Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 0.0e+00 1851.6 953 100.0
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 0.0e+00 1372.1 946 74.1
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 0.0e+00 1358.6 951 71.8
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 0.0e+00 1318.5 954 71.6
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 0.0e+00 1310.8 957 70.0
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1302.7 952 70.1
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 0.0e+00 1301.2 952 70.0
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 0.0e+00 1297.3 944 69.2
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 0.0e+00 1276.5 951 68.0
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 0.0e+00 1274.6 953 68.9
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 0.0e+00 1262.7 967 66.4
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 0.0e+00 1244.2 947 67.1
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1233.4 940 67.0
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 0.0e+00 1230.3 941 66.2
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 0.0e+00 1228.4 938 67.3
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 0.0e+00 1219.1 940 67.1
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 0.0e+00 1215.7 936 66.3
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 0.0e+00 1209.1 936 66.5
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 0.0e+00 1192.2 947 63.3
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1189.5 946 63.3
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 0.0e+00 1187.2 942 63.4
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 0.0e+00 1183.3 952 62.9
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 0.0e+00 1178.7 954 62.9
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 0.0e+00 1174.8 951 62.6
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1174.5 946 62.6
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 0.0e+00 1174.1 958 61.6
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1173.3 953 62.3
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 0.0e+00 1171.8 953 62.2
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 0.0e+00 1171.8 946 62.7
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 0.0e+00 1167.5 952 63.0
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 0.0e+00 1165.6 943 62.2
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 0.0e+00 1161.0 954 61.6
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 0.0e+00 1155.6 960 61.7
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 0.0e+00 1153.3 957 61.9
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 0.0e+00 1152.9 947 61.8
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 0.0e+00 1151.3 953 62.6
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 0.0e+00 1151.3 938 62.0
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 0.0e+00 1147.9 944 61.4
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 0.0e+00 1141.7 953 61.9
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 0.0e+00 1139.4 953 62.0
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 0.0e+00 1138.6 942 61.5
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 0.0e+00 1137.5 938 62.4
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 0.0e+00 1135.6 942 61.3
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 0.0e+00 1134.4 950 62.2
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 0.0e+00 1134.0 947 61.8
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 0.0e+00 1132.9 958 61.2
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 0.0e+00 1124.4 954 60.6
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 0.0e+00 1121.3 937 60.2
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 0.0e+00 1119.8 950 60.0
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 0.0e+00 1119.0 948 60.7
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 0.0e+00 1114.4 943 60.7
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 0.0e+00 1112.4 944 60.6
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 0.0e+00 1109.7 943 60.1
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 0.0e+00 1109.0 942 61.1
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 0.0e+00 1107.8 1000 59.6
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 0.0e+00 1104.7 952 58.9
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 0.0e+00 1104.4 940 60.3
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 0.0e+00 1099.7 943 60.1
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 0.0e+00 1097.4 946 59.8
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 0.0e+00 1094.0 949 59.7
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 0.0e+00 1090.5 940 59.4
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 0.0e+00 1090.5 940 59.4
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 0.0e+00 1090.1 940 59.5
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 0.0e+00 1090.1 952 59.0
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 0.0e+00 1089.3 939 59.9
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 0.0e+00 1088.6 957 57.9
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 0.0e+00 1083.9 948 59.0
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 0.0e+00 1080.5 937 59.6
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 6.5e-312 1073.5 935 60.6
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 3.3e-311 1071.6 919 58.8
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 3.3e-311 1071.6 941 58.4
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 1.4e-309 1066.2 922 58.5
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 6.0e-308 1060.8 957 58.1
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 4.3e-306 1054.7 856 63.6
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 7.4e-306 1053.9 941 58.7
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 2.5e-301 1038.9 827 63.2
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 3.2e-301 1038.5 771 67.6
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 1.3e-299 1033.1 915 59.5
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 3.0e-299 1031.9 962 57.3
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 8.7e-299 1030.4 1003 55.2
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 6.3e-297 1024.2 952 57.5
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.7e-294 1016.1 952 57.0
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 8.7e-291 1003.8 947 56.1
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 2.0e-282 976.1 946 54.8
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 2.2e-270 936.0 685 69.6
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 8.5e-270 934.1 693 69.0
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 6.1e-268 927.9 811 58.7
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 2.2e-262 909.4 858 54.5
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 2.6e-258 896.0 739 62.9
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 4.8e-257 891.7 834 54.0
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 1.1e-237 827.4 940 48.1
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 2.0e-218 763.5 957 45.8
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 1.3e-214 750.7 662 59.7
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 2.9e-193 679.9 978 42.4
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 2.4e-187 660.2 878 43.2
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 2.0e-178 630.6 956 38.7
Lalb_Chr03g0040541 Lupinus albus HOM05D004953 ORTHO05D006193 1.7e-169 600.9 487 60.6
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 5.2e-150 536.2 886 36.6
Actinidia33395 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.2e-148 530.8 409 65.5
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 2.0e-141 507.7 745 41.1
Pp3c2_410 Physcomitrium patens HOM05D004953 ORTHO05D006193 3.7e-140 503.4 904 35.0
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.4e-139 500.7 424 63.0
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 3.5e-138 496.9 471 60.5
Mapoly0032s0035 Marchantia polymorpha HOM05D004953 ORTHO05D006193 5.9e-138 496.1 916 33.3
Glyma.09G246350 Glycine max HOM05D004953 ORTHO05D006193 4.7e-135 486.5 422 57.3
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 9.2e-123 445.7 454 55.3
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.2e-101 375.6 424 50.5
Actinidia12854 Actinidia chinensis HOM05D004953 ORTHO05D006193 5.2e-94 350.1 264 66.3
FAN15G1853 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.1e-67 262.7 198 61.6
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 2.1e-42 178.7 331 36.3
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.0e-42 176.8 337 35.6
Actinidia23343 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.5e-40 172.6 139 62.6
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 3.7e-39 167.9 463 29.4
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.0e-33 149.8 347 31.7
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 4.8e-31 141.0 131 58.0
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 3.8e-28 131.3 119 58.8
Actinidia29995 Actinidia chinensis HOM05D004953 ORTHO05D006193 3.2e-27 128.3 254 36.6
MCO15G701 Micromonas commoda HOM05D004953 ORTHO05D006193 1.3e-23 116.3 926 22.9
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.8e-22 112.5 131 51.9
TAR365G0721 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.7e-21 108.6 146 45.9
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 6.6e-20 104.0 113 47.8
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 8.6e-20 103.6 136 45.6
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.6e-20 103.6 73 63.0
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 2.5e-19 102.1 73 63.0
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 3.3e-19 101.7 73 61.6
FvH4_7g13151 Fragaria vesca HOM05D004953 ORTHO05D006193 3.3e-19 101.7 68 70.6
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 1.2e-18 99.8 73 60.3
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 2.1e-18 99.0 73 60.3
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.4e-14 86.3 61 62.3
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 9.2e-14 83.6 61 62.3
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 1.6e-13 82.8 91 51.6
CSS0036997 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.0e-12 80.1 67 64.2
FvH4_4g15182 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-12 80.1 46 78.3
CSS0040358 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.5e-11 76.3 67 64.2
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 7.3e-11 73.9 55 56.4
Pp3c19_1150 Physcomitrium patens HOM05D004953 ORTHO05D006193 1.6e-10 72.8 83 44.6
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.7e-10 71.2 55 54.5
SMO203G0177 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 1.0e-09 70.1 147 32.7
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.8e-09 69.3 55 52.7
SMO203G0202 Selaginella moellendorffii HOM05D003498 ORTHO05D006193 2.0e-08 65.9 70 48.6
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.3e-07 60.5 59 61.0


User provided reference genes

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