Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 2.7e-186 655.2 335 100.0
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 8.1e-151 537.3 339 81.7
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 7.1e-147 524.2 334 77.8
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 2.5e-139 499.2 314 79.6
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 1.6e-130 469.9 336 71.4
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 2.7e-130 469.2 335 70.7
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.6e-130 468.8 341 69.8
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.6e-130 468.8 341 69.8
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 3.6e-130 468.8 339 70.8
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 4.6e-130 468.4 339 70.5
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.8e-129 466.5 339 70.2
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 6.7e-129 464.5 339 69.9
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.1e-128 463.8 339 69.9
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 1.3e-127 460.3 344 68.3
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 2.2e-127 459.5 334 68.3
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 1.1e-126 457.2 341 68.6
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 1.2e-125 453.8 341 69.8
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 4.5e-125 451.8 333 67.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 2.2e-124 449.5 335 67.8
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 4.2e-123 445.3 335 66.3
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 7.2e-123 444.5 318 71.4
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 7.9e-122 441.0 337 65.6
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 6.7e-121 438.0 332 65.7
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 3.3e-120 435.6 345 64.1
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 2.2e-119 433.0 341 63.0
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 1.4e-118 430.3 337 64.7
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 2.4e-118 429.5 337 63.8
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 5.3e-118 428.3 344 64.0
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 5.3e-118 428.3 335 67.2
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 7.0e-118 427.9 337 63.5
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 9.1e-118 427.6 330 64.8
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 1.6e-117 426.8 320 65.9
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 2.6e-117 426.0 346 62.4
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.5e-117 425.2 340 63.2
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 5.9e-117 424.9 338 63.0
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 7.7e-117 424.5 336 67.0
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 1.3e-116 423.7 330 63.6
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 6.5e-116 421.4 319 65.8
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 8.5e-116 421.0 337 65.3
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 8.5e-116 421.0 340 63.8
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.9e-115 419.9 337 61.7
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 5.5e-115 418.3 339 62.5
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 7.2e-115 417.9 319 66.1
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 7.2e-115 417.9 342 63.7
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.2e-114 417.2 343 61.8
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 2.7e-114 416.0 327 65.1
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.7e-114 416.0 321 64.2
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 3.6e-114 415.6 324 65.1
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 6.1e-114 414.8 338 62.7
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 6.1e-114 414.8 333 62.2
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 8.0e-114 414.5 315 66.0
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.8e-113 413.3 341 62.2
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 2.3e-113 412.9 315 66.3
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 2.3e-113 412.9 333 62.5
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 2.3e-113 412.9 328 63.4
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 3.0e-113 412.5 333 62.2
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 4.0e-113 412.1 339 62.2
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.0e-113 412.1 328 63.1
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.0e-113 412.1 328 63.1
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.2e-113 411.8 328 62.8
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 8.8e-113 411.0 331 63.1
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 8.8e-113 411.0 336 61.9
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.6e-112 409.5 328 62.5
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.3e-112 409.1 328 62.5
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 7.5e-112 407.9 336 61.6
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 7.5e-112 407.9 320 62.5
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.7e-111 406.8 336 61.6
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 6.3e-111 404.8 330 62.4
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 6.3e-111 404.8 326 63.5
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 6.3e-111 404.8 313 64.9
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-110 404.1 326 62.3
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.1e-110 404.1 326 62.3
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 1.1e-110 404.1 338 61.5
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 1.4e-110 403.7 345 59.1
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.4e-110 403.7 345 58.8
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.4e-110 403.7 333 61.0
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 1.8e-110 403.3 345 58.8
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 1.8e-110 403.3 312 64.4
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.8e-110 403.3 339 60.5
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 2.4e-110 402.9 340 59.4
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 3.1e-110 402.5 342 58.8
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 4.1e-110 402.1 340 60.0
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 5.3e-110 401.7 332 61.1
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 7.0e-110 401.4 339 59.6
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 9.1e-110 401.0 340 59.1
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 9.1e-110 401.0 342 58.8
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 2.0e-109 399.8 339 59.3
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.7e-109 399.4 337 59.9
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 5.9e-109 398.3 345 58.0
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 5.9e-109 398.3 331 60.7
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 5.9e-109 398.3 332 60.2
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.0e-108 397.5 346 59.8
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 5.0e-108 395.2 345 58.3
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 5.0e-108 395.2 343 59.2
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 7.2e-107 391.3 345 57.4
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.1e-106 389.8 313 61.7
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.1e-106 389.8 264 74.2
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.7e-106 389.4 333 60.4
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 2.7e-106 389.4 318 61.3
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 6.1e-106 388.3 374 54.5
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 2.3e-105 386.3 331 59.5
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 6.8e-105 384.8 319 61.4
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 8.8e-105 384.4 317 60.9
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.5e-104 383.6 315 60.6
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.3e-103 380.6 341 56.3
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 4.8e-103 378.6 318 60.4
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.0e-100 370.9 340 57.1
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 2.3e-97 359.8 317 55.5
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 1.5e-96 357.1 252 69.0
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 2.9e-92 342.8 286 59.1
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 8.6e-84 314.7 335 46.9
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 6.2e-82 308.5 369 44.2
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 1.4e-78 297.4 330 48.8
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 1.8e-65 253.8 338 40.5
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 9.9e-64 248.1 221 57.0
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 3.2e-62 243.0 180 66.1
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 2.1e-61 240.4 238 53.8
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 6.0e-61 238.8 184 62.5
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 6.0e-61 238.8 184 62.5
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 1.7e-60 237.3 157 73.9
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 9.9e-56 221.5 143 81.8
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 3.0e-52 209.9 313 38.0
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 6.9e-49 198.7 142 68.3
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 4.5e-48 196.1 150 64.0
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 1.6e-45 187.6 292 43.5
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 3.3e-43 179.9 340 32.6
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 2.1e-37 160.6 126 62.7
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 7.9e-37 158.7 99 78.8
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 2.5e-35 153.7 123 65.9
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 5.6e-35 152.5 97 76.3
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 7.4e-35 152.1 123 61.0
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 1.3e-34 151.4 97 75.3
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 3.7e-34 149.8 97 74.2
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 3.7e-34 149.8 97 74.2
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 1.4e-33 147.9 121 60.3
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 3.4e-32 143.3 292 30.1
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 6.5e-31 139.0 205 40.0
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 1.6e-29 134.4 340 29.1
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.6e-29 134.4 171 43.9
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 4.6e-29 132.9 99 58.6
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 6.3e-26 122.5 83 72.3
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 6.3e-26 122.5 83 72.3
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.6e-24 117.1 164 38.4
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 2.6e-24 117.1 167 41.3
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.9e-22 110.9 131 48.1
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 3.0e-20 103.6 133 44.4
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 3.9e-20 103.2 88 61.4
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 2.5e-19 100.5 114 46.5
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 2.8e-18 97.1 121 46.3
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 1.0e-15 88.6 100 50.0
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 5.1e-12 76.3 43 83.7
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 2.8e-10 70.5 47 70.2
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 1.2e-08 65.1 114 37.7
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 7.7e-08 62.4 54 55.6


User provided reference genes

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