Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 2.4e-98 362.1 173 100.0
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 2.9e-59 232.3 172 70.3
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 5.5e-58 228.0 138 81.2
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 2.1e-54 216.1 173 65.9
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 9.0e-53 210.7 173 64.7
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 9.0e-53 210.7 173 64.7
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 5.8e-52 208.0 173 64.2
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 6.5e-51 204.5 173 64.7
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 8.4e-51 204.1 173 64.7
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 8.4e-51 204.1 174 63.8
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 8.4e-51 204.1 174 63.8
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 8.4e-51 204.1 174 63.8
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 1.1e-50 203.8 173 62.4
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.4e-50 203.4 174 62.1
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.2e-50 202.2 174 63.8
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.1e-50 201.1 173 63.6
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.6e-49 199.9 173 62.4
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 6.1e-49 198.0 173 61.8
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.0e-48 197.2 177 62.1
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.8e-48 196.4 163 65.0
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.8e-48 196.4 173 63.0
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 6.7e-48 194.5 176 61.9
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.3e-47 192.2 174 60.9
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 7.4e-47 191.0 179 60.9
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 9.7e-47 190.7 186 56.5
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.3e-46 190.3 174 61.5
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-46 190.3 173 61.3
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 2.2e-43 179.5 187 54.5
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 5.7e-39 164.9 160 58.1
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 5.7e-39 164.9 160 58.1
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.8e-37 159.8 160 56.9
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 2.0e-36 156.4 170 54.7
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.4e-36 155.6 94 80.9
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 5.9e-36 154.8 163 54.6
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 5.5e-34 148.3 135 60.7
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 1.4e-32 143.7 133 60.2
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.7e-27 126.7 129 55.8
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 1.7e-27 126.7 141 52.5
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 1.7e-27 126.7 141 52.5
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 1.7e-27 126.7 141 52.5
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 1.7e-27 126.7 141 52.5
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.8e-27 125.6 129 55.8
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.9e-26 123.2 122 59.8
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 8.8e-24 114.4 105 64.8
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 3.3e-23 112.5 77 74.0
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.5e-23 111.3 135 50.4
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 3.1e-21 105.9 72 76.4
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.6e-20 103.6 167 41.3
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 5.9e-20 101.7 77 70.1
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.9e-19 99.4 78 66.7
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 9.4e-18 94.4 60 70.0
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.6e-17 92.4 85 62.4
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.7e-14 83.6 96 53.1
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 3.7e-14 82.4 82 50.0
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.7e-14 82.4 85 56.5
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 8.3e-14 81.3 60 65.0
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 8.3e-14 81.3 60 65.0
Oeu030838.1 Olea europaea HOM05D030795 ORTHO05D025894 1.4e-13 80.5 37 97.3
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 1.8e-13 80.1 82 48.8
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 7.0e-13 78.2 49 73.5
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-12 77.0 58 72.4
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 5.9e-12 75.1 91 50.5
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 2.9e-11 72.8 75 54.7
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 4.2e-10 68.9 49 71.4
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 8.0e-09 64.7 41 73.2
SHI26877 Sapria himalayana HOM05D030795 ORTHO05D025894 8.0e-09 64.7 37 81.1
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 6.8e-08 61.6 36 75.0
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 8.8e-08 61.2 35 77.1
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.6e-07 59.7 37 67.6
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 2.6e-07 59.7 39 74.4
Nitab4.5_0001152g0060 Nicotiana tabacum HOM05D030795 ORTHO05D025894 4.4e-07 58.9 37 73.0


User provided reference genes

Program Settings