Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 4.6e-208 727.6 361 100.0
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 8.9e-119 431.0 349 65.3
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 7.2e-36 155.6 372 36.3
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 7.2e-36 155.6 325 36.6
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 1.8e-34 151.0 334 35.0
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 3.0e-34 150.2 331 35.3
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 3.0e-34 150.2 324 35.2
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 6.7e-34 149.1 324 34.9
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 3.3e-33 146.7 318 34.9
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 4.4e-33 146.4 350 33.1
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 9.7e-33 145.2 323 31.9
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 9.7e-33 145.2 321 34.9
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 2.2e-32 144.1 370 33.0
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 4.8e-32 142.9 403 32.3
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 3.1e-31 140.2 365 33.2
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.1e-31 139.8 333 32.7
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 5.3e-31 139.4 317 33.8
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 7.0e-31 139.0 384 31.2
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 9.1e-31 138.7 375 33.6
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 9.1e-31 138.7 335 33.1
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 1.2e-30 138.3 380 33.2
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.7e-30 135.6 387 32.8
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.7e-30 135.6 386 31.9
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.7e-29 134.4 379 31.7
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 6.5e-29 132.5 380 30.3
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 8.5e-29 132.1 324 34.9
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 8.5e-29 132.1 387 33.1
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 8.5e-29 132.1 276 33.3
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 1.1e-28 131.7 342 31.6
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.5e-28 131.3 358 31.8
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.9e-28 131.0 387 31.3
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 1.6e-27 127.9 379 31.7
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 8.0e-27 125.6 314 33.4
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 1.4e-26 124.8 323 31.6
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 2.3e-26 124.0 317 36.0
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 6.7e-26 122.5 322 33.5
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 2.0e-25 120.9 361 29.9
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 2.6e-25 120.6 352 31.2
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 5.7e-25 119.4 346 31.2
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 7.5e-25 119.0 358 28.5
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 2.2e-24 117.5 357 31.1
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 6.3e-24 115.9 392 28.1
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 1.1e-23 115.2 313 31.6
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 1.1e-23 115.2 175 38.3
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 1.1e-23 115.2 175 38.3
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 3.1e-23 113.6 287 30.3
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 3.1e-23 113.6 408 28.4
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 5.3e-23 112.8 379 30.3
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 7.0e-23 112.5 324 31.2
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 2.7e-22 110.5 392 27.0
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 5.9e-22 109.4 305 33.4
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.0e-21 108.6 374 29.4
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 1.5e-20 104.8 319 29.5
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 1.5e-20 104.8 319 29.5
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 2.5e-20 104.0 324 29.3
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 5.5e-20 102.8 333 28.5
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 2.7e-19 100.5 322 29.8
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 2.7e-19 100.5 319 30.1
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 4.7e-19 99.8 365 27.4
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 6.1e-19 99.4 323 31.0
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 8.0e-19 99.0 269 33.1
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 1.0e-18 98.6 361 29.6
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 1.8e-18 97.8 322 30.1
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 3.0e-18 97.1 375 26.9
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 8.8e-18 95.5 351 28.5
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 1.5e-17 94.7 193 34.7
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 7.5e-17 92.4 218 36.7
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 1.1e-15 88.6 107 49.5
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 1.4e-15 88.2 310 29.0
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 1.4e-15 88.2 327 29.1
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 1.8e-15 87.8 251 30.7
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 2.4e-15 87.4 344 27.3
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 4.1e-15 86.7 324 26.9
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 1.2e-14 85.1 425 23.8
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 4.5e-14 83.2 356 26.1
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 1.0e-13 82.0 309 26.5
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 1.0e-13 82.0 386 27.5
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 1.0e-13 82.0 324 30.6
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 1.3e-13 81.6 318 30.2
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 1.7e-13 81.3 317 31.2
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 1.9e-12 77.8 266 28.9
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 1.9e-12 77.8 245 33.5
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 3.2e-12 77.0 320 30.0
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 4.2e-12 76.6 318 28.6
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 5.5e-12 76.3 306 26.8
Peaxi162Scf00220g00314 Petunia axillaris HOM05D007266 ORTHO05D005982 2.8e-11 73.9 245 28.2
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 4.7e-11 73.2 305 28.5
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 4.7e-11 73.2 323 28.8
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 4.7e-11 73.2 323 28.8
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 4.7e-11 73.2 283 29.7
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 6.1e-11 72.8 400 25.2
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 8.0e-11 72.4 321 28.0
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 8.0e-11 72.4 316 29.4
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 2.3e-10 70.9 187 31.6
Lj3g0005568 Lotus japonicus HOM05D007266 ORTHO05D005982 2.3e-10 70.9 246 29.7
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 3.0e-10 70.5 321 27.7
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.0e-10 70.1 147 38.1
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 5.2e-10 69.7 281 27.0
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 6.8e-10 69.3 310 28.4
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 8.8e-10 68.9 316 27.8
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 8.8e-10 68.9 173 36.4
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 1.2e-09 68.6 316 28.2
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 1.2e-09 68.6 316 28.2
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 1.2e-09 68.6 316 28.2
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 1.2e-09 68.6 319 29.8
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 1.5e-09 68.2 314 28.0
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 4.4e-09 66.6 311 28.9
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 4.4e-09 66.6 315 28.9
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 5.7e-09 66.2 315 26.7
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 5.7e-09 66.2 214 31.3
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 7.5e-09 65.9 314 27.7
AT5G06980 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 1.3e-08 65.1 258 29.8
BcaB04g18684 Brassica carinata HOM05D008873 ORTHO05D005982 1.3e-08 65.1 127 36.2
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 1.3e-08 65.1 105 46.7
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 1.3e-08 65.1 105 46.7
Zm00001eb018850 Zea mays HOM05D003662 ORTHO05D001824 1.3e-08 65.1 313 25.9
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 2.2e-08 64.3 87 48.3
Prupe.8G062200 Prunus persica HOM05D003662 ORTHO05D001824 2.8e-08 63.9 154 33.8
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 6.3e-08 62.8 318 28.3
PSO781G0010 Papaver somniferum HOM05D003662 ORTHO05D001824 1.1e-07 62.0 308 26.3
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.1e-07 62.0 214 29.9
Solyc01g096620.4 Solanum lycopersicum HOM05D007266 ORTHO05D005982 1.1e-07 62.0 204 27.5
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 1.8e-07 61.2 219 30.6
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 1.8e-07 61.2 313 28.8
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 2.4e-07 60.8 313 28.8
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 2.4e-07 60.8 346 28.6
Lalb_Chr10g0097751 Lupinus albus HOM05D003662 ORTHO05D001824 2.4e-07 60.8 147 32.7
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 3.1e-07 60.5 116 34.5
Duzib052G1087 Durio zibethinus HOM05D003662 ORTHO05D001824 5.4e-07 59.7 178 29.8
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 7.0e-07 59.3 309 28.8
Pp3c3_2690 Physcomitrium patens HOM05D004414 ORTHO05D001824 7.0e-07 59.3 173 29.5
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 9.2e-07 58.9 311 28.0
Aqoxy1G00397_Aqoxy1G00398 Aquilegia oxysepala HOM05D007266 ORTHO05D005982 1.2e-06 58.5 110 37.3
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 1.2e-06 58.5 309 28.8
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 1.6e-06 58.2 117 36.8
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 2.0e-06 57.8 314 24.5
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 2.0e-06 57.8 95 41.1
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 2.0e-06 57.8 128 34.4
Pp3c13_6620 Physcomitrium patens HOM05D004414 ORTHO05D001824 2.0e-06 57.8 127 35.4
AL8G41440 Arabidopsis lyrata HOM05D003662 ORTHO05D001824 4.5e-06 56.6 268 27.6
Lalb_Chr01g0007431 Lupinus albus HOM05D007266 ORTHO05D005982 4.5e-06 56.6 157 33.8
Sp2g27230 Schrenkiella parvula HOM05D003662 ORTHO05D001824 4.5e-06 56.6 132 34.1
ECA234G0654 Erigeron canadensis HOM05D000867 ORTHO05D000864 5.9e-06 56.2 205 28.3
MSTRG.5266 Avicennia marina HOM05D003662 ORTHO05D001824 7.8e-06 55.8 129 32.6
BcaB07g29728 Brassica carinata HOM05D003662 ORTHO05D001824 7.8e-06 55.8 221 27.1
Carub.0008s2496 Capsella rubella HOM05D003662 ORTHO05D001824 7.8e-06 55.8 128 35.2
Phvul.006G206900 Phaseolus vulgaris HOM05D003662 ORTHO05D001824 7.8e-06 55.8 126 30.2


User provided reference genes

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