Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 5.7e-166 587.4 279 100.0
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 5.8e-110 401.4 273 67.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 1.3e-106 390.2 266 65.0
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 1.5e-105 386.7 276 64.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.5e-105 386.7 266 65.0
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 9.6e-105 384.0 266 63.9
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.5e-102 376.7 262 64.5
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 4.5e-102 375.2 257 65.8
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 2.2e-101 372.9 275 62.2
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 1.4e-100 370.2 273 62.3
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.9e-100 369.8 257 64.6
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.9e-100 369.8 266 63.5
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.3e-98 362.8 266 60.2
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 8.7e-98 360.9 266 63.2
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.5e-97 360.1 266 62.0
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 2.5e-97 359.4 267 62.9
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 5.6e-97 358.2 252 65.1
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 9.6e-97 357.5 266 62.0
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 9.6e-97 357.5 266 61.3
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 9.6e-97 357.5 257 64.6
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 8.1e-96 354.4 268 61.2
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 9.0e-95 350.9 268 58.6
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 9.0e-95 350.9 266 59.8
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 9.0e-95 350.9 266 62.4
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.5e-94 350.1 266 60.5
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 2.0e-94 349.7 261 60.5
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 5.8e-94 348.2 273 58.6
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 7.6e-94 347.8 274 58.8
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.4e-92 343.6 272 57.7
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.4e-92 343.6 272 57.7
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.4e-92 343.6 272 57.0
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 2.5e-92 342.8 271 56.8
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.1e-92 341.3 279 58.1
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 7.1e-92 341.3 269 55.4
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 1.6e-91 340.1 267 57.7
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 7.9e-91 337.8 250 62.4
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.3e-90 337.0 262 59.2
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.8e-90 336.7 267 57.7
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.8e-90 336.7 266 56.8
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 8.7e-90 334.3 261 55.9
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.1e-89 334.0 266 57.1
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 9.6e-89 330.9 243 60.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.1e-87 325.9 253 57.3
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.6e-86 322.8 266 55.3
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 3.4e-86 322.4 270 56.3
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 7.6e-86 321.2 256 59.0
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.1e-83 313.2 212 65.6
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 6.1e-83 311.6 268 56.0
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 7.9e-83 311.2 250 58.0
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.3e-82 310.5 226 61.5
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 1.3e-82 310.5 229 64.2
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.3e-82 309.7 258 51.9
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 5.7e-81 305.1 270 53.7
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.6e-80 303.5 269 50.9
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.2e-80 303.1 252 58.3
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 7.7e-78 294.7 266 52.3
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.0e-77 294.3 258 50.8
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.4e-76 290.4 210 61.4
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 2.3e-74 283.1 223 58.3
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.3e-72 277.3 267 51.7
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 4.8e-72 275.4 272 46.3
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.6e-70 269.6 240 54.2
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.3e-64 250.8 271 45.4
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.1e-63 247.7 253 43.9
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 1.3e-61 240.7 334 42.8
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 8.5e-61 238.0 192 54.2
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 2.5e-60 236.5 228 50.4
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 2.1e-59 233.4 224 50.4
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.4e-58 230.7 213 51.2
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 2.7e-54 216.5 228 49.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.2e-53 213.4 254 37.4
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 4.2e-52 209.1 194 54.1
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 2.3e-50 203.4 262 37.4
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 3.0e-50 203.0 250 35.6
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 8.3e-40 168.3 141 56.7
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 4.6e-22 109.4 348 25.9
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.0e-21 108.2 87 55.2
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.5e-20 104.4 83 57.8
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 9.5e-20 101.7 178 36.5
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.9e-12 77.4 47 66.0
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.7e-08 64.3 60 53.3
Zm00001eb340470 Zea mays HOM05D007847 ORTHO05D009946 7.8e-06 55.5 58 43.1


User provided reference genes

Program Settings