOM05D003586 ORTHO05D004036 3.4e-82 309.3 307 54.4
arahy.Tifrunner.gnm1.ann1.1899LM Arachis hypogaea HOM05D003586 ORTHO05D004036 7.6e-82 308.1 306 53.9
PGR042G0622 Punica granatum HOM05D003586 ORTHO05D004036 7.6e-82 308.1 306 55.2
Eucgr.A02921 Eucalyptus grandis HOM05D003586 ORTHO05D004036 1.0e-81 307.8 309 54.0
Ah.08g217720 Amaranthus hybridus HOM05D003586 ORTHO05D004036 1.3e-81 307.4 307 53.7
Manes.14G038400 Manihot esculenta HOM05D003586 ORTHO05D004036 1.3e-81 307.4 305 54.1
AUR62001342 Chenopodium quinoa HOM05D003586 ORTHO05D004036 1.7e-81 307.0 306 50.7
FvH4_7g26990 Fragaria vesca HOM05D003586 ORTHO05D004036 2.9e-81 306.2 307 55.7
FAN06G2502 Fragaria x ananassa HOM05D003586 ORTHO05D004036 2.9e-81 306.2 307 55.7
FAN10G2285 Fragaria x ananassa HOM05D003586 ORTHO05D004036 3.8e-81 305.8 308 55.2
FAN03G1177 Fragaria x ananassa HOM05D003586 ORTHO05D004036 4.9e-81 305.4 308 55.2
Hund18595 Selenicereus undatus HOM05D003586 ORTHO05D004036 6.5e-81 305.1 307 50.2
FAN01G1639 Fragaria x ananassa HOM05D003586 ORTHO05D004036 8.4e-81 304.7 308 55.2
Lsat_1_v5_gn_8_9561 Lactuca sativa HOM05D003586 ORTHO05D004036 8.4e-81 304.7 311 52.1
Phvul.008G266400 Phaseolus vulgaris HOM05D003586 ORTHO05D004036 2.5e-80 303.1 306 53.9
Psat2g013320 Pisum sativum HOM05D003586 ORTHO05D004036 3.2e-80 302.8 306 53.6
AL3G17560 Arabidopsis lyrata HOM05D003586 ORTHO05D004036 4.2e-80 302.4 308 53.6
Aqoxy7G00839 Aquilegia oxysepala HOM05D003586 ORTHO05D004036 9.3e-80 301.2 307 54.1
BraA03t12653Z Brassica rapa HOM05D003586 ORTHO05D004036 1.2e-79 300.8 308 52.9
MD07G1249300 Malus domestica HOM05D003586 ORTHO05D004036 1.2e-79 300.8 308 55.5
A03p34730 Brassica napus HOM05D003586 ORTHO05D004036 2.1e-79 300.1 308 52.6
Carub.0003s0599 Capsella rubella HOM05D003586 ORTHO05D004036 3.5e-79 299.3 309 53.1
HanXRQChr05g0139491 Helianthus annuus HOM05D003586 ORTHO05D004036 3.5e-79 299.3 306 52.9
Sp3g05470 Schrenkiella parvula HOM05D003586 ORTHO05D004036 3.5e-79 299.3 308 52.6
C03p42210 Brassica napus HOM05D003586 ORTHO05D004036 7.9e-79 298.1 308 51.9
Ca_26483_v3 Cicer arietinum L. HOM05D003586 ORTHO05D004036 1.3e-78 297.4 306 53.6
CARHR081080 Cardamine hirsuta HOM05D003586 ORTHO05D004036 1.1e-77 294.3 307 53.7
Thhalv10019871m.g Eutrema salsugineum HOM05D003586 ORTHO05D004036 1.9e-77 293.5 309 52.4
ATR0057G101 Amborella trichopoda HOM05D003586 ORTHO05D004036 3.3e-77 292.7 310 50.0
BolC3t16501H Brassica oleracea HOM05D003586 ORTHO05D004036 4.3e-77 292.4 308 51.6
C05p60700 Brassica napus HOM05D003586 ORTHO05D004036 9.7e-77 291.2 308 51.0
AT3G06530 Arabidopsis thaliana HOM05D003586 ORTHO05D004036 1.3e-76 290.8 306 53.6
A05p41500 Brassica napus HOM05D003586 ORTHO05D004036 2.8e-76 289.7 308 50.6
BolC5t34730H Brassica oleracea HOM05D003586 ORTHO05D004036 2.8e-76 289.7 308 50.6
BraA05t22871Z Brassica rapa HOM05D003586 ORTHO05D004036 2.8e-76 289.7 308 50.6
MBI13_g48198_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 2.0e-74 283.5 273 55.7
Aa31LG5G17060 Aethionema arabicum HOM05D003586 ORTHO05D004036 7.7e-74 281.6 307 50.5
Medtr5g092370 Medicago truncatula HOM05D003586 ORTHO05D004036 1.1e-67 261.2 312 49.7
Zm00001eb123540 Zea mays HOM05D003586 ORTHO05D004036 1.4e-67 260.8 306 44.4
HPP92_014934 Vanilla planifolia HOM05D003586 ORTHO05D004036 2.0e-66 256.9 303 46.9
SHI14045 Sapria himalayana HOM05D003586 ORTHO05D004036 5.9e-66 255.4 308 46.1
CDE04G1406 Ceratophyllum demersum HOM05D003586 ORTHO05D004036 9.4e-64 248.1 294 47.6
MBI01_g24305_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 6.3e-60 235.3 240 55.4
MBI13_g42134_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 4.2e-56 222.6 221 56.1
Mapoly0043s0008 Marchantia polymorpha HOM05D003586 ORTHO05D004036 4.4e-53 212.6 311 39.2
MBI01_g30817_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 2.6e-50 203.4 305 40.3
MBI01_g47186_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 7.7e-50 201.8 283 42.8
Pp3c3_10580 Physcomitrium patens HOM05D003586 ORTHO05D004036 2.7e-42 176.8 309 32.7
AagrBONN_evm.TU.Sc2ySwM_344.3595 Anthoceros agrestis HOM05D003586 ORTHO05D004036 4.5e-42 176.0 307 33.9
SMO358G0582 Selaginella moellendorffii HOM05D003586 ORTHO05D004036 5.9e-42 175.6 305 36.4
CBR_g19186 Chara braunii HOM05D003586 ORTHO05D004036 2.7e-39 166.8 322 31.7
MBI01_g18557_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 2.8e-36 156.8 137 55.5
MBI13_g19469_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 5.5e-32 142.5 153 46.4
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 3.6e-31 139.8 238 42.0
MBI01_g47337_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 6.6e-25 119.0 193 43.5
MBI01_g18556_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 3.6e-23 113.2 161 48.4
MBI05_g26488_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 6.1e-23 112.5 172 44.2
Cre12.g548000 Chlamydomonas reinhardtii HOM05D003586 ORTHO05D004036 1.9e-16 90.9 210 31.4
SHI14048 Sapria himalayana HOM05D003586 ORTHO05D004036 5.6e-16 89.4 96 39.6
Psat1g036520 Pisum sativum HOM05D003586 ORTHO05D004036 2.8e-15 87.0 122 44.3
Psat1g100680 Pisum sativum HOM05D003266 ORTHO05D003718 1.7e-12 77.8 124 41.9
MCO07G739 Micromonas commoda HOM05D003586 ORTHO05D004036 2.1e-07 60.8 342 22.5
Medtr5g092290 Medicago truncatula HOM05D003586 ORTHO05D004036 2.8e-07 60.5 80 47.5
Aa31LG5G17080 Aethionema arabicum HOM05D003586 ORTHO05D004036 3.6e-07 60.1 54 57.4
THA.LOC104802945 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 1.8e-06 57.8 46 54.3


User provided reference genes

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